RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
SPRED1-201ENST00000299084 MAP3K9P80192 1104 aa17.24■□□□□ 0.35
SPRED1-201ENST00000299084 TSPYL1Q9H0U9 437 aa17.24■□□□□ 0.35
SPRED1-201ENST00000299084 PDILTQ8N807 584 aa17.24■□□□□ 0.35
SPRED1-201ENST00000299084 NAT10Q9H0A0 1025 aaKnown RBP17.23■□□□□ 0.35
SPRED1-201ENST00000299084 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
SPRED1-201ENST00000299084 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
SPRED1-201ENST00000299084 TTLL5Q6EMB2 1281 aa17.23■□□□□ 0.35
SPRED1-201ENST00000299084 CGNL1Q0VF96 1302 aa17.22■□□□□ 0.35
SPRED1-201ENST00000299084 CWC15Q9P013 229 aaKnown RBP17.22■□□□□ 0.35
SPRED1-201ENST00000299084 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
SPRED1-201ENST00000299084 REC8O95072 547 aa17.21■□□□□ 0.35
SPRED1-201ENST00000299084 TNIKQ9UKE5 1360 aa17.21■□□□□ 0.35
SPRED1-201ENST00000299084 FAM177BA6PVY3 158 aa17.21■□□□□ 0.35
SPRED1-201ENST00000299084 GNL3LQ9NVN8 582 aaKnown RBP17.21■□□□□ 0.35
SPRED1-201ENST00000299084 CCDC73Q6ZRK6 1079 aa17.21■□□□□ 0.35
SPRED1-201ENST00000299084 ERCC4Q92889 916 aaPredicted RBP17.21■□□□□ 0.34
SPRED1-201ENST00000299084 SMARCE1Q969G3 411 aa17.2■□□□□ 0.34
SPRED1-201ENST00000299084 CHMP4BP1P59074 171 aa17.2■□□□□ 0.34
SPRED1-201ENST00000299084 ERC2O15083 957 aa17.2■□□□□ 0.34
SPRED1-201ENST00000299084 ELL2O00472 640 aaPredicted RBP17.19■□□□□ 0.34
SPRED1-201ENST00000299084 HOMER2Q9NSB8 354 aa17.19■□□□□ 0.34
SPRED1-201ENST00000299084 SKOR2Q2VWA4 1001 aaPredicted RBP17.19■□□□□ 0.34
SPRED1-201ENST00000299084 ZHX3Q9H4I2 956 aa17.19■□□□□ 0.34
SPRED1-201ENST00000299084 HMGB2P26583 209 aaKnown RBP17.19■□□□□ 0.34
SPRED1-201ENST00000299084 TRAK1Q9UPV9 953 aa17.19■□□□□ 0.34
SPRED1-201ENST00000299084 IFT57Q9NWB7 429 aa17.18■□□□□ 0.34
SPRED1-201ENST00000299084 LUC7LQ9NQ29 371 aaKnown RBP17.18■□□□□ 0.34
SPRED1-201ENST00000299084 CECR2Q9BXF3 1484 aa17.18■□□□□ 0.34
SPRED1-201ENST00000299084 FILIP1LQ4L180 1135 aa17.18■□□□□ 0.34
SPRED1-201ENST00000299084 PLCD3Q8N3E9 789 aa17.17■□□□□ 0.34
SPRED1-201ENST00000299084 GOLGA6L10A6NI86 522 aa17.17■□□□□ 0.34
SPRED1-201ENST00000299084 TTLL12Q14166 644 aaPredicted RBP17.17■□□□□ 0.34
SPRED1-201ENST00000299084 SCLT1Q96NL6 688 aa17.17■□□□□ 0.34
SPRED1-201ENST00000299084 ZSCAN29Q8IWY8 852 aaPredicted RBP17.17■□□□□ 0.34
SPRED1-201ENST00000299084 ANAPC15P60006 121 aa17.17■□□□□ 0.34
SPRED1-201ENST00000299084 NUP155O75694 1391 aa17.17■□□□□ 0.34
SPRED1-201ENST00000299084 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
SPRED1-201ENST00000299084 KDM4AO75164 1064 aa17.16■□□□□ 0.34
SPRED1-201ENST00000299084 DYDC1Q8WWB3 177 aa17.16■□□□□ 0.34
SPRED1-201ENST00000299084 SMC3Q9UQE7 1217 aa17.16■□□□□ 0.34
SPRED1-201ENST00000299084 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
SPRED1-201ENST00000299084 UACAQ9BZF9 1416 aa17.16■□□□□ 0.34
SPRED1-201ENST00000299084 EVC2Q86UK5 1308 aa17.15■□□□□ 0.34
SPRED1-201ENST00000299084 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
SPRED1-201ENST00000299084 NUTM2EB1AL46 878 aaPredicted RBP17.15■□□□□ 0.34
SPRED1-201ENST00000299084 CA8P35219 290 aa17.15■□□□□ 0.34
SPRED1-201ENST00000299084 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
SPRED1-201ENST00000299084 ARHGAP35Q9NRY4 1499 aa17.14■□□□□ 0.33
SPRED1-201ENST00000299084 IPO9Q96P70 1041 aaKnown RBP17.14■□□□□ 0.33
SPRED1-201ENST00000299084 FKBP5Q13451 457 aaPredicted RBP17.14■□□□□ 0.33
SPRED1-201ENST00000299084 CLASRPQ8N2M8 674 aaKnown RBP17.14■□□□□ 0.33
SPRED1-201ENST00000299084 ABCC8Q09428 1581 aa17.14■□□□□ 0.33
SPRED1-201ENST00000299084 NINLQ9Y2I6 1382 aa17.13■□□□□ 0.33
SPRED1-201ENST00000299084 AXDND1Q5T1B0 1012 aaPredicted RBP17.13■□□□□ 0.33
SPRED1-201ENST00000299084 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
SPRED1-201ENST00000299084 CCDC181Q5TID7 509 aa17.13■□□□□ 0.33
SPRED1-201ENST00000299084 CCDC112Q8NEF3 446 aa17.13■□□□□ 0.33
SPRED1-201ENST00000299084 PPP4R3AQ6IN85 833 aa17.13■□□□□ 0.33
SPRED1-201ENST00000299084 ZNHIT6Q9NWK9 470 aaKnown RBP17.13■□□□□ 0.33
SPRED1-201ENST00000299084 ANKRD30AQ9BXX3 1397 aa17.13■□□□□ 0.33
SPRED1-201ENST00000299084 ZNF76P36508 570 aa17.13■□□□□ 0.33
SPRED1-201ENST00000299084 POTEJP0CG39 1038 aa17.12■□□□□ 0.33
SPRED1-201ENST00000299084 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
SPRED1-201ENST00000299084 WIZO95785 1651 aa17.12■□□□□ 0.33
SPRED1-201ENST00000299084 TXLNBQ8N3L3 684 aa17.12■□□□□ 0.33
SPRED1-201ENST00000299084 RRP7AQ9Y3A4 280 aaKnown RBP17.12■□□□□ 0.33
SPRED1-201ENST00000299084 GOLGA6L7A0A1B0GV03 622 aa17.12■□□□□ 0.33
SPRED1-201ENST00000299084 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
SPRED1-201ENST00000299084 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
SPRED1-201ENST00000299084 STIM1Q13586 685 aa17.11■□□□□ 0.33
SPRED1-201ENST00000299084 PABPN1LA6NDY0 278 aaKnown RBP17.11■□□□□ 0.33
SPRED1-201ENST00000299084 STAMBPO95630 424 aa17.11■□□□□ 0.33
SPRED1-201ENST00000299084 COMMD10Q9Y6G5 202 aa17.11■□□□□ 0.33
SPRED1-201ENST00000299084 PHLDB1Q86UU1 1377 aa17.11■□□□□ 0.33
SPRED1-201ENST00000299084 STRN4Q9NRL3 753 aa17.1■□□□□ 0.33
SPRED1-201ENST00000299084 TMOD2Q9NZR1 351 aa17.1■□□□□ 0.33
SPRED1-201ENST00000299084 DEF6Q9H4E7 631 aa17.1■□□□□ 0.33
SPRED1-201ENST00000299084 SSR1P43307 286 aaKnown RBP17.1■□□□□ 0.33
SPRED1-201ENST00000299084 LEKR1Q6ZMV7 388 aa17.1■□□□□ 0.33
SPRED1-201ENST00000299084 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
SPRED1-201ENST00000299084 BCCIPQ9P287 314 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPRED1-201ENST00000299084 CUX2O14529 1486 aa17.1■□□□□ 0.33
SPRED1-201ENST00000299084 PIP4K2AP48426 406 aaPredicted RBP17.09■□□□□ 0.33
SPRED1-201ENST00000299084 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
SPRED1-201ENST00000299084 SOGA3Q5TF21 947 aa17.09■□□□□ 0.33
SPRED1-201ENST00000299084 FEZ1Q99689 392 aa17.09■□□□□ 0.33
SPRED1-201ENST00000299084 CT47B1P0C2W7 299 aaPredicted RBP17.09■□□□□ 0.33
SPRED1-201ENST00000299084 PSMA5P28066 241 aa17.09■□□□□ 0.33
SPRED1-201ENST00000299084 TNIP1Q15025 636 aa17.09■□□□□ 0.33
SPRED1-201ENST00000299084 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
SPRED1-201ENST00000299084 CCDC91Q7Z6B0 441 aa17.09■□□□□ 0.33
SPRED1-201ENST00000299084 VGFO15240 615 aaPredicted RBP17.08■□□□□ 0.33
SPRED1-201ENST00000299084 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.33
SPRED1-201ENST00000299084 TSPYL4Q9UJ04 414 aa17.08■□□□□ 0.33
SPRED1-201ENST00000299084 NF2P35240 595 aa17.08■□□□□ 0.32
SPRED1-201ENST00000299084 RABEP1Q15276 862 aa17.08■□□□□ 0.32
SPRED1-201ENST00000299084 HSPA5P11021 654 aaKnown RBP17.08■□□□□ 0.32
SPRED1-201ENST00000299084 TTC39AQ5SRH9 613 aa17.08■□□□□ 0.32
SPRED1-201ENST00000299084 INCENPQ9NQS7 918 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms