RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 CEP152O94986 1710 aa17.09■□□□□ 0.33
RPUSD4-201ENST00000298317 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
RPUSD4-201ENST00000298317 TTC37Q6PGP7 1564 aa17.09■□□□□ 0.33
RPUSD4-201ENST00000298317 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
RPUSD4-201ENST00000298317 DDIT3P35638 169 aa17.08■□□□□ 0.33
RPUSD4-201ENST00000298317 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
RPUSD4-201ENST00000298317 TPM2P07951 284 aa17.07■□□□□ 0.32
RPUSD4-201ENST00000298317 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
RPUSD4-201ENST00000298317 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
RPUSD4-201ENST00000298317 SHROOM2Q13796 1616 aa17.06■□□□□ 0.32
RPUSD4-201ENST00000298317 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
RPUSD4-201ENST00000298317 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
RPUSD4-201ENST00000298317 MFAP1P55081 439 aaKnown RBP17.04■□□□□ 0.32
RPUSD4-201ENST00000298317 PDE4CQ08493 712 aa17.04■□□□□ 0.32
RPUSD4-201ENST00000298317 JPH4Q96JJ6 628 aa17.04■□□□□ 0.32
RPUSD4-201ENST00000298317 TRIM44Q96DX7 344 aaPredicted RBP17.04■□□□□ 0.32
RPUSD4-201ENST00000298317 DNAJC5BQ9UF47 199 aa17.04■□□□□ 0.32
RPUSD4-201ENST00000298317 KANK1Q14678 1352 aa17.03■□□□□ 0.32
RPUSD4-201ENST00000298317 GAS2L3Q86XJ1 694 aa17.02■□□□□ 0.32
RPUSD4-201ENST00000298317 KIAA1210Q9ULL0 1709 aa17.02■□□□□ 0.32
RPUSD4-201ENST00000298317 MVPQ14764 893 aaKnown RBP17.02■□□□□ 0.31
RPUSD4-201ENST00000298317 ERVK-7P63135 1459 aa17.01■□□□□ 0.31
RPUSD4-201ENST00000298317 TRPM2O94759 1503 aa17.01■□□□□ 0.31
RPUSD4-201ENST00000298317 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
RPUSD4-201ENST00000298317 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
RPUSD4-201ENST00000298317 SNX21Q969T3 373 aa17.01■□□□□ 0.31
RPUSD4-201ENST00000298317 CARD14Q9BXL6 1004 aa17.01■□□□□ 0.31
RPUSD4-201ENST00000298317 PDCL3Q9H2J4 239 aa17■□□□□ 0.31
RPUSD4-201ENST00000298317 CIZ1Q9ULV3 898 aaPredicted RBP17■□□□□ 0.31
RPUSD4-201ENST00000298317 SMC5Q8IY18 1101 aa17■□□□□ 0.31
RPUSD4-201ENST00000298317 TNPO1Q92973 898 aaKnown RBP17■□□□□ 0.31
RPUSD4-201ENST00000298317 RUNDC1Q96C34 613 aa17■□□□□ 0.31
RPUSD4-201ENST00000298317 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
RPUSD4-201ENST00000298317 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
RPUSD4-201ENST00000298317 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
RPUSD4-201ENST00000298317 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
RPUSD4-201ENST00000298317 SKOR2Q2VWA4 1001 aaPredicted RBP16.98■□□□□ 0.31
RPUSD4-201ENST00000298317 GBP4Q96PP9 640 aa16.98■□□□□ 0.31
RPUSD4-201ENST00000298317 PRDM4Q9UKN5 801 aa16.98■□□□□ 0.31
RPUSD4-201ENST00000298317 PTMSP20962 102 aa16.97■□□□□ 0.31
RPUSD4-201ENST00000298317 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
RPUSD4-201ENST00000298317 RAB3GAP1Q15042 981 aa16.97■□□□□ 0.31
RPUSD4-201ENST00000298317 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
RPUSD4-201ENST00000298317 TCP11L2Q8N4U5 519 aa16.97■□□□□ 0.31
RPUSD4-201ENST00000298317 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
RPUSD4-201ENST00000298317 CALD1Q05682 793 aaKnown RBP16.96■□□□□ 0.31
RPUSD4-201ENST00000298317 PPP1R9BQ96SB3 815 aa16.96■□□□□ 0.31
RPUSD4-201ENST00000298317 CLTCL1P53675 1640 aa16.96■□□□□ 0.31
RPUSD4-201ENST00000298317 CCDC173Q0VFZ6 552 aa16.96■□□□□ 0.3
RPUSD4-201ENST00000298317 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
RPUSD4-201ENST00000298317 ZKSCAN2Q63HK3 967 aa16.95■□□□□ 0.3
RPUSD4-201ENST00000298317 KIAA1211Q6ZU35 1233 aa16.95■□□□□ 0.3
RPUSD4-201ENST00000298317 PTPRTO14522 1441 aa16.94■□□□□ 0.3
RPUSD4-201ENST00000298317 ERCC6Q03468 1493 aa16.94■□□□□ 0.3
RPUSD4-201ENST00000298317 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
RPUSD4-201ENST00000298317 DZIP1LQ8IYY4 767 aaKnown RBP16.94■□□□□ 0.3
RPUSD4-201ENST00000298317 IBTKQ9P2D0 1353 aaPredicted RBP16.93■□□□□ 0.3
RPUSD4-201ENST00000298317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.92■□□□□ 0.3
RPUSD4-201ENST00000298317 ZSCAN30Q86W11 494 aa16.92■□□□□ 0.3
RPUSD4-201ENST00000298317 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
RPUSD4-201ENST00000298317 OFD1O75665 1012 aa16.92■□□□□ 0.3
RPUSD4-201ENST00000298317 TERF1P54274 439 aa16.92■□□□□ 0.3
RPUSD4-201ENST00000298317 MYO3AQ8NEV4 1616 aa16.91■□□□□ 0.3
RPUSD4-201ENST00000298317 NEURL4Q96JN8 1562 aa16.91■□□□□ 0.3
RPUSD4-201ENST00000298317 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
RPUSD4-201ENST00000298317 CT47B1P0C2W7 299 aaPredicted RBP16.9■□□□□ 0.3
RPUSD4-201ENST00000298317 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
RPUSD4-201ENST00000298317 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
RPUSD4-201ENST00000298317 NASPP49321 788 aaPredicted RBP16.9■□□□□ 0.3
RPUSD4-201ENST00000298317 ABCA6Q8N139 1617 aa16.89■□□□□ 0.29
RPUSD4-201ENST00000298317 SBNO2Q9Y2G9 1366 aa16.89■□□□□ 0.29
RPUSD4-201ENST00000298317 DDX19BQ9UMR2 479 aa16.89■□□□□ 0.29
RPUSD4-201ENST00000298317 NSD3Q9BZ95 1437 aa16.88■□□□□ 0.29
RPUSD4-201ENST00000298317 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
RPUSD4-201ENST00000298317 MAP3K4Q9Y6R4 1608 aa16.88■□□□□ 0.29
RPUSD4-201ENST00000298317 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
RPUSD4-201ENST00000298317 CLEC17AQ6ZS10 378 aa16.88■□□□□ 0.29
RPUSD4-201ENST00000298317 KIF2CQ99661 725 aa16.88■□□□□ 0.29
RPUSD4-201ENST00000298317 ARHGAP31Q2M1Z3 1444 aa16.88■□□□□ 0.29
RPUSD4-201ENST00000298317 MYOM2P54296 1465 aa16.88■□□□□ 0.29
RPUSD4-201ENST00000298317 TRIM27P14373 513 aa16.87■□□□□ 0.29
RPUSD4-201ENST00000298317 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
RPUSD4-201ENST00000298317 USP32Q8NFA0 1604 aa16.87■□□□□ 0.29
RPUSD4-201ENST00000298317 PDIA4P13667 645 aaKnown RBP16.87■□□□□ 0.29
RPUSD4-201ENST00000298317 RIPK4P57078 832 aa16.87■□□□□ 0.29
RPUSD4-201ENST00000298317 CFAP74Q9C0B2 1584 aa16.86■□□□□ 0.29
RPUSD4-201ENST00000298317 FBLN2P98095 1184 aa16.86■□□□□ 0.29
RPUSD4-201ENST00000298317 KLHL40Q2TBA0 621 aa16.86■□□□□ 0.29
RPUSD4-201ENST00000298317 NUCB1Q02818 461 aa16.85■□□□□ 0.29
RPUSD4-201ENST00000298317 CD2BP2O95400 341 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-201ENST00000298317 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-201ENST00000298317 HS1BP3Q53T59 392 aa16.84■□□□□ 0.29
RPUSD4-201ENST00000298317 ITPRIPQ8IWB1 547 aa16.84■□□□□ 0.29
RPUSD4-201ENST00000298317 ANP32BQ92688 251 aaKnown RBP16.84■□□□□ 0.29
RPUSD4-201ENST00000298317 SMC4Q9NTJ3 1288 aa16.84■□□□□ 0.29
RPUSD4-201ENST00000298317 TET3O43151 1660 aa16.84■□□□□ 0.29
RPUSD4-201ENST00000298317 K7ELQ4 463 aaPredicted RBP16.84■□□□□ 0.29
RPUSD4-201ENST00000298317 CFAP70Q5T0N1 1121 aa16.84■□□□□ 0.29
RPUSD4-201ENST00000298317 DEPDC5O75140 1603 aa16.83■□□□□ 0.29
RPUSD4-201ENST00000298317 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms