RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 WRNQ14191 1432 aaPredicted RBP eCLIP11.78□□□□□ -0.52
PRKAA1-201ENST00000296800 GPR37O15354 613 aa11.78□□□□□ -0.52
PRKAA1-201ENST00000296800 PUS10Q3MIT2 529 aaKnown RBP11.78□□□□□ -0.52
PRKAA1-201ENST00000296800 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
PRKAA1-201ENST00000296800 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
PRKAA1-201ENST00000296800 TRIM26Q12899 539 aaPredicted RBP11.76□□□□□ -0.53
PRKAA1-201ENST00000296800 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
PRKAA1-201ENST00000296800 SPSB2Q99619 263 aa11.75□□□□□ -0.53
PRKAA1-201ENST00000296800 NCAPD3P42695 1498 aa11.75□□□□□ -0.53
PRKAA1-201ENST00000296800 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
PRKAA1-201ENST00000296800 KIF21BO75037 1637 aa11.74□□□□□ -0.53
PRKAA1-201ENST00000296800 CRIPAKQ8N1N5 446 aa11.73□□□□□ -0.53
PRKAA1-201ENST00000296800 GMPR2Q9P2T1 348 aaKnown RBP11.73□□□□□ -0.53
PRKAA1-201ENST00000296800 LMOD2Q6P5Q4 547 aa11.72□□□□□ -0.53
PRKAA1-201ENST00000296800 RDH13Q8NBN7 331 aa11.72□□□□□ -0.53
PRKAA1-201ENST00000296800 TOP2BQ02880 1626 aa11.71□□□□□ -0.53
PRKAA1-201ENST00000296800 GOLGA3Q08378 1498 aa11.71□□□□□ -0.53
PRKAA1-201ENST00000296800 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
PRKAA1-201ENST00000296800 TOR4AQ9NXH8 423 aa11.71□□□□□ -0.53
PRKAA1-201ENST00000296800 SOGA1O94964 1423 aa11.7□□□□□ -0.54
PRKAA1-201ENST00000296800 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
PRKAA1-201ENST00000296800 NLRP7Q8WX94 980 aa11.7□□□□□ -0.54
PRKAA1-201ENST00000296800 WFS1O76024 890 aa11.69□□□□□ -0.54
PRKAA1-201ENST00000296800 AVPP01185 164 aa11.69□□□□□ -0.54
PRKAA1-201ENST00000296800 RPIAP49247 311 aa11.69□□□□□ -0.54
PRKAA1-201ENST00000296800 FCF1Q9Y324 198 aaKnown RBP11.69□□□□□ -0.54
PRKAA1-201ENST00000296800 C11orf95C9JLR9 678 aaPredicted RBP11.68□□□□□ -0.54
PRKAA1-201ENST00000296800 AXIN1O15169 862 aa11.68□□□□□ -0.54
PRKAA1-201ENST00000296800 MORN1Q5T089 497 aa11.68□□□□□ -0.54
PRKAA1-201ENST00000296800 PHOX2BQ99453 314 aa11.68□□□□□ -0.54
PRKAA1-201ENST00000296800 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
PRKAA1-201ENST00000296800 FUT2Q10981 343 aa11.67□□□□□ -0.54
PRKAA1-201ENST00000296800 GPIHBP1Q8IV16 184 aa11.67□□□□□ -0.54
PRKAA1-201ENST00000296800 CYP4X1Q8N118 509 aa11.67□□□□□ -0.54
PRKAA1-201ENST00000296800 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
PRKAA1-201ENST00000296800 CEP164Q9UPV0 1460 aa11.67□□□□□ -0.54
PRKAA1-201ENST00000296800 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
PRKAA1-201ENST00000296800 TNIKQ9UKE5 1360 aa11.67□□□□□ -0.54
PRKAA1-201ENST00000296800 ATP6V1AP38606 617 aa11.66□□□□□ -0.54
PRKAA1-201ENST00000296800 GCGRP47871 477 aa11.66□□□□□ -0.54
PRKAA1-201ENST00000296800 SULF1Q8IWU6 871 aa11.66□□□□□ -0.54
PRKAA1-201ENST00000296800 CD2BP2O95400 341 aaKnown RBP11.65□□□□□ -0.54
PRKAA1-201ENST00000296800 NFX1Q12986 1120 aaKnown RBP11.64□□□□□ -0.55
PRKAA1-201ENST00000296800 THAP11Q96EK4 314 aa11.64□□□□□ -0.55
PRKAA1-201ENST00000296800 CTC1Q2NKJ3 1217 aa11.63□□□□□ -0.55
PRKAA1-201ENST00000296800 SLC27A5Q9Y2P5 690 aa11.63□□□□□ -0.55
PRKAA1-201ENST00000296800 RUSC2Q8N2Y8 1516 aa11.63□□□□□ -0.55
PRKAA1-201ENST00000296800 FAM160A2Q8N612 972 aaPredicted RBP11.62□□□□□ -0.55
PRKAA1-201ENST00000296800 FMNL1O95466 1100 aaPredicted RBP11.61□□□□□ -0.55
PRKAA1-201ENST00000296800 PRDM9Q9NQV7 894 aa11.61□□□□□ -0.55
PRKAA1-201ENST00000296800 CFTRP13569 1480 aa11.6□□□□□ -0.55
PRKAA1-201ENST00000296800 SMCPP49901 116 aaPredicted RBP11.6□□□□□ -0.55
PRKAA1-201ENST00000296800 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
PRKAA1-201ENST00000296800 TTC24A2A3L6 582 aaPredicted RBP11.59□□□□□ -0.55
PRKAA1-201ENST00000296800 BRICD5Q6PL45 260 aa11.58□□□□□ -0.56
PRKAA1-201ENST00000296800 STK17AQ9UEE5 414 aa11.58□□□□□ -0.56
PRKAA1-201ENST00000296800 CUX1P39880 1505 aa11.57□□□□□ -0.56
PRKAA1-201ENST00000296800 ERICH3Q5RHP9 1530 aa11.57□□□□□ -0.56
PRKAA1-201ENST00000296800 WIPF1O43516 503 aa11.57□□□□□ -0.56
PRKAA1-201ENST00000296800 LCE2CQ5TA81 110 aa11.57□□□□□ -0.56
PRKAA1-201ENST00000296800 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
PRKAA1-201ENST00000296800 SNRPBP14678 240 aaKnown RBP11.55□□□□□ -0.56
PRKAA1-201ENST00000296800 MAP2K5Q13163 448 aa11.55□□□□□ -0.56
PRKAA1-201ENST00000296800 INSM1Q01101 510 aaPredicted RBP11.54□□□□□ -0.56
PRKAA1-201ENST00000296800 CD46P15529 392 aa11.53□□□□□ -0.56
PRKAA1-201ENST00000296800 SMPD1P17405 629 aa11.53□□□□□ -0.56
PRKAA1-201ENST00000296800 RNF19BQ6ZMZ0 732 aa11.53□□□□□ -0.56
PRKAA1-201ENST00000296800 ATP13A2Q9NQ11 1180 aa11.53□□□□□ -0.56
PRKAA1-201ENST00000296800 TULP1O00294 542 aaPredicted RBP11.52□□□□□ -0.57
PRKAA1-201ENST00000296800 IRF6O14896 467 aa11.52□□□□□ -0.57
PRKAA1-201ENST00000296800 ZBTB24O43167 697 aaPredicted RBP11.52□□□□□ -0.57
PRKAA1-201ENST00000296800 ZEB1P37275 1124 aaPredicted RBP11.52□□□□□ -0.57
PRKAA1-201ENST00000296800 MSS51Q4VC12 460 aa11.52□□□□□ -0.57
PRKAA1-201ENST00000296800 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
PRKAA1-201ENST00000296800 WNT7AO00755 349 aa11.5□□□□□ -0.57
PRKAA1-201ENST00000296800 SNIP1Q8TAD8 396 aaKnown RBP11.5□□□□□ -0.57
PRKAA1-201ENST00000296800 J3QL48 77 aa11.49□□□□□ -0.57
PRKAA1-201ENST00000296800 Q3C1V9 767 aa11.49□□□□□ -0.57
PRKAA1-201ENST00000296800 RAPGEF2Q9Y4G8 1499 aa11.49□□□□□ -0.57
PRKAA1-201ENST00000296800 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
PRKAA1-201ENST00000296800 MINK1Q8N4C8 1332 aaPredicted RBP11.48□□□□□ -0.57
PRKAA1-201ENST00000296800 CLIP1P30622 1438 aa11.48□□□□□ -0.57
PRKAA1-201ENST00000296800 PRXQ9BXM0 1461 aa11.47□□□□□ -0.57
PRKAA1-201ENST00000296800 KDM4AO75164 1064 aa11.47□□□□□ -0.57
PRKAA1-201ENST00000296800 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
PRKAA1-201ENST00000296800 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
PRKAA1-201ENST00000296800 TRIM32Q13049 653 aa11.47□□□□□ -0.57
PRKAA1-201ENST00000296800 MRGPRX2Q96LB1 330 aa11.47□□□□□ -0.57
PRKAA1-201ENST00000296800 TRIM47Q96LD4 638 aa11.47□□□□□ -0.57
PRKAA1-201ENST00000296800 KIF27Q86VH2 1401 aa11.46□□□□□ -0.57
PRKAA1-201ENST00000296800 VPS8Q8N3P4 1428 aa11.46□□□□□ -0.57
PRKAA1-201ENST00000296800 MMP16P51512 607 aa11.45□□□□□ -0.58
PRKAA1-201ENST00000296800 CADPSQ9ULU8 1353 aa11.44□□□□□ -0.58
PRKAA1-201ENST00000296800 HPS1Q92902 700 aa11.44□□□□□ -0.58
PRKAA1-201ENST00000296800 SENP2Q9HC62 589 aa11.44□□□□□ -0.58
PRKAA1-201ENST00000296800 USP46P62068 366 aa11.43□□□□□ -0.58
PRKAA1-201ENST00000296800 USB1Q9BQ65 265 aaKnown RBP11.43□□□□□ -0.58
PRKAA1-201ENST00000296800 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
PRKAA1-201ENST00000296800 CCDC102AQ96A19 550 aa11.42□□□□□ -0.58
PRKAA1-201ENST00000296800 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 897.3 ms