RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 JPH4Q96JJ6 628 aa13.32□□□□□ -0.28
PBRM1-201ENST00000296302 GCC1Q96CN9 775 aa13.31□□□□□ -0.28
PBRM1-201ENST00000296302 MSH5O43196 834 aa13.31□□□□□ -0.28
PBRM1-201ENST00000296302 PPP2R1AP30153 589 aa13.31□□□□□ -0.28
PBRM1-201ENST00000296302 MCM4P33991 863 aa13.31□□□□□ -0.28
PBRM1-201ENST00000296302 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
PBRM1-201ENST00000296302 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
PBRM1-201ENST00000296302 FKBP5Q13451 457 aaPredicted RBP13.3□□□□□ -0.28
PBRM1-201ENST00000296302 RBM10P98175 930 aaKnown RBP13.3□□□□□ -0.28
PBRM1-201ENST00000296302 TEFQ10587 303 aa13.3□□□□□ -0.28
PBRM1-201ENST00000296302 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
PBRM1-201ENST00000296302 TRIM5Q9C035 493 aa13.3□□□□□ -0.28
PBRM1-201ENST00000296302 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
PBRM1-201ENST00000296302 CCDC47Q96A33 483 aaKnown RBP13.3□□□□□ -0.28
PBRM1-201ENST00000296302 AK7Q96M32 723 aa13.3□□□□□ -0.28
PBRM1-201ENST00000296302 MARCH6O60337 910 aa13.29□□□□□ -0.28
PBRM1-201ENST00000296302 G3BP1Q13283 466 aaKnown RBP eCLIP13.29□□□□□ -0.28
PBRM1-201ENST00000296302 CASKIN1Q8WXD9 1431 aa13.29□□□□□ -0.28
PBRM1-201ENST00000296302 NEK4P51957 841 aa13.28□□□□□ -0.28
PBRM1-201ENST00000296302 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
PBRM1-201ENST00000296302 CCP110O43303 1012 aa13.28□□□□□ -0.28
PBRM1-201ENST00000296302 PDCP20941 246 aa13.28□□□□□ -0.28
PBRM1-201ENST00000296302 PSMA5P28066 241 aa13.28□□□□□ -0.28
PBRM1-201ENST00000296302 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
PBRM1-201ENST00000296302 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
PBRM1-201ENST00000296302 RUFY1Q96T51 708 aa13.28□□□□□ -0.28
PBRM1-201ENST00000296302 EID1Q9Y6B2 187 aa13.28□□□□□ -0.28
PBRM1-201ENST00000296302 C1orf141Q5JVX7 400 aa13.27□□□□□ -0.28
PBRM1-201ENST00000296302 MINK1Q8N4C8 1332 aaPredicted RBP13.27□□□□□ -0.28
PBRM1-201ENST00000296302 NCOA2Q15596 1464 aa13.27□□□□□ -0.28
PBRM1-201ENST00000296302 CT47B1P0C2W7 299 aaPredicted RBP13.27□□□□□ -0.28
PBRM1-201ENST00000296302 CDR1P51861 262 aa13.27□□□□□ -0.28
PBRM1-201ENST00000296302 TRDNQ13061 729 aa13.27□□□□□ -0.28
PBRM1-201ENST00000296302 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.28
PBRM1-201ENST00000296302 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
PBRM1-201ENST00000296302 PCMTD1Q96MG8 357 aaPredicted RBP13.27□□□□□ -0.29
PBRM1-201ENST00000296302 DDX58O95786 925 aaKnown RBP13.27□□□□□ -0.29
PBRM1-201ENST00000296302 SDF4Q9BRK5 362 aa13.27□□□□□ -0.29
PBRM1-201ENST00000296302 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
PBRM1-201ENST00000296302 EIF2S2P20042 333 aaKnown RBP13.26□□□□□ -0.29
PBRM1-201ENST00000296302 OLFM4Q6UX06 510 aa13.26□□□□□ -0.29
PBRM1-201ENST00000296302 CCDC9Q9Y3X0 531 aaKnown RBP13.26□□□□□ -0.29
PBRM1-201ENST00000296302 UQCRHLA0A096LP55 91 aa13.25□□□□□ -0.29
PBRM1-201ENST00000296302 UQCRHP07919 91 aa13.25□□□□□ -0.29
PBRM1-201ENST00000296302 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
PBRM1-201ENST00000296302 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
PBRM1-201ENST00000296302 ZSCAN30Q86W11 494 aa13.25□□□□□ -0.29
PBRM1-201ENST00000296302 BCAR3O75815 825 aa13.25□□□□□ -0.29
PBRM1-201ENST00000296302 GNAI3P08754 354 aa13.24□□□□□ -0.29
PBRM1-201ENST00000296302 MTHFSP49914 203 aa13.24□□□□□ -0.29
PBRM1-201ENST00000296302 PDE4CQ08493 712 aa13.24□□□□□ -0.29
PBRM1-201ENST00000296302 SAFBQ15424 915 aaKnown RBP eCLIP13.24□□□□□ -0.29
PBRM1-201ENST00000296302 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
PBRM1-201ENST00000296302 KINO60870 393 aaKnown RBP13.24□□□□□ -0.29
PBRM1-201ENST00000296302 CCDC192P0DO97 292 aa13.24□□□□□ -0.29
PBRM1-201ENST00000296302 EXOSC9Q06265 439 aaKnown RBP13.24□□□□□ -0.29
PBRM1-201ENST00000296302 FBXW7Q969H0 707 aa13.24□□□□□ -0.29
PBRM1-201ENST00000296302 WDR33Q9C0J8 1336 aaKnown RBP13.23□□□□□ -0.29
PBRM1-201ENST00000296302 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
PBRM1-201ENST00000296302 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
PBRM1-201ENST00000296302 UBTFL1P0CB47 393 aaPredicted RBP13.23□□□□□ -0.29
PBRM1-201ENST00000296302 WDR63Q8IWG1 891 aa13.23□□□□□ -0.29
PBRM1-201ENST00000296302 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
PBRM1-201ENST00000296302 CCDC112Q8NEF3 446 aa13.23□□□□□ -0.29
PBRM1-201ENST00000296302 NUTM2FA1L443 756 aa13.22□□□□□ -0.29
PBRM1-201ENST00000296302 CCDC27Q2M243 656 aa13.22□□□□□ -0.29
PBRM1-201ENST00000296302 CCDC184Q52MB2 194 aa13.22□□□□□ -0.29
PBRM1-201ENST00000296302 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
PBRM1-201ENST00000296302 FIBPO43427 364 aa13.22□□□□□ -0.29
PBRM1-201ENST00000296302 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
PBRM1-201ENST00000296302 NBPF8Q3BBV2 869 aa13.22□□□□□ -0.29
PBRM1-201ENST00000296302 WDR97A6NE52 1622 aa13.21□□□□□ -0.29
PBRM1-201ENST00000296302 NECTIN2Q92692 538 aa13.21□□□□□ -0.3
PBRM1-201ENST00000296302 PTPRGP23470 1445 aa13.21□□□□□ -0.3
PBRM1-201ENST00000296302 APPP05067 770 aa13.21□□□□□ -0.3
PBRM1-201ENST00000296302 AEBP1Q8IUX7 1158 aa13.21□□□□□ -0.3
PBRM1-201ENST00000296302 HMOX1P09601 288 aa13.2□□□□□ -0.3
PBRM1-201ENST00000296302 LEKR1Q6ZMV7 388 aa13.2□□□□□ -0.3
PBRM1-201ENST00000296302 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
PBRM1-201ENST00000296302 PDILTQ8N807 584 aa13.2□□□□□ -0.3
PBRM1-201ENST00000296302 FANCD2Q9BXW9 1451 aa13.2□□□□□ -0.3
PBRM1-201ENST00000296302 HIP1O00291 1037 aa13.2□□□□□ -0.3
PBRM1-201ENST00000296302 RALYLQ86SE5 291 aaKnown RBP13.2□□□□□ -0.3
PBRM1-201ENST00000296302 GGNBP2Q9H3C7 697 aa13.2□□□□□ -0.3
PBRM1-201ENST00000296302 CLASRPQ8N2M8 674 aaKnown RBP13.2□□□□□ -0.3
PBRM1-201ENST00000296302 NOB1Q9ULX3 412 aaKnown RBP13.2□□□□□ -0.3
PBRM1-201ENST00000296302 SMC2O95347 1197 aa13.19□□□□□ -0.3
PBRM1-201ENST00000296302 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
PBRM1-201ENST00000296302 ATF7IPQ6VMQ6 1270 aa13.19□□□□□ -0.3
PBRM1-201ENST00000296302 SPC24Q8NBT2 197 aa13.19□□□□□ -0.3
PBRM1-201ENST00000296302 TMX4Q9H1E5 349 aaPredicted RBP13.19□□□□□ -0.3
PBRM1-201ENST00000296302 H0YHG0 523 aa13.19□□□□□ -0.3
PBRM1-201ENST00000296302 ZNF396Q96N95 335 aaPredicted RBP13.19□□□□□ -0.3
PBRM1-201ENST00000296302 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
PBRM1-201ENST00000296302 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
PBRM1-201ENST00000296302 ERICH2A1L162 156 aa13.18□□□□□ -0.3
PBRM1-201ENST00000296302 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
PBRM1-201ENST00000296302 CHD1LQ86WJ1 897 aa13.18□□□□□ -0.3
PBRM1-201ENST00000296302 PDCL2Q8N4E4 241 aa13.18□□□□□ -0.3
PBRM1-201ENST00000296302 FOSBP53539 338 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms