RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ADGRB2O60241 1585 aa12.42□□□□□ -0.42
PDPN-201ENST00000294489 METP08581 1390 aa12.42□□□□□ -0.42
PDPN-201ENST00000294489 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
PDPN-201ENST00000294489 EVC2Q86UK5 1308 aa12.42□□□□□ -0.42
PDPN-201ENST00000294489 SETD1BQ9UPS6 1966 aaKnown RBP12.41□□□□□ -0.42
PDPN-201ENST00000294489 INSRP06213 1382 aa12.41□□□□□ -0.42
PDPN-201ENST00000294489 TMC1Q8TDI8 760 aa12.4□□□□□ -0.42
PDPN-201ENST00000294489 XRN1Q8IZH2 1706 aaKnown RBP12.39□□□□□ -0.43
PDPN-201ENST00000294489 ANKRD26Q9UPS8 1709 aa12.39□□□□□ -0.43
PDPN-201ENST00000294489 LTKP29376 864 aa12.39□□□□□ -0.43
PDPN-201ENST00000294489 SUPT16HQ9Y5B9 1047 aaKnown RBP12.39□□□□□ -0.43
PDPN-201ENST00000294489 CARD14Q9BXL6 1004 aa12.39□□□□□ -0.43
PDPN-201ENST00000294489 PNISRQ8TF01 805 aaKnown RBP12.38□□□□□ -0.43
PDPN-201ENST00000294489 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
PDPN-201ENST00000294489 NEFLP07196 543 aa12.38□□□□□ -0.43
PDPN-201ENST00000294489 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
PDPN-201ENST00000294489 CD163L1Q9NR16 1453 aa12.38□□□□□ -0.43
PDPN-201ENST00000294489 KNSTRNQ9Y448 316 aa12.37□□□□□ -0.43
PDPN-201ENST00000294489 ANKRD36BQ8N2N9 1353 aa12.37□□□□□ -0.43
PDPN-201ENST00000294489 THEMISQ8N1K5 641 aaPredicted RBP12.37□□□□□ -0.43
PDPN-201ENST00000294489 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.37□□□□□ -0.43
PDPN-201ENST00000294489 ATAD2Q6PL18 1390 aa12.37□□□□□ -0.43
PDPN-201ENST00000294489 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
PDPN-201ENST00000294489 STK26Q9P289 416 aa12.36□□□□□ -0.43
PDPN-201ENST00000294489 TOPAZ1Q8N9V7 1692 aa12.36□□□□□ -0.43
PDPN-201ENST00000294489 PLEKHH1Q9ULM0 1364 aa12.36□□□□□ -0.43
PDPN-201ENST00000294489 PTPRUQ92729 1446 aa12.36□□□□□ -0.43
PDPN-201ENST00000294489 PTCH1Q13635 1447 aa12.35□□□□□ -0.43
PDPN-201ENST00000294489 TXNDC2Q86VQ3 553 aa12.35□□□□□ -0.43
PDPN-201ENST00000294489 TBX22Q9Y458 520 aa12.35□□□□□ -0.43
PDPN-201ENST00000294489 AKAP12Q02952 1782 aa12.34□□□□□ -0.43
PDPN-201ENST00000294489 CHD2O14647 1828 aaKnown RBP12.34□□□□□ -0.43
PDPN-201ENST00000294489 KIF20BQ96Q89 1820 aa12.34□□□□□ -0.43
PDPN-201ENST00000294489 EID1Q9Y6B2 187 aa12.34□□□□□ -0.43
PDPN-201ENST00000294489 ATP7BP35670 1465 aa12.34□□□□□ -0.43
PDPN-201ENST00000294489 NSD3Q9BZ95 1437 aa12.34□□□□□ -0.43
PDPN-201ENST00000294489 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
PDPN-201ENST00000294489 SLC12A5Q9H2X9 1139 aa12.33□□□□□ -0.44
PDPN-201ENST00000294489 NSD2O96028 1365 aa12.33□□□□□ -0.44
PDPN-201ENST00000294489 MON2Q7Z3U7 1717 aa12.33□□□□□ -0.44
PDPN-201ENST00000294489 POGKQ9P215 609 aa12.33□□□□□ -0.44
PDPN-201ENST00000294489 PIK3R4Q99570 1358 aa12.33□□□□□ -0.44
PDPN-201ENST00000294489 ROBO2Q9HCK4 1378 aa12.33□□□□□ -0.44
PDPN-201ENST00000294489 FKBP8Q14318 412 aa12.33□□□□□ -0.44
PDPN-201ENST00000294489 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
PDPN-201ENST00000294489 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
PDPN-201ENST00000294489 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
PDPN-201ENST00000294489 MINK1Q8N4C8 1332 aaPredicted RBP12.31□□□□□ -0.44
PDPN-201ENST00000294489 CDC42BPGQ6DT37 1551 aa12.31□□□□□ -0.44
PDPN-201ENST00000294489 WAPLQ7Z5K2 1190 aa12.31□□□□□ -0.44
PDPN-201ENST00000294489 CDK19Q9BWU1 502 aa12.31□□□□□ -0.44
PDPN-201ENST00000294489 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
PDPN-201ENST00000294489 ITSN1Q15811 1721 aa12.3□□□□□ -0.44
PDPN-201ENST00000294489 SHPRHQ149N8 1683 aa12.3□□□□□ -0.44
PDPN-201ENST00000294489 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
PDPN-201ENST00000294489 SAFB2Q14151 953 aaKnown RBP eCLIP12.29□□□□□ -0.44
PDPN-201ENST00000294489 NRKQ7Z2Y5 1582 aa12.29□□□□□ -0.44
PDPN-201ENST00000294489 WASLO00401 505 aaPredicted RBP12.28□□□□□ -0.44
PDPN-201ENST00000294489 SENP3Q9H4L4 574 aaPredicted RBP12.28□□□□□ -0.44
PDPN-201ENST00000294489 SRPK2P78362 688 aaKnown RBP12.28□□□□□ -0.44
PDPN-201ENST00000294489 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
PDPN-201ENST00000294489 NWD1Q149M9 1564 aa12.27□□□□□ -0.45
PDPN-201ENST00000294489 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
PDPN-201ENST00000294489 FMN2Q9NZ56 1722 aa12.26□□□□□ -0.45
PDPN-201ENST00000294489 TERF2IPQ9NYB0 399 aa12.26□□□□□ -0.45
PDPN-201ENST00000294489 ANKLE2Q86XL3 938 aa12.24□□□□□ -0.45
PDPN-201ENST00000294489 SLC26A8Q96RN1 970 aa12.24□□□□□ -0.45
PDPN-201ENST00000294489 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
PDPN-201ENST00000294489 NALCNQ8IZF0 1738 aa12.24□□□□□ -0.45
PDPN-201ENST00000294489 AMOTL2Q9Y2J4 779 aa12.24□□□□□ -0.45
PDPN-201ENST00000294489 BCANQ96GW7 911 aa12.24□□□□□ -0.45
PDPN-201ENST00000294489 EDC4Q6P2E9 1401 aaKnown RBP12.23□□□□□ -0.45
PDPN-201ENST00000294489 CABP1Q9NZU7 370 aa12.23□□□□□ -0.45
PDPN-201ENST00000294489 NPHP4O75161 1426 aaPredicted RBP12.23□□□□□ -0.45
PDPN-201ENST00000294489 RGPD8O14715 1765 aaPredicted RBP12.22□□□□□ -0.45
PDPN-201ENST00000294489 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
PDPN-201ENST00000294489 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
PDPN-201ENST00000294489 PRR36Q9H6K5 1346 aa12.22□□□□□ -0.45
PDPN-201ENST00000294489 HDGFL2Q7Z4V5 671 aaPredicted RBP12.22□□□□□ -0.45
PDPN-201ENST00000294489 NUDT16Q96DE0 195 aaKnown RBP12.22□□□□□ -0.45
PDPN-201ENST00000294489 NUDCQ9Y266 331 aa12.22□□□□□ -0.45
PDPN-201ENST00000294489 USP54Q70EL1 1684 aa12.21□□□□□ -0.45
PDPN-201ENST00000294489 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.45
PDPN-201ENST00000294489 ANKARQ7Z5J8 1434 aa12.21□□□□□ -0.46
PDPN-201ENST00000294489 MORC1Q86VD1 984 aa12.21□□□□□ -0.46
PDPN-201ENST00000294489 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.46
PDPN-201ENST00000294489 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.46
PDPN-201ENST00000294489 FYB1O15117 783 aa12.2□□□□□ -0.46
PDPN-201ENST00000294489 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
PDPN-201ENST00000294489 PLEKHG3A1L390 1219 aa12.2□□□□□ -0.46
PDPN-201ENST00000294489 ERICH6BQ5W0A0 696 aa12.2□□□□□ -0.46
PDPN-201ENST00000294489 SSH2Q76I76 1423 aa12.19□□□□□ -0.46
PDPN-201ENST00000294489 WDR43Q15061 677 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDPN-201ENST00000294489 ADAMTS8Q9UP79 889 aa12.18□□□□□ -0.46
PDPN-201ENST00000294489 MAP2P11137 1827 aaKnown RBP12.17□□□□□ -0.46
PDPN-201ENST00000294489 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
PDPN-201ENST00000294489 SENP3-EIF4A1A0A087X0R7 540 aa12.17□□□□□ -0.46
PDPN-201ENST00000294489 KCNA6P17658 529 aa12.17□□□□□ -0.46
PDPN-201ENST00000294489 PDE3BQ13370 1112 aa12.17□□□□□ -0.46
PDPN-201ENST00000294489 ZNF692Q9BU19 519 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms