RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 EZRP15311 586 aaKnown RBP14.97□□□□□ -0.01
SLX4-201ENST00000294008 XBP1P17861 261 aa14.97□□□□□ -0.01
SLX4-201ENST00000294008 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
SLX4-201ENST00000294008 DDX58O95786 925 aaKnown RBP14.96□□□□□ -0.01
SLX4-201ENST00000294008 NF2P35240 595 aa14.96□□□□□ -0.01
SLX4-201ENST00000294008 STRN4Q9NRL3 753 aa14.96□□□□□ -0.01
SLX4-201ENST00000294008 WASHC2AQ641Q2 1341 aa14.96□□□□□ -0.02
SLX4-201ENST00000294008 ATF3P18847 181 aa14.95□□□□□ -0.02
SLX4-201ENST00000294008 PKD2Q13563 968 aa14.95□□□□□ -0.02
SLX4-201ENST00000294008 CCDC181Q5TID7 509 aa14.95□□□□□ -0.02
SLX4-201ENST00000294008 CCDC73Q6ZRK6 1079 aa14.95□□□□□ -0.02
SLX4-201ENST00000294008 DDX11L8A8MPP1 907 aa14.94□□□□□ -0.02
SLX4-201ENST00000294008 RNF20Q5VTR2 975 aa14.94□□□□□ -0.02
SLX4-201ENST00000294008 GBP2P32456 591 aaPredicted RBP14.94□□□□□ -0.02
SLX4-201ENST00000294008 FMNL2Q96PY5 1086 aa14.94□□□□□ -0.02
SLX4-201ENST00000294008 DRC1Q96MC2 740 aa14.94□□□□□ -0.02
SLX4-201ENST00000294008 DNAJC2Q99543 621 aaKnown RBP14.94□□□□□ -0.02
SLX4-201ENST00000294008 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
SLX4-201ENST00000294008 ERLIN2O94905 339 aa14.93□□□□□ -0.02
SLX4-201ENST00000294008 CCDC112Q8NEF3 446 aa14.93□□□□□ -0.02
SLX4-201ENST00000294008 ARGLU1Q9NWB6 273 aaPredicted RBP14.93□□□□□ -0.02
SLX4-201ENST00000294008 SMC3Q9UQE7 1217 aa14.93□□□□□ -0.02
SLX4-201ENST00000294008 NLRP2Q9NX02 1062 aa14.93□□□□□ -0.02
SLX4-201ENST00000294008 SMC2O95347 1197 aa14.93□□□□□ -0.02
SLX4-201ENST00000294008 ANAPC15P60006 121 aa14.92□□□□□ -0.02
SLX4-201ENST00000294008 FKBP5Q13451 457 aaPredicted RBP14.92□□□□□ -0.02
SLX4-201ENST00000294008 PIBF1Q8WXW3 757 aa14.92□□□□□ -0.02
SLX4-201ENST00000294008 SSBP05455 408 aaKnown RBP eCLIP14.92□□□□□ -0.02
SLX4-201ENST00000294008 HSPA5P11021 654 aaKnown RBP14.92□□□□□ -0.02
SLX4-201ENST00000294008 DESP17661 470 aa14.92□□□□□ -0.02
SLX4-201ENST00000294008 CT47B1P0C2W7 299 aaPredicted RBP14.91□□□□□ -0.02
SLX4-201ENST00000294008 FAM193AP78312 1265 aa14.91□□□□□ -0.02
SLX4-201ENST00000294008 CHMP5Q9NZZ3 219 aa14.91□□□□□ -0.02
SLX4-201ENST00000294008 CEBPZQ03701 1054 aaKnown RBP14.91□□□□□ -0.02
SLX4-201ENST00000294008 DEF6Q9H4E7 631 aa14.91□□□□□ -0.02
SLX4-201ENST00000294008 ECM2O94769 699 aaPredicted RBP14.9□□□□□ -0.02
SLX4-201ENST00000294008 RAPGEF4Q8WZA2 1011 aa14.9□□□□□ -0.02
SLX4-201ENST00000294008 CGNL1Q0VF96 1302 aa14.9□□□□□ -0.02
SLX4-201ENST00000294008 ZNF76P36508 570 aa14.9□□□□□ -0.02
SLX4-201ENST00000294008 FAM161AQ3B820 660 aa14.9□□□□□ -0.02
SLX4-201ENST00000294008 SLC3A2P08195 630 aaKnown RBP14.89□□□□□ -0.03
SLX4-201ENST00000294008 HOMER2Q9NSB8 354 aa14.89□□□□□ -0.03
SLX4-201ENST00000294008 KIF6Q6ZMV9 814 aa14.89□□□□□ -0.03
SLX4-201ENST00000294008 SDF4Q9BRK5 362 aa14.89□□□□□ -0.03
SLX4-201ENST00000294008 DDX23Q9BUQ8 820 aaKnown RBP14.89□□□□□ -0.03
SLX4-201ENST00000294008 TRIM21P19474 475 aaKnown RBP14.88□□□□□ -0.03
SLX4-201ENST00000294008 RBM19Q9Y4C8 960 aaKnown RBP14.88□□□□□ -0.03
SLX4-201ENST00000294008 EIF3AQ14152 1382 aaKnown RBP14.88□□□□□ -0.03
SLX4-201ENST00000294008 GOLGA6L10A6NI86 522 aa14.88□□□□□ -0.03
SLX4-201ENST00000294008 TXLNAP40222 546 aa14.88□□□□□ -0.03
SLX4-201ENST00000294008 SART3Q15020 963 aaKnown RBP14.88□□□□□ -0.03
SLX4-201ENST00000294008 TAF3Q5VWG9 929 aa14.88□□□□□ -0.03
SLX4-201ENST00000294008 TBC1D2BQ9UPU7 963 aa14.88□□□□□ -0.03
SLX4-201ENST00000294008 MINK1Q8N4C8 1332 aaPredicted RBP14.88□□□□□ -0.03
SLX4-201ENST00000294008 CNNM1Q9NRU3 951 aa14.87□□□□□ -0.03
SLX4-201ENST00000294008 GOLGA6L10A0A0M3HER8 536 aa14.87□□□□□ -0.03
SLX4-201ENST00000294008 USP5P45974 858 aa14.87□□□□□ -0.03
SLX4-201ENST00000294008 LIG1P18858 919 aa14.86□□□□□ -0.03
SLX4-201ENST00000294008 BICDL1Q6ZP65 573 aa14.86□□□□□ -0.03
SLX4-201ENST00000294008 SERPINA10Q9UK55 444 aa14.86□□□□□ -0.03
SLX4-201ENST00000294008 WDHD1O75717 1129 aaPredicted RBP14.86□□□□□ -0.03
SLX4-201ENST00000294008 ZMYND15Q9H091 742 aa14.86□□□□□ -0.03
SLX4-201ENST00000294008 TIMELESSQ9UNS1 1208 aa14.86□□□□□ -0.03
SLX4-201ENST00000294008 SMARCE1Q969G3 411 aa14.86□□□□□ -0.03
SLX4-201ENST00000294008 MRPS9P82933 396 aaKnown RBP14.86□□□□□ -0.03
SLX4-201ENST00000294008 SPINK5Q9NQ38 1064 aaPredicted RBP14.86□□□□□ -0.03
SLX4-201ENST00000294008 CEP63Q96MT8 703 aa14.85□□□□□ -0.03
SLX4-201ENST00000294008 FILIP1LQ4L180 1135 aa14.85□□□□□ -0.03
SLX4-201ENST00000294008 ERC1Q8IUD2 1116 aa14.85□□□□□ -0.03
SLX4-201ENST00000294008 MAP3K9P80192 1104 aa14.85□□□□□ -0.03
SLX4-201ENST00000294008 ERCC4Q92889 916 aaPredicted RBP14.85□□□□□ -0.03
SLX4-201ENST00000294008 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
SLX4-201ENST00000294008 TTC39AQ5SRH9 613 aa14.84□□□□□ -0.03
SLX4-201ENST00000294008 TRMT1LQ7Z2T5 733 aaKnown RBP14.84□□□□□ -0.03
SLX4-201ENST00000294008 IPO9Q96P70 1041 aaKnown RBP14.84□□□□□ -0.03
SLX4-201ENST00000294008 FAM177A1Q8N128 213 aaPredicted RBP14.84□□□□□ -0.03
SLX4-201ENST00000294008 NUP133Q8WUM0 1156 aa14.84□□□□□ -0.03
SLX4-201ENST00000294008 TSPYL4Q9UJ04 414 aa14.84□□□□□ -0.03
SLX4-201ENST00000294008 NAT10Q9H0A0 1025 aaKnown RBP14.83□□□□□ -0.04
SLX4-201ENST00000294008 DYDC1Q8WWB3 177 aa14.83□□□□□ -0.04
SLX4-201ENST00000294008 PABPN1LA6NDY0 278 aaKnown RBP14.82□□□□□ -0.04
SLX4-201ENST00000294008 FSD1Q9BTV5 496 aa14.82□□□□□ -0.04
SLX4-201ENST00000294008 SOGA3Q5TF21 947 aa14.81□□□□□ -0.04
SLX4-201ENST00000294008 VTI1AQ96AJ9 217 aa14.81□□□□□ -0.04
SLX4-201ENST00000294008 CCDC113Q9H0I3 377 aa14.81□□□□□ -0.04
SLX4-201ENST00000294008 ZNHIT6Q9NWK9 470 aaKnown RBP14.81□□□□□ -0.04
SLX4-201ENST00000294008 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
SLX4-201ENST00000294008 REC8O95072 547 aa14.81□□□□□ -0.04
SLX4-201ENST00000294008 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.81□□□□□ -0.04
SLX4-201ENST00000294008 ZNF354CQ86Y25 554 aa14.8□□□□□ -0.04
SLX4-201ENST00000294008 E9PSI1 815 aa14.8□□□□□ -0.04
SLX4-201ENST00000294008 CRBNQ96SW2 442 aa14.8□□□□□ -0.04
SLX4-201ENST00000294008 STAMBPO95630 424 aa14.8□□□□□ -0.04
SLX4-201ENST00000294008 SMC1AQ14683 1233 aaKnown RBP14.8□□□□□ -0.04
SLX4-201ENST00000294008 DDX54Q8TDD1 881 aaKnown RBP14.8□□□□□ -0.04
SLX4-201ENST00000294008 GOLGA6L7A0A1B0GV03 622 aa14.79□□□□□ -0.04
SLX4-201ENST00000294008 ERC2O15083 957 aa14.79□□□□□ -0.04
SLX4-201ENST00000294008 CWC15Q9P013 229 aaKnown RBP14.79□□□□□ -0.04
SLX4-201ENST00000294008 LRRFIP2Q9Y608 721 aaKnown RBP14.79□□□□□ -0.04
SLX4-201ENST00000294008 HMOX1P09601 288 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms