RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 MTHFSP49914 203 aa23.68■■□□□ 1.38
LSM11-201ENST00000286307 TPM4P67936 248 aa23.67■■□□□ 1.38
LSM11-201ENST00000286307 GBP4Q96PP9 640 aa23.67■■□□□ 1.38
LSM11-201ENST00000286307 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
LSM11-201ENST00000286307 CCAR1Q8IX12 1150 aaKnown RBP23.66■■□□□ 1.38
LSM11-201ENST00000286307 MTMR7Q9Y216 660 aa23.66■■□□□ 1.38
LSM11-201ENST00000286307 NFXL1Q6ZNB6 911 aa23.65■■□□□ 1.38
LSM11-201ENST00000286307 ZNF692Q9BU19 519 aaPredicted RBP23.65■■□□□ 1.38
LSM11-201ENST00000286307 TRDNQ13061 729 aa23.65■■□□□ 1.38
LSM11-201ENST00000286307 ST18O60284 1047 aa23.65■■□□□ 1.38
LSM11-201ENST00000286307 NGLY1Q96IV0 654 aa23.64■■□□□ 1.37
LSM11-201ENST00000286307 ERICH2A1L162 156 aa23.64■■□□□ 1.37
LSM11-201ENST00000286307 WASHC4Q2M389 1173 aa23.64■■□□□ 1.37
LSM11-201ENST00000286307 RUFY2Q8WXA3 655 aa23.64■■□□□ 1.37
LSM11-201ENST00000286307 WWC1Q8IX03 1113 aa23.63■■□□□ 1.37
LSM11-201ENST00000286307 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
LSM11-201ENST00000286307 CNKSR2Q8WXI2 1034 aa23.63■■□□□ 1.37
LSM11-201ENST00000286307 PRKRIP1Q9H875 184 aaPredicted RBP23.63■■□□□ 1.37
LSM11-201ENST00000286307 IKQ13123 557 aaPredicted RBP23.62■■□□□ 1.37
LSM11-201ENST00000286307 ROCK1Q13464 1354 aa23.62■■□□□ 1.37
LSM11-201ENST00000286307 EHBP1L1Q8N3D4 1523 aa23.62■■□□□ 1.37
LSM11-201ENST00000286307 ZNF530Q6P9A1 599 aaPredicted RBP23.62■■□□□ 1.37
LSM11-201ENST00000286307 BICDL1Q6ZP65 573 aa23.62■■□□□ 1.37
LSM11-201ENST00000286307 PES1O00541 588 aaKnown RBP23.62■■□□□ 1.37
LSM11-201ENST00000286307 MCTP1Q6DN14 999 aa23.61■■□□□ 1.37
LSM11-201ENST00000286307 EFCAB5A4FU69 1503 aa23.61■■□□□ 1.37
LSM11-201ENST00000286307 SLC4A3P48751 1232 aa23.61■■□□□ 1.37
LSM11-201ENST00000286307 ANO2Q9NQ90 1003 aa23.61■■□□□ 1.37
LSM11-201ENST00000286307 UBTFL1P0CB47 393 aaPredicted RBP23.6■■□□□ 1.37
LSM11-201ENST00000286307 TRIM29Q14134 588 aa23.6■■□□□ 1.37
LSM11-201ENST00000286307 PRKAR2BP31323 418 aa23.6■■□□□ 1.37
LSM11-201ENST00000286307 SULT6B1Q6IMI4 303 aa23.6■■□□□ 1.37
LSM11-201ENST00000286307 KIAA0586Q9BVV6 1533 aa23.59■■□□□ 1.37
LSM11-201ENST00000286307 CSPP1Q1MSJ5 1256 aa23.59■■□□□ 1.37
LSM11-201ENST00000286307 CPLX2Q6PUV4 134 aaKnown RBP23.59■■□□□ 1.37
LSM11-201ENST00000286307 SLC12A5Q9H2X9 1139 aa23.59■■□□□ 1.37
LSM11-201ENST00000286307 NBPF1Q3BBV0 1214 aa23.59■■□□□ 1.37
LSM11-201ENST00000286307 CCDC30Q5VVM6 783 aa23.59■■□□□ 1.37
LSM11-201ENST00000286307 DZIP1LQ8IYY4 767 aaKnown RBP23.59■■□□□ 1.37
LSM11-201ENST00000286307 DDX19BQ9UMR2 479 aa23.59■■□□□ 1.37
LSM11-201ENST00000286307 NOC3LQ8WTT2 800 aaKnown RBP23.59■■□□□ 1.37
LSM11-201ENST00000286307 CNNM1Q9NRU3 951 aa23.59■■□□□ 1.37
LSM11-201ENST00000286307 CCDC43Q96MW1 224 aaKnown RBP23.58■■□□□ 1.37
LSM11-201ENST00000286307 TOP2BQ02880 1626 aa23.58■■□□□ 1.37
LSM11-201ENST00000286307 ARHGEF11O15085 1522 aa23.58■■□□□ 1.37
LSM11-201ENST00000286307 CDK13Q14004 1512 aaKnown RBP23.58■■□□□ 1.37
LSM11-201ENST00000286307 GZF1Q9H116 711 aaPredicted RBP23.58■■□□□ 1.37
LSM11-201ENST00000286307 MYL6BP14649 208 aa23.58■■□□□ 1.37
LSM11-201ENST00000286307 KRI1Q8N9T8 703 aaKnown RBP23.57■■□□□ 1.36
LSM11-201ENST00000286307 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
LSM11-201ENST00000286307 SYAP1Q96A49 352 aaPredicted RBP23.56■■□□□ 1.36
LSM11-201ENST00000286307 TPD52L1Q16890 204 aaPredicted RBP23.56■■□□□ 1.36
LSM11-201ENST00000286307 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
LSM11-201ENST00000286307 CPLX1O14810 134 aa23.56■■□□□ 1.36
LSM11-201ENST00000286307 RBM5P52756 815 aaKnown RBP eCLIP23.56■■□□□ 1.36
LSM11-201ENST00000286307 EPRSP07814 1512 aaKnown RBP23.56■■□□□ 1.36
LSM11-201ENST00000286307 RRS1Q15050 365 aaKnown RBP23.55■■□□□ 1.36
LSM11-201ENST00000286307 ADGRL1O94910 1474 aa23.55■■□□□ 1.36
LSM11-201ENST00000286307 HSP90AB4PQ58FF6 505 aa23.55■■□□□ 1.36
LSM11-201ENST00000286307 CRBNQ96SW2 442 aa23.55■■□□□ 1.36
LSM11-201ENST00000286307 IQGAP2Q13576 1575 aa23.55■■□□□ 1.36
LSM11-201ENST00000286307 FOXD4L6Q3SYB3 417 aaPredicted RBP23.54■■□□□ 1.36
LSM11-201ENST00000286307 FOXD4L3Q6VB84 417 aaPredicted RBP23.54■■□□□ 1.36
LSM11-201ENST00000286307 ZKSCAN1P17029 563 aaPredicted RBP23.54■■□□□ 1.36
LSM11-201ENST00000286307 CEP89Q96ST8 783 aa23.54■■□□□ 1.36
LSM11-201ENST00000286307 ARAP1Q96P48 1450 aa23.53■■□□□ 1.36
LSM11-201ENST00000286307 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
LSM11-201ENST00000286307 FBXO31Q5XUX0 539 aaPredicted RBP23.53■■□□□ 1.36
LSM11-201ENST00000286307 CHMP4CQ96CF2 233 aa23.53■■□□□ 1.36
LSM11-201ENST00000286307 KIF7Q2M1P5 1343 aa23.52■■□□□ 1.36
LSM11-201ENST00000286307 UBAP1LF5GYI3 381 aa23.51■■□□□ 1.35
LSM11-201ENST00000286307 HFM1A2PYH4 1435 aa23.51■■□□□ 1.35
LSM11-201ENST00000286307 NUDT16Q96DE0 195 aaKnown RBP23.51■■□□□ 1.35
LSM11-201ENST00000286307 ERC2O15083 957 aa23.51■■□□□ 1.35
LSM11-201ENST00000286307 GLIPR1L2Q4G1C9 344 aa23.51■■□□□ 1.35
LSM11-201ENST00000286307 RPGRIP1LQ68CZ1 1315 aa23.5■■□□□ 1.35
LSM11-201ENST00000286307 TBC1D2BQ9UPU7 963 aa23.5■■□□□ 1.35
LSM11-201ENST00000286307 PTMSP20962 102 aa23.49■■□□□ 1.35
LSM11-201ENST00000286307 MSNP26038 577 aaKnown RBP23.49■■□□□ 1.35
LSM11-201ENST00000286307 DNAJC2Q99543 621 aaKnown RBP23.49■■□□□ 1.35
LSM11-201ENST00000286307 FOSBP53539 338 aa23.48■■□□□ 1.35
LSM11-201ENST00000286307 PLB1Q6P1J6 1458 aa23.48■■□□□ 1.35
LSM11-201ENST00000286307 FOXO3O43524 673 aa23.48■■□□□ 1.35
LSM11-201ENST00000286307 CNTLNQ9NXG0 1405 aa23.48■■□□□ 1.35
LSM11-201ENST00000286307 AMOTL2Q9Y2J4 779 aa23.48■■□□□ 1.35
LSM11-201ENST00000286307 GRIN2AQ12879 1464 aa23.48■■□□□ 1.35
LSM11-201ENST00000286307 MAGI1Q96QZ7 1491 aaPredicted RBP23.48■■□□□ 1.35
LSM11-201ENST00000286307 RNF20Q5VTR2 975 aa23.47■■□□□ 1.35
LSM11-201ENST00000286307 NAP1L5Q96NT1 182 aaPredicted RBP23.47■■□□□ 1.35
LSM11-201ENST00000286307 AKNAQ7Z591 1439 aa23.47■■□□□ 1.35
LSM11-201ENST00000286307 SUPT6HQ7KZ85 1726 aaKnown RBP23.47■■□□□ 1.35
LSM11-201ENST00000286307 ATP2B2Q01814 1243 aa23.47■■□□□ 1.35
LSM11-201ENST00000286307 HDGFL1Q5TGJ6 251 aa23.47■■□□□ 1.35
LSM11-201ENST00000286307 KDM4AO75164 1064 aa23.46■■□□□ 1.35
LSM11-201ENST00000286307 RALYLQ86SE5 291 aaKnown RBP23.46■■□□□ 1.35
LSM11-201ENST00000286307 GNL3LQ9NVN8 582 aaKnown RBP23.46■■□□□ 1.35
LSM11-201ENST00000286307 BTBD11A6QL63 1104 aa23.46■■□□□ 1.35
LSM11-201ENST00000286307 TTC39AQ5SRH9 613 aa23.45■■□□□ 1.35
LSM11-201ENST00000286307 RRP1P56182 461 aaKnown RBP23.45■■□□□ 1.34
LSM11-201ENST00000286307 KCNH5Q8NCM2 988 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms