RNA–Protein interactions for RNA: ENST00000283882.3

CFDP1-201, Transcript of craniofacial development protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFDP1, Length 1,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-201ENST00000283882 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
CFDP1-201ENST00000283882 PTCH1Q13635 1447 aa17.34■□□□□ 0.37
CFDP1-201ENST00000283882 PUS7Q96PZ0 661 aaKnown RBP17.34■□□□□ 0.37
CFDP1-201ENST00000283882 XRN1Q8IZH2 1706 aaKnown RBP17.33■□□□□ 0.37
CFDP1-201ENST00000283882 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
CFDP1-201ENST00000283882 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
CFDP1-201ENST00000283882 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
CFDP1-201ENST00000283882 BCANQ96GW7 911 aa17.3■□□□□ 0.36
CFDP1-201ENST00000283882 MYOM1P52179 1685 aa17.29■□□□□ 0.36
CFDP1-201ENST00000283882 ADGRB2O60241 1585 aa17.29■□□□□ 0.36
CFDP1-201ENST00000283882 STK26Q9P289 416 aa17.29■□□□□ 0.36
CFDP1-201ENST00000283882 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
CFDP1-201ENST00000283882 PRAM1Q96QH2 718 aa17.28■□□□□ 0.36
CFDP1-201ENST00000283882 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
CFDP1-201ENST00000283882 EVC2Q86UK5 1308 aa17.27■□□□□ 0.36
CFDP1-201ENST00000283882 POGKQ9P215 609 aa17.27■□□□□ 0.36
CFDP1-201ENST00000283882 NWD1Q149M9 1564 aa17.27■□□□□ 0.35
CFDP1-201ENST00000283882 SLC26A8Q96RN1 970 aa17.26■□□□□ 0.35
CFDP1-201ENST00000283882 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
CFDP1-201ENST00000283882 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
CFDP1-201ENST00000283882 ROBO2Q9HCK4 1378 aa17.25■□□□□ 0.35
CFDP1-201ENST00000283882 ATAD2Q6PL18 1390 aa17.23■□□□□ 0.35
CFDP1-201ENST00000283882 PLEKHH1Q9ULM0 1364 aa17.23■□□□□ 0.35
CFDP1-201ENST00000283882 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
CFDP1-201ENST00000283882 POTEHQ6S545 545 aa17.21■□□□□ 0.35
CFDP1-201ENST00000283882 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
CFDP1-201ENST00000283882 ANP32CO43423 234 aa17.2■□□□□ 0.34
CFDP1-201ENST00000283882 MIER1Q8N108 512 aa17.2■□□□□ 0.34
CFDP1-201ENST00000283882 NCKAP5LQ9HCH0 1330 aa17.2■□□□□ 0.34
CFDP1-201ENST00000283882 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
CFDP1-201ENST00000283882 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.19■□□□□ 0.34
CFDP1-201ENST00000283882 KTN1Q86UP2 1357 aaKnown RBP17.19■□□□□ 0.34
CFDP1-201ENST00000283882 DSG3P32926 999 aa17.19■□□□□ 0.34
CFDP1-201ENST00000283882 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
CFDP1-201ENST00000283882 MINK1Q8N4C8 1332 aaPredicted RBP17.19■□□□□ 0.34
CFDP1-201ENST00000283882 SAFB2Q14151 953 aaKnown RBP eCLIP17.17■□□□□ 0.344e-6■□□□□ 10.6
CFDP1-201ENST00000283882 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
CFDP1-201ENST00000283882 STRCQ7RTU9 1775 aa17.17■□□□□ 0.34
CFDP1-201ENST00000283882 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
CFDP1-201ENST00000283882 CAPN15O75808 1086 aa17.16■□□□□ 0.34
CFDP1-201ENST00000283882 KCNA6P17658 529 aa17.16■□□□□ 0.34
CFDP1-201ENST00000283882 USP32Q8NFA0 1604 aa17.16■□□□□ 0.34
CFDP1-201ENST00000283882 WASLO00401 505 aaPredicted RBP17.15■□□□□ 0.34
CFDP1-201ENST00000283882 PER1O15534 1290 aaPredicted RBP17.15■□□□□ 0.34
CFDP1-201ENST00000283882 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
CFDP1-201ENST00000283882 ATP7BP35670 1465 aa17.14■□□□□ 0.33
CFDP1-201ENST00000283882 CCER2I3L3R5 266 aa17.14■□□□□ 0.33
CFDP1-201ENST00000283882 PANK3Q9H999 370 aa17.14■□□□□ 0.33
CFDP1-201ENST00000283882 ANKRD36BQ8N2N9 1353 aa17.14■□□□□ 0.33
CFDP1-201ENST00000283882 HSPA2P54652 639 aa17.13■□□□□ 0.33
CFDP1-201ENST00000283882 SRPK2P78362 688 aaKnown RBP17.13■□□□□ 0.33
CFDP1-201ENST00000283882 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
CFDP1-201ENST00000283882 PRKRIP1Q9H875 184 aaPredicted RBP17.13■□□□□ 0.33
CFDP1-201ENST00000283882 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
CFDP1-201ENST00000283882 CABP2Q9NPB3 220 aa17.12■□□□□ 0.33
CFDP1-201ENST00000283882 ADGRL3Q9HAR2 1447 aa17.12■□□□□ 0.33
CFDP1-201ENST00000283882 NALCNQ8IZF0 1738 aa17.11■□□□□ 0.33
CFDP1-201ENST00000283882 ANKARQ7Z5J8 1434 aa17.11■□□□□ 0.33
CFDP1-201ENST00000283882 NCOA3Q9Y6Q9 1424 aa17.11■□□□□ 0.33
CFDP1-201ENST00000283882 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
CFDP1-201ENST00000283882 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
CFDP1-201ENST00000283882 FMN2Q9NZ56 1722 aa17.1■□□□□ 0.33
CFDP1-201ENST00000283882 RALBP1Q15311 655 aa17.09■□□□□ 0.33
CFDP1-201ENST00000283882 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
CFDP1-201ENST00000283882 CD163L1Q9NR16 1453 aa17.08■□□□□ 0.32
CFDP1-201ENST00000283882 NSD2O96028 1365 aa17.07■□□□□ 0.32
CFDP1-201ENST00000283882 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
CFDP1-201ENST00000283882 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
CFDP1-201ENST00000283882 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
CFDP1-201ENST00000283882 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
CFDP1-201ENST00000283882 A0A1W2PP64 1363 aa17.06■□□□□ 0.32
CFDP1-201ENST00000283882 TMC1Q8TDI8 760 aa17.06■□□□□ 0.32
CFDP1-201ENST00000283882 CCDC61Q9Y6R9 512 aa17.06■□□□□ 0.32
CFDP1-201ENST00000283882 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
CFDP1-201ENST00000283882 PPIP5K1Q6PFW1 1433 aa17.05■□□□□ 0.32
CFDP1-201ENST00000283882 NUDT16Q96DE0 195 aaKnown RBP17.05■□□□□ 0.32
CFDP1-201ENST00000283882 STRCP1A6NGW2 1772 aa17.05■□□□□ 0.32
CFDP1-201ENST00000283882 DCCP43146 1447 aa17.04■□□□□ 0.32
CFDP1-201ENST00000283882 PRR36Q9H6K5 1346 aa17.04■□□□□ 0.32
CFDP1-201ENST00000283882 AKAP12Q02952 1782 aa17.04■□□□□ 0.32
CFDP1-201ENST00000283882 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
CFDP1-201ENST00000283882 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
CFDP1-201ENST00000283882 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
CFDP1-201ENST00000283882 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.32
CFDP1-201ENST00000283882 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
CFDP1-201ENST00000283882 PLEKHG3A1L390 1219 aa17.01■□□□□ 0.31
CFDP1-201ENST00000283882 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
CFDP1-201ENST00000283882 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
CFDP1-201ENST00000283882 ANKRD26Q9UPS8 1709 aa17■□□□□ 0.31
CFDP1-201ENST00000283882 BRD4O60885 1362 aaPredicted RBP17■□□□□ 0.31
CFDP1-201ENST00000283882 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
CFDP1-201ENST00000283882 PROSER2Q86WR7 435 aaPredicted RBP16.99■□□□□ 0.31
CFDP1-201ENST00000283882 POLR3AO14802 1390 aaPredicted RBP16.99■□□□□ 0.31
CFDP1-201ENST00000283882 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
CFDP1-201ENST00000283882 TMEM94Q12767 1356 aa16.98■□□□□ 0.31
CFDP1-201ENST00000283882 KIF20BQ96Q89 1820 aa16.98■□□□□ 0.31
CFDP1-201ENST00000283882 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
CFDP1-201ENST00000283882 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
CFDP1-201ENST00000283882 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
CFDP1-201ENST00000283882 LRRC7Q96NW7 1537 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms