RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 DIP2AQ14689 1571 aa15.67■□□□□ 0.1
XRCC4-201ENST00000282268 KCNA6P17658 529 aa15.66■□□□□ 0.1
XRCC4-201ENST00000282268 CDK19Q9BWU1 502 aa15.66■□□□□ 0.1
XRCC4-201ENST00000282268 TULP4Q9NRJ4 1543 aa15.66■□□□□ 0.1
XRCC4-201ENST00000282268 LMTK3Q96Q04 1460 aa15.65■□□□□ 0.1
XRCC4-201ENST00000282268 RBM33Q96EV2 1170 aaKnown RBP15.64■□□□□ 0.09
XRCC4-201ENST00000282268 TECPR2O15040 1411 aa15.64■□□□□ 0.09
XRCC4-201ENST00000282268 CPS1P31327 1500 aa15.64■□□□□ 0.09
XRCC4-201ENST00000282268 FAM135BQ49AJ0 1406 aa15.63■□□□□ 0.09
XRCC4-201ENST00000282268 KNDC1Q76NI1 1749 aa15.63■□□□□ 0.09
XRCC4-201ENST00000282268 SIRT1Q96EB6 747 aa15.63■□□□□ 0.09
XRCC4-201ENST00000282268 SLC12A5Q9H2X9 1139 aa15.62■□□□□ 0.09
XRCC4-201ENST00000282268 NUTM2FA1L443 756 aa15.6■□□□□ 0.09
XRCC4-201ENST00000282268 WASLO00401 505 aaPredicted RBP15.6■□□□□ 0.09
XRCC4-201ENST00000282268 PIK3R4Q99570 1358 aa15.6■□□□□ 0.09
XRCC4-201ENST00000282268 CC2D1BQ5T0F9 858 aaKnown RBP15.58■□□□□ 0.08
XRCC4-201ENST00000282268 MYOM1P52179 1685 aa15.58■□□□□ 0.08
XRCC4-201ENST00000282268 XRN1Q8IZH2 1706 aaKnown RBP15.58■□□□□ 0.08
XRCC4-201ENST00000282268 PTCH1Q13635 1447 aa15.58■□□□□ 0.08
XRCC4-201ENST00000282268 KNSTRNQ9Y448 316 aa15.57■□□□□ 0.08
XRCC4-201ENST00000282268 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.57■□□□□ 0.08
XRCC4-201ENST00000282268 C14orf37Q86TY3 774 aa15.57■□□□□ 0.08
XRCC4-201ENST00000282268 PER1O15534 1290 aaPredicted RBP15.56■□□□□ 0.08
XRCC4-201ENST00000282268 PROSER2Q86WR7 435 aaPredicted RBP15.56■□□□□ 0.08
XRCC4-201ENST00000282268 PUS7Q96PZ0 661 aaKnown RBP15.56■□□□□ 0.08
XRCC4-201ENST00000282268 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
XRCC4-201ENST00000282268 CABP1Q9NZU7 370 aa15.56■□□□□ 0.08
XRCC4-201ENST00000282268 ATAD2Q6PL18 1390 aa15.56■□□□□ 0.08
XRCC4-201ENST00000282268 CHD2O14647 1828 aaKnown RBP15.55■□□□□ 0.08
XRCC4-201ENST00000282268 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
XRCC4-201ENST00000282268 CARD14Q9BXL6 1004 aa15.55■□□□□ 0.08
XRCC4-201ENST00000282268 YTHDC1Q96MU7 727 aaKnown RBP15.54■□□□□ 0.08
XRCC4-201ENST00000282268 STRCQ7RTU9 1775 aa15.52■□□□□ 0.08
XRCC4-201ENST00000282268 NSD3Q9BZ95 1437 aa15.52■□□□□ 0.08
XRCC4-201ENST00000282268 KTN1Q86UP2 1357 aaKnown RBP15.52■□□□□ 0.08
XRCC4-201ENST00000282268 PRR36Q9H6K5 1346 aa15.51■□□□□ 0.07
XRCC4-201ENST00000282268 HDGFL2Q7Z4V5 671 aaPredicted RBP15.51■□□□□ 0.07
XRCC4-201ENST00000282268 PPIP5K1Q6PFW1 1433 aa15.51■□□□□ 0.07
XRCC4-201ENST00000282268 TERF2IPQ9NYB0 399 aa15.51■□□□□ 0.07
XRCC4-201ENST00000282268 A0A1W2PP64 1363 aa15.49■□□□□ 0.07
XRCC4-201ENST00000282268 ANKRD36BQ8N2N9 1353 aa15.49■□□□□ 0.07
XRCC4-201ENST00000282268 CCDC61Q9Y6R9 512 aa15.49■□□□□ 0.07
XRCC4-201ENST00000282268 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
XRCC4-201ENST00000282268 CCER2I3L3R5 266 aa15.48■□□□□ 0.07
XRCC4-201ENST00000282268 CCDC184Q52MB2 194 aa15.48■□□□□ 0.07
XRCC4-201ENST00000282268 AMER1Q5JTC6 1135 aaPredicted RBP15.48■□□□□ 0.07
XRCC4-201ENST00000282268 NWD1Q149M9 1564 aa15.48■□□□□ 0.07
XRCC4-201ENST00000282268 NINLQ9Y2I6 1382 aa15.48■□□□□ 0.07
XRCC4-201ENST00000282268 ZNF335Q9H4Z2 1342 aaPredicted RBP15.48■□□□□ 0.07
XRCC4-201ENST00000282268 PMFBP1Q8TBY8 1022 aa15.48■□□□□ 0.07
XRCC4-201ENST00000282268 ATP7BP35670 1465 aa15.47■□□□□ 0.07
XRCC4-201ENST00000282268 RALBP1Q15311 655 aa15.47■□□□□ 0.07
XRCC4-201ENST00000282268 PHF23Q9BUL5 403 aaPredicted RBP15.47■□□□□ 0.07
XRCC4-201ENST00000282268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.46■□□□□ 0.07
XRCC4-201ENST00000282268 MRS2Q9HD23 443 aa15.46■□□□□ 0.07
XRCC4-201ENST00000282268 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.06
XRCC4-201ENST00000282268 TNNT2P45379 298 aaPredicted RBP15.45■□□□□ 0.06
XRCC4-201ENST00000282268 CD163L1Q9NR16 1453 aa15.45■□□□□ 0.06
XRCC4-201ENST00000282268 ADGRL3Q9HAR2 1447 aa15.45■□□□□ 0.06
XRCC4-201ENST00000282268 STRCP1A6NGW2 1772 aa15.45■□□□□ 0.06
XRCC4-201ENST00000282268 TMEM94Q12767 1356 aa15.44■□□□□ 0.06
XRCC4-201ENST00000282268 CGNL1Q0VF96 1302 aa15.44■□□□□ 0.06
XRCC4-201ENST00000282268 MYBBP1AQ9BQG0 1328 aaKnown RBP15.44■□□□□ 0.06
XRCC4-201ENST00000282268 DMRT2Q9Y5R5 561 aa15.44■□□□□ 0.06
XRCC4-201ENST00000282268 PARD3Q8TEW0 1356 aa15.44■□□□□ 0.06
XRCC4-201ENST00000282268 NKTRP30414 1462 aaKnown RBP15.44■□□□□ 0.06
XRCC4-201ENST00000282268 ACEP12821 1306 aa15.43■□□□□ 0.06
XRCC4-201ENST00000282268 MORC1Q86VD1 984 aa15.43■□□□□ 0.06
XRCC4-201ENST00000282268 NGDNQ8NEJ9 315 aaKnown RBP15.43■□□□□ 0.06
XRCC4-201ENST00000282268 GGNBP2Q9H3C7 697 aa15.42■□□□□ 0.06
XRCC4-201ENST00000282268 USP32Q8NFA0 1604 aa15.41■□□□□ 0.06
XRCC4-201ENST00000282268 PLEKHG3A1L390 1219 aa15.41■□□□□ 0.06
XRCC4-201ENST00000282268 ESCO1Q5FWF5 840 aa15.41■□□□□ 0.06
XRCC4-201ENST00000282268 C19orf44Q9H6X5 657 aa15.41■□□□□ 0.06
XRCC4-201ENST00000282268 ATF3P18847 181 aa15.4■□□□□ 0.06
XRCC4-201ENST00000282268 CDC42BPGQ6DT37 1551 aa15.4■□□□□ 0.06
XRCC4-201ENST00000282268 FAM9BQ8IZU0 186 aa15.4■□□□□ 0.06
XRCC4-201ENST00000282268 FMN2Q9NZ56 1722 aa15.4■□□□□ 0.06
XRCC4-201ENST00000282268 CPSF1Q10570 1443 aaKnown RBP15.39■□□□□ 0.05
XRCC4-201ENST00000282268 ANKARQ7Z5J8 1434 aa15.39■□□□□ 0.05
XRCC4-201ENST00000282268 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
XRCC4-201ENST00000282268 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
XRCC4-201ENST00000282268 RGPD8O14715 1765 aaPredicted RBP15.39■□□□□ 0.05
XRCC4-201ENST00000282268 FYB1O15117 783 aa15.38■□□□□ 0.05
XRCC4-201ENST00000282268 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
XRCC4-201ENST00000282268 PHF8Q9UPP1 1060 aa15.38■□□□□ 0.05
XRCC4-201ENST00000282268 TOPAZ1Q8N9V7 1692 aa15.38■□□□□ 0.05
XRCC4-201ENST00000282268 NLRP13Q86W25 1043 aa15.38■□□□□ 0.05
XRCC4-201ENST00000282268 NME9Q86XW9 330 aa15.38■□□□□ 0.05
XRCC4-201ENST00000282268 ZRANB1Q9UGI0 708 aa15.38■□□□□ 0.05
XRCC4-201ENST00000282268 ORAI2Q96SN7 254 aa15.37■□□□□ 0.05
XRCC4-201ENST00000282268 ITSN1Q15811 1721 aa15.37■□□□□ 0.05
XRCC4-201ENST00000282268 EDC4Q6P2E9 1401 aaKnown RBP15.36■□□□□ 0.05
XRCC4-201ENST00000282268 MSH6P52701 1360 aa15.36■□□□□ 0.05
XRCC4-201ENST00000282268 LRRC7Q96NW7 1537 aa15.36■□□□□ 0.05
XRCC4-201ENST00000282268 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
XRCC4-201ENST00000282268 TTC21BQ7Z4L5 1316 aa15.35■□□□□ 0.05
XRCC4-201ENST00000282268 XPCQ01831 940 aaPredicted RBP15.34■□□□□ 0.05
XRCC4-201ENST00000282268 BRD4O60885 1362 aaPredicted RBP15.34■□□□□ 0.05
XRCC4-201ENST00000282268 NSD2O96028 1365 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms