RNA–Protein interactions for RNA: ENST00000278980.10

COMMD7-201, Transcript of COMM domain containing 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COMMD7, Length 1,900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD7-201ENST00000278980 USP32Q8NFA0 1604 aa34.31■■■■□ 3.08
COMMD7-201ENST00000278980 BLMP54132 1417 aaPredicted RBP34.31■■■■□ 3.08
COMMD7-201ENST00000278980 MINK1Q8N4C8 1332 aaPredicted RBP34.3■■■■□ 3.08
COMMD7-201ENST00000278980 ANKRD36BQ8N2N9 1353 aa34.3■■■■□ 3.08
COMMD7-201ENST00000278980 C3P01024 1663 aa34.3■■■■□ 3.08
COMMD7-201ENST00000278980 SRPK2P78362 688 aaKnown RBP34.29■■■■□ 3.08
COMMD7-201ENST00000278980 ATAD2Q6PL18 1390 aa34.28■■■■□ 3.08
COMMD7-201ENST00000278980 ABCC11Q96J66 1382 aa34.28■■■■□ 3.08
COMMD7-201ENST00000278980 CEBPAP49715 358 aaPredicted RBP34.27■■■■□ 3.08
COMMD7-201ENST00000278980 NUDCQ9Y266 331 aa34.24■■■■□ 3.07
COMMD7-201ENST00000278980 CGNL1Q0VF96 1302 aa34.23■■■■□ 3.07
COMMD7-201ENST00000278980 WDR43Q15061 677 aaKnown RBP eCLIP34.22■■■■□ 3.07
COMMD7-201ENST00000278980 DNAJC5Q9H3Z4 198 aa34.22■■■■□ 3.07
COMMD7-201ENST00000278980 SENP3-EIF4A1A0A087X0R7 540 aa34.22■■■■□ 3.07
COMMD7-201ENST00000278980 METP08581 1390 aa34.22■■■■□ 3.07
COMMD7-201ENST00000278980 MORC1Q86VD1 984 aa34.18■■■■□ 3.06
COMMD7-201ENST00000278980 BCANQ96GW7 911 aa34.18■■■■□ 3.06
COMMD7-201ENST00000278980 NSD2O96028 1365 aa34.18■■■■□ 3.06
COMMD7-201ENST00000278980 ADAMTS8Q9UP79 889 aa34.18■■■■□ 3.06
COMMD7-201ENST00000278980 KNDC1Q76NI1 1749 aa34.18■■■■□ 3.06
COMMD7-201ENST00000278980 CDK19Q9BWU1 502 aa34.17■■■■□ 3.06
COMMD7-201ENST00000278980 WAPLQ7Z5K2 1190 aa34.16■■■■□ 3.06
COMMD7-201ENST00000278980 PLEKHG1Q9ULL1 1385 aa34.15■■■■□ 3.06
COMMD7-201ENST00000278980 PLEKHH1Q9ULM0 1364 aa34.15■■■■□ 3.06
COMMD7-201ENST00000278980 A0A1W2PP64 1363 aa34.14■■■■□ 3.06
COMMD7-201ENST00000278980 TECPR2O15040 1411 aa34.14■■■■□ 3.06
COMMD7-201ENST00000278980 PDE3BQ13370 1112 aa34.12■■■■□ 3.05
COMMD7-201ENST00000278980 SIRT1Q96EB6 747 aa34.12■■■■□ 3.05
COMMD7-201ENST00000278980 TERF2IPQ9NYB0 399 aa34.12■■■■□ 3.05
COMMD7-201ENST00000278980 FAM135BQ49AJ0 1406 aa34.12■■■■□ 3.05
COMMD7-201ENST00000278980 PLPPR3Q6T4P5 718 aa34.11■■■■□ 3.05
COMMD7-201ENST00000278980 SLIT1O75093 1534 aa34.11■■■■□ 3.05
COMMD7-201ENST00000278980 CPS1P31327 1500 aa34.11■■■■□ 3.05
COMMD7-201ENST00000278980 ADAMTS13Q76LX8 1427 aa34.11■■■■□ 3.05
COMMD7-201ENST00000278980 EID1Q9Y6B2 187 aa34.1■■■■□ 3.05
COMMD7-201ENST00000278980 POLR3AO14802 1390 aaPredicted RBP34.09■■■■□ 3.05
COMMD7-201ENST00000278980 LTKP29376 864 aa34.09■■■■□ 3.05
COMMD7-201ENST00000278980 TXNDC2Q86VQ3 553 aa34.09■■■■□ 3.05
COMMD7-201ENST00000278980 SALL2Q9Y467 1007 aaPredicted RBP34.08■■■■□ 3.05
COMMD7-201ENST00000278980 ARHGAP23Q9P227 1491 aa34.08■■■■□ 3.05
COMMD7-201ENST00000278980 PELP1Q8IZL8 1130 aaKnown RBP34.07■■■■□ 3.04
COMMD7-201ENST00000278980 CD163L1Q9NR16 1453 aa34.07■■■■□ 3.04
COMMD7-201ENST00000278980 HDGFL2Q7Z4V5 671 aaPredicted RBP34.05■■■■□ 3.04
COMMD7-201ENST00000278980 ERICH6BQ5W0A0 696 aa34.04■■■■□ 3.04
COMMD7-201ENST00000278980 IRX6P78412 446 aaPredicted RBP34.03■■■■□ 3.04
COMMD7-201ENST00000278980 TNNT2P45379 298 aaPredicted RBP34.02■■■■□ 3.04
COMMD7-201ENST00000278980 THEMISQ8N1K5 641 aaPredicted RBP34.02■■■■□ 3.04
COMMD7-201ENST00000278980 WASLO00401 505 aaPredicted RBP34■■■■□ 3.03
COMMD7-201ENST00000278980 CABP1Q9NZU7 370 aa34■■■■□ 3.03
COMMD7-201ENST00000278980 MED14O60244 1454 aa34■■■■□ 3.03
COMMD7-201ENST00000278980 ATP7BP35670 1465 aa33.99■■■■□ 3.03
COMMD7-201ENST00000278980 RIMS1Q86UR5 1692 aaKnown RBP33.98■■■■□ 3.03
COMMD7-201ENST00000278980 RNF123Q5XPI4 1314 aa33.95■■■■□ 3.03
COMMD7-201ENST00000278980 ROBO2Q9HCK4 1378 aa33.95■■■■□ 3.02
COMMD7-201ENST00000278980 ANKRD26Q9UPS8 1709 aa33.94■■■■□ 3.02
COMMD7-201ENST00000278980 CFAP53Q96M91 514 aa33.94■■■■□ 3.02
COMMD7-201ENST00000278980 MTHFSP49914 203 aa33.92■■■■□ 3.02
COMMD7-201ENST00000278980 CEP170BQ9Y4F5 1589 aaPredicted RBP33.92■■■■□ 3.02
COMMD7-201ENST00000278980 SHPRHQ149N8 1683 aa33.92■■■■□ 3.02
COMMD7-201ENST00000278980 DIP2AQ14689 1571 aa33.91■■■■□ 3.02
COMMD7-201ENST00000278980 FYB1O15117 783 aa33.91■■■■□ 3.02
COMMD7-201ENST00000278980 SLC26A8Q96RN1 970 aa33.91■■■■□ 3.02
COMMD7-201ENST00000278980 GGNBP2Q9H3C7 697 aa33.91■■■■□ 3.02
COMMD7-201ENST00000278980 TBX22Q9Y458 520 aa33.9■■■■□ 3.02
COMMD7-201ENST00000278980 PPIP5K1Q6PFW1 1433 aa33.9■■■■□ 3.02
COMMD7-201ENST00000278980 CCDC146Q8IYE0 955 aa33.89■■■■□ 3.02
COMMD7-201ENST00000278980 CDCA7LQ96GN5 454 aa33.89■■■■□ 3.02
COMMD7-201ENST00000278980 ADGRB2O60241 1585 aa33.88■■■■□ 3.01
COMMD7-201ENST00000278980 KIF20BQ96Q89 1820 aa33.88■■■■□ 3.01
COMMD7-201ENST00000278980 PTPRUQ92729 1446 aa33.87■■■■□ 3.01
COMMD7-201ENST00000278980 ADAMTSL3P82987 1691 aa33.87■■■■□ 3.01
COMMD7-201ENST00000278980 NUDT16Q96DE0 195 aaKnown RBP33.87■■■■□ 3.01
COMMD7-201ENST00000278980 CPSF1Q10570 1443 aaKnown RBP33.84■■■■□ 3.01
COMMD7-201ENST00000278980 ZNF521Q96K83 1311 aa33.84■■■■□ 3.01
COMMD7-201ENST00000278980 NGEFQ8N5V2 710 aa33.83■■■■□ 3.01
COMMD7-201ENST00000278980 PPP4R2Q9NY27 417 aa33.83■■■■□ 3.01
COMMD7-201ENST00000278980 RCAN3Q9UKA8 241 aa33.83■■■■□ 3.01
COMMD7-201ENST00000278980 CCDC61Q9Y6R9 512 aa33.83■■■■□ 3.01
COMMD7-201ENST00000278980 CDC42BPGQ6DT37 1551 aa33.82■■■■□ 3
COMMD7-201ENST00000278980 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.81■■■■□ 3
COMMD7-201ENST00000278980 APAF1O14727 1248 aa33.81■■■■□ 3
COMMD7-201ENST00000278980 PTCH1Q13635 1447 aa33.8■■■■□ 3
COMMD7-201ENST00000278980 EDC4Q6P2E9 1401 aaKnown RBP33.8■■■■□ 3
COMMD7-201ENST00000278980 AMOTL2Q9Y2J4 779 aa33.8■■■■□ 3
COMMD7-201ENST00000278980 ZNF142P52746 1687 aaPredicted RBP33.77■■■■□ 3
COMMD7-201ENST00000278980 GOLGA2Q08379 1002 aa33.77■■■■□ 3
COMMD7-201ENST00000278980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.77■■■■□ 3
COMMD7-201ENST00000278980 PRR36Q9H6K5 1346 aa33.75■■■□□ 2.99
COMMD7-201ENST00000278980 RUNDC1Q96C34 613 aa33.74■■■□□ 2.99
COMMD7-201ENST00000278980 MON2Q7Z3U7 1717 aa33.73■■■□□ 2.99
COMMD7-201ENST00000278980 RRP1P56182 461 aaKnown RBP33.73■■■□□ 2.99
COMMD7-201ENST00000278980 ITSN1Q15811 1721 aa33.72■■■□□ 2.99
COMMD7-201ENST00000278980 NCKAP5LQ9HCH0 1330 aa33.72■■■□□ 2.99
COMMD7-201ENST00000278980 AKAP12Q02952 1782 aa33.71■■■□□ 2.99
COMMD7-201ENST00000278980 XRN1Q8IZH2 1706 aaKnown RBP33.71■■■□□ 2.99
COMMD7-201ENST00000278980 PIK3R4Q99570 1358 aa33.71■■■□□ 2.99
COMMD7-201ENST00000278980 COL3A1P02461 1466 aaPredicted RBP33.7■■■□□ 2.99
COMMD7-201ENST00000278980 ZNF692Q9BU19 519 aaPredicted RBP33.7■■■□□ 2.99
COMMD7-201ENST00000278980 TOPAZ1Q8N9V7 1692 aa33.7■■■□□ 2.99
COMMD7-201ENST00000278980 DUSP27Q5VZP5 1158 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms