RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 NSD3Q9BZ95 1437 aa28.7■■■□□ 2.19
GFRA3-201ENST00000274721 METP08581 1390 aa28.7■■■□□ 2.19
GFRA3-201ENST00000274721 ANKRD36BQ8N2N9 1353 aa28.7■■■□□ 2.18
GFRA3-201ENST00000274721 MINK1Q8N4C8 1332 aaPredicted RBP28.69■■■□□ 2.18
GFRA3-201ENST00000274721 USP32Q8NFA0 1604 aa28.67■■■□□ 2.18
GFRA3-201ENST00000274721 ATAD2Q6PL18 1390 aa28.67■■■□□ 2.18
GFRA3-201ENST00000274721 SRPK2P78362 688 aaKnown RBP28.66■■■□□ 2.18
GFRA3-201ENST00000274721 SIRT1Q96EB6 747 aa28.65■■■□□ 2.18
GFRA3-201ENST00000274721 LTKP29376 864 aa28.65■■■□□ 2.18
GFRA3-201ENST00000274721 WAPLQ7Z5K2 1190 aa28.64■■■□□ 2.18
GFRA3-201ENST00000274721 TECPR2O15040 1411 aa28.64■■■□□ 2.18
GFRA3-201ENST00000274721 BLMP54132 1417 aaPredicted RBP28.64■■■□□ 2.18
GFRA3-201ENST00000274721 PLEKHG1Q9ULL1 1385 aa28.63■■■□□ 2.17
GFRA3-201ENST00000274721 ADAMTS13Q76LX8 1427 aa28.63■■■□□ 2.17
GFRA3-201ENST00000274721 PLEKHH1Q9ULM0 1364 aa28.63■■■□□ 2.17
GFRA3-201ENST00000274721 FKBP8Q14318 412 aa28.62■■■□□ 2.17
GFRA3-201ENST00000274721 CDK19Q9BWU1 502 aa28.62■■■□□ 2.17
GFRA3-201ENST00000274721 ARHGAP23Q9P227 1491 aa28.62■■■□□ 2.17
GFRA3-201ENST00000274721 SMG6Q86US8 1419 aaKnown RBP28.62■■■□□ 2.17
GFRA3-201ENST00000274721 SLIT1O75093 1534 aa28.62■■■□□ 2.17
GFRA3-201ENST00000274721 CGNL1Q0VF96 1302 aa28.61■■■□□ 2.17
GFRA3-201ENST00000274721 NEFLP07196 543 aa28.6■■■□□ 2.17
GFRA3-201ENST00000274721 FAM135BQ49AJ0 1406 aa28.6■■■□□ 2.17
GFRA3-201ENST00000274721 KNDC1Q76NI1 1749 aa28.6■■■□□ 2.17
GFRA3-201ENST00000274721 TXNDC2Q86VQ3 553 aa28.59■■■□□ 2.17
GFRA3-201ENST00000274721 ADAMTS8Q9UP79 889 aa28.59■■■□□ 2.17
GFRA3-201ENST00000274721 MED14O60244 1454 aa28.57■■■□□ 2.16
GFRA3-201ENST00000274721 A0A1W2PP64 1363 aa28.57■■■□□ 2.16
GFRA3-201ENST00000274721 NSD2O96028 1365 aa28.57■■■□□ 2.16
GFRA3-201ENST00000274721 CD163L1Q9NR16 1453 aa28.56■■■□□ 2.16
GFRA3-201ENST00000274721 BCANQ96GW7 911 aa28.56■■■□□ 2.16
GFRA3-201ENST00000274721 EID1Q9Y6B2 187 aa28.56■■■□□ 2.16
GFRA3-201ENST00000274721 MORC1Q86VD1 984 aa28.55■■■□□ 2.16
GFRA3-201ENST00000274721 THEMISQ8N1K5 641 aaPredicted RBP28.55■■■□□ 2.16
GFRA3-201ENST00000274721 NUDCQ9Y266 331 aa28.55■■■□□ 2.16
GFRA3-201ENST00000274721 CPS1P31327 1500 aa28.55■■■□□ 2.16
GFRA3-201ENST00000274721 SENP3-EIF4A1A0A087X0R7 540 aa28.54■■■□□ 2.16
GFRA3-201ENST00000274721 TERF2IPQ9NYB0 399 aa28.53■■■□□ 2.16
GFRA3-201ENST00000274721 PLPPR3Q6T4P5 718 aa28.53■■■□□ 2.16
GFRA3-201ENST00000274721 POLR3AO14802 1390 aaPredicted RBP28.53■■■□□ 2.16
GFRA3-201ENST00000274721 WDR43Q15061 677 aaKnown RBP eCLIP28.52■■■□□ 2.16
GFRA3-201ENST00000274721 WASLO00401 505 aaPredicted RBP28.5■■■□□ 2.15
GFRA3-201ENST00000274721 PDE3BQ13370 1112 aa28.49■■■□□ 2.15
GFRA3-201ENST00000274721 CABP1Q9NZU7 370 aa28.49■■■□□ 2.15
GFRA3-201ENST00000274721 RIMS1Q86UR5 1692 aaKnown RBP28.47■■■□□ 2.15
GFRA3-201ENST00000274721 ROBO2Q9HCK4 1378 aa28.47■■■□□ 2.15
GFRA3-201ENST00000274721 TBX22Q9Y458 520 aa28.47■■■□□ 2.15
GFRA3-201ENST00000274721 ADAMTSL3P82987 1691 aa28.46■■■□□ 2.15
GFRA3-201ENST00000274721 HDGFL2Q7Z4V5 671 aaPredicted RBP28.45■■■□□ 2.15
GFRA3-201ENST00000274721 SLC26A8Q96RN1 970 aa28.44■■■□□ 2.14
GFRA3-201ENST00000274721 ATP7BP35670 1465 aa28.44■■■□□ 2.14
GFRA3-201ENST00000274721 CEP170BQ9Y4F5 1589 aaPredicted RBP28.43■■■□□ 2.14
GFRA3-201ENST00000274721 PTPRUQ92729 1446 aa28.43■■■□□ 2.14
GFRA3-201ENST00000274721 FYB1O15117 783 aa28.42■■■□□ 2.14
GFRA3-201ENST00000274721 SALL2Q9Y467 1007 aaPredicted RBP28.42■■■□□ 2.14
GFRA3-201ENST00000274721 TNNT2P45379 298 aaPredicted RBP28.42■■■□□ 2.14
GFRA3-201ENST00000274721 RNF123Q5XPI4 1314 aa28.39■■■□□ 2.14
GFRA3-201ENST00000274721 MTHFSP49914 203 aa28.39■■■□□ 2.14
GFRA3-201ENST00000274721 DIP2AQ14689 1571 aa28.39■■■□□ 2.13
GFRA3-201ENST00000274721 ERICH6BQ5W0A0 696 aa28.38■■■□□ 2.13
GFRA3-201ENST00000274721 CPSF1Q10570 1443 aaKnown RBP28.38■■■□□ 2.13
GFRA3-201ENST00000274721 NUDT16Q96DE0 195 aaKnown RBP28.37■■■□□ 2.13
GFRA3-201ENST00000274721 ADGRB2O60241 1585 aa28.36■■■□□ 2.13
GFRA3-201ENST00000274721 GGNBP2Q9H3C7 697 aa28.36■■■□□ 2.13
GFRA3-201ENST00000274721 CCDC61Q9Y6R9 512 aa28.36■■■□□ 2.13
GFRA3-201ENST00000274721 SETD1BQ9UPS6 1966 aaKnown RBP28.36■■■□□ 2.13
GFRA3-201ENST00000274721 ANKRD26Q9UPS8 1709 aa28.36■■■□□ 2.13
GFRA3-201ENST00000274721 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.36■■■□□ 2.13
GFRA3-201ENST00000274721 PPIP5K1Q6PFW1 1433 aa28.35■■■□□ 2.13
GFRA3-201ENST00000274721 AMOTL2Q9Y2J4 779 aa28.35■■■□□ 2.13
GFRA3-201ENST00000274721 SHPRHQ149N8 1683 aa28.34■■■□□ 2.13
GFRA3-201ENST00000274721 ZNF521Q96K83 1311 aa28.34■■■□□ 2.13
GFRA3-201ENST00000274721 CDCA7LQ96GN5 454 aa28.33■■■□□ 2.13
GFRA3-201ENST00000274721 PTCH1Q13635 1447 aa28.33■■■□□ 2.12
GFRA3-201ENST00000274721 IRX6P78412 446 aaPredicted RBP28.32■■■□□ 2.12
GFRA3-201ENST00000274721 ZNF142P52746 1687 aaPredicted RBP28.32■■■□□ 2.12
GFRA3-201ENST00000274721 CFAP53Q96M91 514 aa28.31■■■□□ 2.12
GFRA3-201ENST00000274721 PRR36Q9H6K5 1346 aa28.31■■■□□ 2.12
GFRA3-201ENST00000274721 CCDC146Q8IYE0 955 aa28.29■■■□□ 2.12
GFRA3-201ENST00000274721 EDC4Q6P2E9 1401 aaKnown RBP28.29■■■□□ 2.12
GFRA3-201ENST00000274721 KIF20BQ96Q89 1820 aa28.28■■■□□ 2.12
GFRA3-201ENST00000274721 CDC42BPGQ6DT37 1551 aa28.28■■■□□ 2.12
GFRA3-201ENST00000274721 NGEFQ8N5V2 710 aa28.28■■■□□ 2.12
GFRA3-201ENST00000274721 PIK3R4Q99570 1358 aa28.28■■■□□ 2.12
GFRA3-201ENST00000274721 NCKAP5LQ9HCH0 1330 aa28.28■■■□□ 2.12
GFRA3-201ENST00000274721 APAF1O14727 1248 aa28.26■■■□□ 2.12
GFRA3-201ENST00000274721 XRN1Q8IZH2 1706 aaKnown RBP28.25■■■□□ 2.11
GFRA3-201ENST00000274721 ANKLE2Q86XL3 938 aa28.25■■■□□ 2.11
GFRA3-201ENST00000274721 ZNF692Q9BU19 519 aaPredicted RBP28.25■■■□□ 2.11
GFRA3-201ENST00000274721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.24■■■□□ 2.11
GFRA3-201ENST00000274721 MON2Q7Z3U7 1717 aa28.23■■■□□ 2.11
GFRA3-201ENST00000274721 AKAP12Q02952 1782 aa28.22■■■□□ 2.11
GFRA3-201ENST00000274721 PLEKHG3A1L390 1219 aa28.21■■■□□ 2.11
GFRA3-201ENST00000274721 RCAN3Q9UKA8 241 aa28.21■■■□□ 2.11
GFRA3-201ENST00000274721 PNPLA6Q8IY17 1366 aa28.21■■■□□ 2.11
GFRA3-201ENST00000274721 COL3A1P02461 1466 aaPredicted RBP28.2■■■□□ 2.11
GFRA3-201ENST00000274721 GOLGA2Q08379 1002 aa28.2■■■□□ 2.11
GFRA3-201ENST00000274721 TOPAZ1Q8N9V7 1692 aa28.2■■■□□ 2.1
GFRA3-201ENST00000274721 RUNDC1Q96C34 613 aa28.19■■■□□ 2.1
GFRA3-201ENST00000274721 KCNA6P17658 529 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms