RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 SLC24A1O60721 1099 aa30.43■■■□□ 2.46
RETREG2-201ENST00000273048 NSD3Q9BZ95 1437 aa30.43■■■□□ 2.46
RETREG2-201ENST00000273048 PMFBP1Q8TBY8 1022 aa30.43■■■□□ 2.46
RETREG2-201ENST00000273048 RUNDC1Q96C34 613 aa30.43■■■□□ 2.46
RETREG2-201ENST00000273048 ADGRL1O94910 1474 aa30.43■■■□□ 2.46
RETREG2-201ENST00000273048 SHPRHQ149N8 1683 aa30.43■■■□□ 2.46
RETREG2-201ENST00000273048 PDZRN3Q9UPQ7 1066 aa30.42■■■□□ 2.46
RETREG2-201ENST00000273048 MYOM2P54296 1465 aa30.41■■■□□ 2.46
RETREG2-201ENST00000273048 SLC12A5Q9H2X9 1139 aa30.4■■■□□ 2.46
RETREG2-201ENST00000273048 ANTXR1Q9H6X2 564 aa30.39■■■□□ 2.46
RETREG2-201ENST00000273048 VWDEQ8N2E2 1590 aa30.38■■■□□ 2.45
RETREG2-201ENST00000273048 TBC1D32Q96NH3 1257 aa30.37■■■□□ 2.45
RETREG2-201ENST00000273048 ASXL2Q76L83 1435 aa30.37■■■□□ 2.45
RETREG2-201ENST00000273048 UPF2Q9HAU5 1272 aaKnown RBP30.36■■■□□ 2.45
RETREG2-201ENST00000273048 TRAK1Q9UPV9 953 aa30.36■■■□□ 2.45
RETREG2-201ENST00000273048 IQSEC2Q5JU85 1478 aa30.36■■■□□ 2.45
RETREG2-201ENST00000273048 PHF23Q9BUL5 403 aaPredicted RBP30.36■■■□□ 2.45
RETREG2-201ENST00000273048 TBC1D2Q9BYX2 928 aa30.35■■■□□ 2.45
RETREG2-201ENST00000273048 MTHFSP49914 203 aa30.33■■■□□ 2.45
RETREG2-201ENST00000273048 WDR63Q8IWG1 891 aa30.33■■■□□ 2.45
RETREG2-201ENST00000273048 FAM43AQ8N2R8 423 aa30.33■■■□□ 2.45
RETREG2-201ENST00000273048 MROH1Q8NDA8 1641 aa30.32■■■□□ 2.44
RETREG2-201ENST00000273048 MROH2AA6NES4 1674 aa30.32■■■□□ 2.44
RETREG2-201ENST00000273048 NEURL4Q96JN8 1562 aa30.32■■■□□ 2.44
RETREG2-201ENST00000273048 KIF1BO60333 1816 aa30.32■■■□□ 2.44
RETREG2-201ENST00000273048 SBNO2Q9Y2G9 1366 aa30.32■■■□□ 2.44
RETREG2-201ENST00000273048 SPRYD3Q8NCJ5 442 aa30.32■■■□□ 2.44
RETREG2-201ENST00000273048 CHGAP10645 457 aaKnown RBP30.31■■■□□ 2.44
RETREG2-201ENST00000273048 MYO3AQ8NEV4 1616 aa30.31■■■□□ 2.44
RETREG2-201ENST00000273048 RWDD1Q9H446 243 aaPredicted RBP30.3■■■□□ 2.44
RETREG2-201ENST00000273048 NOS1P29475 1434 aa30.29■■■□□ 2.44
RETREG2-201ENST00000273048 EIF5BO60841 1220 aaKnown RBP30.29■■■□□ 2.44
RETREG2-201ENST00000273048 AAMPQ13685 434 aa30.29■■■□□ 2.44
RETREG2-201ENST00000273048 IFT172Q9UG01 1749 aa30.29■■■□□ 2.44
RETREG2-201ENST00000273048 NRXN1Q9ULB1 1477 aa30.26■■■□□ 2.43
RETREG2-201ENST00000273048 TMEM132EQ6IEE7 984 aa30.26■■■□□ 2.43
RETREG2-201ENST00000273048 ARXQ96QS3 562 aa30.25■■■□□ 2.43
RETREG2-201ENST00000273048 KIDINS220Q9ULH0 1771 aa30.25■■■□□ 2.43
RETREG2-201ENST00000273048 ZNF518AQ6AHZ1 1483 aa30.25■■■□□ 2.43
RETREG2-201ENST00000273048 MVPQ14764 893 aaKnown RBP30.25■■■□□ 2.43
RETREG2-201ENST00000273048 CCDC27Q2M243 656 aa30.23■■■□□ 2.43
RETREG2-201ENST00000273048 ZMYM3Q14202 1370 aa30.23■■■□□ 2.43
RETREG2-201ENST00000273048 CFAP53Q96M91 514 aa30.22■■■□□ 2.43
RETREG2-201ENST00000273048 MYH16Q9H6N6 1097 aa30.22■■■□□ 2.43
RETREG2-201ENST00000273048 EFCAB6Q5THR3 1501 aa30.21■■■□□ 2.43
RETREG2-201ENST00000273048 U2AF1L5P0DN76 240 aaPredicted RBP30.21■■■□□ 2.43
RETREG2-201ENST00000273048 U2AF1Q01081 240 aaKnown RBP eCLIP30.21■■■□□ 2.436e-6■■■■□ 22.1
RETREG2-201ENST00000273048 FTSJ3Q8IY81 847 aaKnown RBP30.21■■■□□ 2.43
RETREG2-201ENST00000273048 TSR2Q969E8 191 aaKnown RBP30.21■■■□□ 2.43
RETREG2-201ENST00000273048 PPRC1Q5VV67 1664 aaKnown RBP30.2■■■□□ 2.43
RETREG2-201ENST00000273048 ZKSCAN2Q63HK3 967 aa30.2■■■□□ 2.42
RETREG2-201ENST00000273048 QRICH2Q9H0J4 1663 aa30.2■■■□□ 2.42
RETREG2-201ENST00000273048 DZIP1LQ8IYY4 767 aaKnown RBP30.19■■■□□ 2.42
RETREG2-201ENST00000273048 MFAP1P55081 439 aaKnown RBP30.18■■■□□ 2.42
RETREG2-201ENST00000273048 L1TD1Q5T7N2 865 aaKnown RBP30.17■■■□□ 2.42
RETREG2-201ENST00000273048 ZC3H13Q5T200 1668 aaKnown RBP30.16■■■□□ 2.42
RETREG2-201ENST00000273048 C14orf93Q9H972 538 aaKnown RBP30.16■■■□□ 2.42
RETREG2-201ENST00000273048 RRAGDQ9NQL2 400 aaPredicted RBP30.16■■■□□ 2.42
RETREG2-201ENST00000273048 SETBP1Q9Y6X0 1596 aa30.16■■■□□ 2.42
RETREG2-201ENST00000273048 OSCARQ8IYS5 282 aa30.15■■■□□ 2.42
RETREG2-201ENST00000273048 C22orf23Q9BZE7 217 aa30.15■■■□□ 2.42
RETREG2-201ENST00000273048 GZF1Q9H116 711 aaPredicted RBP30.15■■■□□ 2.42
RETREG2-201ENST00000273048 CFAP65Q6ZU64 1925 aaKnown RBP30.14■■■□□ 2.41
RETREG2-201ENST00000273048 ADGRB3O60242 1522 aa30.13■■■□□ 2.41
RETREG2-201ENST00000273048 SMC4Q9NTJ3 1288 aa30.13■■■□□ 2.41
RETREG2-201ENST00000273048 MCM4P33991 863 aa30.13■■■□□ 2.41
RETREG2-201ENST00000273048 EXOSC9Q06265 439 aaKnown RBP30.12■■■□□ 2.41
RETREG2-201ENST00000273048 TRIM27P14373 513 aa30.11■■■□□ 2.41
RETREG2-201ENST00000273048 RSPH6AQ9H0K4 717 aa30.11■■■□□ 2.41
RETREG2-201ENST00000273048 ADGRB1O14514 1584 aa30.11■■■□□ 2.41
RETREG2-201ENST00000273048 NPM1P06748 294 aaKnown RBP eCLIP30.11■■■□□ 2.41
RETREG2-201ENST00000273048 XRCC6P12956 609 aaKnown RBP eCLIP30.1■■■□□ 2.418e-6■■□□□ 12.6
RETREG2-201ENST00000273048 ITPRIPQ8IWB1 547 aa30.1■■■□□ 2.41
RETREG2-201ENST00000273048 USP32Q8NFA0 1604 aa30.09■■■□□ 2.41
RETREG2-201ENST00000273048 GGT6Q6P531 493 aa30.09■■■□□ 2.41
RETREG2-201ENST00000273048 NUTM2DQ5VT03 806 aaPredicted RBP30.09■■■□□ 2.41
RETREG2-201ENST00000273048 SSH1Q8WYL5 1049 aa30.07■■■□□ 2.41
RETREG2-201ENST00000273048 GOLGA6L3A6NEY3 463 aa30.06■■■□□ 2.4
RETREG2-201ENST00000273048 CD109Q6YHK3 1445 aa30.06■■■□□ 2.4
RETREG2-201ENST00000273048 U2SURPO15042 1029 aaKnown RBP30.06■■■□□ 2.4
RETREG2-201ENST00000273048 CABP2Q9NPB3 220 aa30.05■■■□□ 2.4
RETREG2-201ENST00000273048 ADGRB2O60241 1585 aa30.05■■■□□ 2.4
RETREG2-201ENST00000273048 PANK2Q9BZ23 570 aa30.05■■■□□ 2.4
RETREG2-201ENST00000273048 CHMP5Q9NZZ3 219 aa30.05■■■□□ 2.4
RETREG2-201ENST00000273048 PPLO60437 1756 aa30.05■■■□□ 2.4
RETREG2-201ENST00000273048 HDAC1Q13547 482 aaPredicted RBP30.04■■■□□ 2.4
RETREG2-201ENST00000273048 FRMPD1Q5SYB0 1578 aa30.04■■■□□ 2.4
RETREG2-201ENST00000273048 POGZQ7Z3K3 1410 aa30.04■■■□□ 2.4
RETREG2-201ENST00000273048 FSD2A1L4K1 749 aa30.03■■■□□ 2.4
RETREG2-201ENST00000273048 ANKRD36BQ8N2N9 1353 aa30.03■■■□□ 2.4
RETREG2-201ENST00000273048 SAFB2Q14151 953 aaKnown RBP eCLIP30.03■■■□□ 2.4
RETREG2-201ENST00000273048 NPATQ14207 1427 aa30.03■■■□□ 2.4
RETREG2-201ENST00000273048 LMTK2Q8IWU2 1503 aa30.02■■■□□ 2.4
RETREG2-201ENST00000273048 NOB1Q9ULX3 412 aaKnown RBP30.02■■■□□ 2.4
RETREG2-201ENST00000273048 ATF7IPQ6VMQ6 1270 aa30.02■■■□□ 2.4
RETREG2-201ENST00000273048 DDX19BQ9UMR2 479 aa30.02■■■□□ 2.4
RETREG2-201ENST00000273048 TRIM35Q9UPQ4 493 aa30.02■■■□□ 2.4
RETREG2-201ENST00000273048 EVC2Q86UK5 1308 aa30.02■■■□□ 2.4
RETREG2-201ENST00000273048 TMPOP42166 694 aaKnown RBP30.01■■■□□ 2.4
RETREG2-201ENST00000273048 NCBP3Q53F19 620 aaKnown RBP30.01■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms