RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 LMTK2Q8IWU2 1503 aa13.51□□□□□ -0.25
CPNE9-201ENST00000273027 RXRBP28702 533 aa13.51□□□□□ -0.25
CPNE9-201ENST00000273027 CDCA8Q53HL2 280 aa13.51□□□□□ -0.25
CPNE9-201ENST00000273027 TET3O43151 1660 aa13.5□□□□□ -0.25
CPNE9-201ENST00000273027 TRPM2O94759 1503 aa13.5□□□□□ -0.25
CPNE9-201ENST00000273027 C14orf37Q86TY3 774 aa13.5□□□□□ -0.25
CPNE9-201ENST00000273027 SPHKAPQ2M3C7 1700 aa13.5□□□□□ -0.25
CPNE9-201ENST00000273027 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
CPNE9-201ENST00000273027 TMF1P82094 1093 aa13.49□□□□□ -0.25
CPNE9-201ENST00000273027 NUTM2BA6NNL0 878 aaPredicted RBP13.48□□□□□ -0.25
CPNE9-201ENST00000273027 NUTM2EB1AL46 878 aaPredicted RBP13.48□□□□□ -0.25
CPNE9-201ENST00000273027 NUTM2AQ8IVF1 878 aaPredicted RBP13.48□□□□□ -0.25
CPNE9-201ENST00000273027 KDM2AQ9Y2K7 1162 aa13.48□□□□□ -0.25
CPNE9-201ENST00000273027 KANK1Q14678 1352 aa13.47□□□□□ -0.25
CPNE9-201ENST00000273027 EFCAB6Q5THR3 1501 aa13.47□□□□□ -0.25
CPNE9-201ENST00000273027 LRP6O75581 1613 aa13.46□□□□□ -0.26
CPNE9-201ENST00000273027 NKTRP30414 1462 aaKnown RBP13.45□□□□□ -0.26
CPNE9-201ENST00000273027 PER1O15534 1290 aaPredicted RBP13.45□□□□□ -0.26
CPNE9-201ENST00000273027 POLR3GLQ9BT43 218 aa13.45□□□□□ -0.26
CPNE9-201ENST00000273027 ATF3P18847 181 aa13.44□□□□□ -0.26
CPNE9-201ENST00000273027 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
CPNE9-201ENST00000273027 NPC1L1Q9UHC9 1359 aa13.44□□□□□ -0.26
CPNE9-201ENST00000273027 MYO5BQ9ULV0 1848 aa13.43□□□□□ -0.26
CPNE9-201ENST00000273027 ADGRB3O60242 1522 aa13.43□□□□□ -0.26
CPNE9-201ENST00000273027 SRCAPQ6ZRS2 3230 aa13.43□□□□□ -0.26
CPNE9-201ENST00000273027 COL16A1Q07092 1604 aaPredicted RBP13.42□□□□□ -0.26
CPNE9-201ENST00000273027 NOS1P29475 1434 aa13.42□□□□□ -0.26
CPNE9-201ENST00000273027 HDGFP51858 240 aaKnown RBP13.42□□□□□ -0.26
CPNE9-201ENST00000273027 TESK2Q96S53 571 aa13.42□□□□□ -0.26
CPNE9-201ENST00000273027 C19orf44Q9H6X5 657 aa13.42□□□□□ -0.26
CPNE9-201ENST00000273027 BLMP54132 1417 aaPredicted RBP13.41□□□□□ -0.26
CPNE9-201ENST00000273027 CADPS2Q86UW7 1296 aa13.41□□□□□ -0.26
CPNE9-201ENST00000273027 NGEFQ8N5V2 710 aa13.41□□□□□ -0.26
CPNE9-201ENST00000273027 SLC52A1Q9NWF4 448 aa13.41□□□□□ -0.26
CPNE9-201ENST00000273027 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
CPNE9-201ENST00000273027 AFF2P51816 1311 aa13.4□□□□□ -0.26
CPNE9-201ENST00000273027 NUTM2DQ5VT03 806 aaPredicted RBP13.4□□□□□ -0.26
CPNE9-201ENST00000273027 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
CPNE9-201ENST00000273027 KIF1BO60333 1816 aa13.39□□□□□ -0.27
CPNE9-201ENST00000273027 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
CPNE9-201ENST00000273027 QTRT2Q9H974 415 aaKnown RBP13.39□□□□□ -0.27
CPNE9-201ENST00000273027 TBX22Q9Y458 520 aa13.39□□□□□ -0.27
CPNE9-201ENST00000273027 MYOM2P54296 1465 aa13.39□□□□□ -0.27
CPNE9-201ENST00000273027 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
CPNE9-201ENST00000273027 IRX6P78412 446 aaPredicted RBP13.38□□□□□ -0.27
CPNE9-201ENST00000273027 BRINP3Q76B58 766 aa13.38□□□□□ -0.27
CPNE9-201ENST00000273027 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
CPNE9-201ENST00000273027 CHGAP10645 457 aaKnown RBP13.37□□□□□ -0.27
CPNE9-201ENST00000273027 RGL3Q3MIN7 710 aa13.37□□□□□ -0.27
CPNE9-201ENST00000273027 C8orf37Q96NL8 207 aa13.37□□□□□ -0.27
CPNE9-201ENST00000273027 TMEM131LA2VDJ0 1609 aa13.37□□□□□ -0.27
CPNE9-201ENST00000273027 CDK12Q9NYV4 1490 aaPredicted RBP13.36□□□□□ -0.27
CPNE9-201ENST00000273027 CLTCL1P53675 1640 aa13.36□□□□□ -0.27
CPNE9-201ENST00000273027 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
CPNE9-201ENST00000273027 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
CPNE9-201ENST00000273027 RIMS2Q9UQ26 1411 aa13.36□□□□□ -0.27
CPNE9-201ENST00000273027 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
CPNE9-201ENST00000273027 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
CPNE9-201ENST00000273027 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
CPNE9-201ENST00000273027 RCAN3Q9UKA8 241 aa13.35□□□□□ -0.27
CPNE9-201ENST00000273027 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
CPNE9-201ENST00000273027 IFT172Q9UG01 1749 aa13.35□□□□□ -0.27
CPNE9-201ENST00000273027 SHPRHQ149N8 1683 aa13.34□□□□□ -0.27
CPNE9-201ENST00000273027 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
CPNE9-201ENST00000273027 SBNO2Q9Y2G9 1366 aa13.34□□□□□ -0.27
CPNE9-201ENST00000273027 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.34□□□□□ -0.27
CPNE9-201ENST00000273027 AHDC1Q5TGY3 1603 aaPredicted RBP13.34□□□□□ -0.27
CPNE9-201ENST00000273027 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
CPNE9-201ENST00000273027 ZFYVE9O95405 1425 aa13.33□□□□□ -0.28
CPNE9-201ENST00000273027 TCERG1O14776 1098 aaKnown RBP13.33□□□□□ -0.28
CPNE9-201ENST00000273027 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
CPNE9-201ENST00000273027 NGLY1Q96IV0 654 aa13.33□□□□□ -0.28
CPNE9-201ENST00000273027 PANK3Q9H999 370 aa13.33□□□□□ -0.28
CPNE9-201ENST00000273027 ZRANB1Q9UGI0 708 aa13.33□□□□□ -0.28
CPNE9-201ENST00000273027 AMOTL2Q9Y2J4 779 aa13.33□□□□□ -0.28
CPNE9-201ENST00000273027 KNSTRNQ9Y448 316 aa13.33□□□□□ -0.28
CPNE9-201ENST00000273027 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.33□□□□□ -0.28
CPNE9-201ENST00000273027 MS4A1P11836 297 aa13.32□□□□□ -0.28
CPNE9-201ENST00000273027 RGS12O14924 1447 aa13.31□□□□□ -0.28
CPNE9-201ENST00000273027 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
CPNE9-201ENST00000273027 DDX17Q92841 729 aaKnown RBP13.31□□□□□ -0.28
CPNE9-201ENST00000273027 DIP2AQ14689 1571 aa13.31□□□□□ -0.28
CPNE9-201ENST00000273027 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
CPNE9-201ENST00000273027 MYOM1P52179 1685 aa13.29□□□□□ -0.28
CPNE9-201ENST00000273027 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
CPNE9-201ENST00000273027 ANP32AP39687 249 aaKnown RBP13.28□□□□□ -0.28
CPNE9-201ENST00000273027 ATAD2Q6PL18 1390 aa13.28□□□□□ -0.28
CPNE9-201ENST00000273027 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
CPNE9-201ENST00000273027 PUS7Q96PZ0 661 aaKnown RBP13.27□□□□□ -0.29
CPNE9-201ENST00000273027 RPGRIP1LQ68CZ1 1315 aa13.27□□□□□ -0.29
CPNE9-201ENST00000273027 PIK3R4Q99570 1358 aa13.27□□□□□ -0.29
CPNE9-201ENST00000273027 WDR43Q15061 677 aaKnown RBP eCLIP13.26□□□□□ -0.29
CPNE9-201ENST00000273027 MSH5O43196 834 aa13.25□□□□□ -0.29
CPNE9-201ENST00000273027 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
CPNE9-201ENST00000273027 USP21Q9UK80 565 aa13.25□□□□□ -0.29
CPNE9-201ENST00000273027 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
CPNE9-201ENST00000273027 PNPLA6Q8IY17 1366 aa13.24□□□□□ -0.29
CPNE9-201ENST00000273027 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
CPNE9-201ENST00000273027 USP32Q8NFA0 1604 aa13.24□□□□□ -0.29
CPNE9-201ENST00000273027 PPP2R1AP30153 589 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms