RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 MRE11P49959 708 aa13.66□□□□□ -0.22
CNGA3-201ENST00000272602 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
CNGA3-201ENST00000272602 NOS1P29475 1434 aa13.66□□□□□ -0.22
CNGA3-201ENST00000272602 CABP1Q9NZU7 370 aa13.66□□□□□ -0.22
CNGA3-201ENST00000272602 THEMISQ8N1K5 641 aaPredicted RBP13.65□□□□□ -0.22
CNGA3-201ENST00000272602 HSCBQ8IWL3 235 aa13.65□□□□□ -0.22
CNGA3-201ENST00000272602 GRPEL1Q9HAV7 217 aa13.65□□□□□ -0.22
CNGA3-201ENST00000272602 LTKP29376 864 aa13.65□□□□□ -0.23
CNGA3-201ENST00000272602 NCLP19338 710 aaKnown RBP13.64□□□□□ -0.23
CNGA3-201ENST00000272602 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
CNGA3-201ENST00000272602 DDX17Q92841 729 aaKnown RBP13.64□□□□□ -0.23
CNGA3-201ENST00000272602 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
CNGA3-201ENST00000272602 SLC52A1Q9NWF4 448 aa13.64□□□□□ -0.23
CNGA3-201ENST00000272602 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
CNGA3-201ENST00000272602 A0A0U1RQG5 324 aaPredicted RBP13.63□□□□□ -0.23
CNGA3-201ENST00000272602 PER1O15534 1290 aaPredicted RBP13.63□□□□□ -0.23
CNGA3-201ENST00000272602 CHMP5Q9NZZ3 219 aa13.63□□□□□ -0.23
CNGA3-201ENST00000272602 PARD3Q8TEW0 1356 aa13.63□□□□□ -0.23
CNGA3-201ENST00000272602 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
CNGA3-201ENST00000272602 PODXL2Q9NZ53 605 aa13.63□□□□□ -0.23
CNGA3-201ENST00000272602 ANKLE2Q86XL3 938 aa13.63□□□□□ -0.23
CNGA3-201ENST00000272602 FAM13BQ9NYF5 915 aa13.63□□□□□ -0.23
CNGA3-201ENST00000272602 AMOTL2Q9Y2J4 779 aa13.63□□□□□ -0.23
CNGA3-201ENST00000272602 USP19O94966 1318 aa13.62□□□□□ -0.23
CNGA3-201ENST00000272602 PPP2R1AP30153 589 aa13.62□□□□□ -0.23
CNGA3-201ENST00000272602 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
CNGA3-201ENST00000272602 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
CNGA3-201ENST00000272602 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
CNGA3-201ENST00000272602 UHRF1BP1LA0JNW5 1464 aa13.62□□□□□ -0.23
CNGA3-201ENST00000272602 POGZQ7Z3K3 1410 aa13.61□□□□□ -0.23
CNGA3-201ENST00000272602 PZPP20742 1482 aa13.61□□□□□ -0.23
CNGA3-201ENST00000272602 HSP90AB1P08238 724 aaKnown RBP13.61□□□□□ -0.23
CNGA3-201ENST00000272602 CDK19Q9BWU1 502 aa13.61□□□□□ -0.23
CNGA3-201ENST00000272602 TCOF1Q13428 1488 aaKnown RBP13.61□□□□□ -0.23
CNGA3-201ENST00000272602 FOXO3O43524 673 aa13.61□□□□□ -0.23
CNGA3-201ENST00000272602 KIAA1211Q6ZU35 1233 aa13.61□□□□□ -0.23
CNGA3-201ENST00000272602 MSNP26038 577 aaKnown RBP13.6□□□□□ -0.23
CNGA3-201ENST00000272602 CDC42BPAQ5VT25 1732 aa13.6□□□□□ -0.23
CNGA3-201ENST00000272602 C22orf23Q9BZE7 217 aa13.6□□□□□ -0.23
CNGA3-201ENST00000272602 ATP7AQ04656 1500 aa13.6□□□□□ -0.23
CNGA3-201ENST00000272602 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
CNGA3-201ENST00000272602 FAM135AQ9P2D6 1515 aa13.59□□□□□ -0.23
CNGA3-201ENST00000272602 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
CNGA3-201ENST00000272602 ZNF428Q96B54 188 aa13.58□□□□□ -0.24
CNGA3-201ENST00000272602 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
CNGA3-201ENST00000272602 E9PSI1 815 aa13.58□□□□□ -0.24
CNGA3-201ENST00000272602 TBC1D32Q96NH3 1257 aa13.58□□□□□ -0.24
CNGA3-201ENST00000272602 ANTXR1Q9H6X2 564 aa13.57□□□□□ -0.24
CNGA3-201ENST00000272602 U2AF1L5P0DN76 240 aaPredicted RBP13.57□□□□□ -0.24
CNGA3-201ENST00000272602 U2AF1Q01081 240 aaKnown RBP eCLIP13.57□□□□□ -0.24
CNGA3-201ENST00000272602 PSME1Q06323 249 aa13.57□□□□□ -0.24
CNGA3-201ENST00000272602 TNNQ9UQP3 1299 aa13.57□□□□□ -0.24
CNGA3-201ENST00000272602 GCC2Q8IWJ2 1684 aa13.57□□□□□ -0.24
CNGA3-201ENST00000272602 MYO5CQ9NQX4 1742 aa13.57□□□□□ -0.24
CNGA3-201ENST00000272602 ITSN2Q9NZM3 1697 aa13.57□□□□□ -0.24
CNGA3-201ENST00000272602 RWDD1Q9H446 243 aaPredicted RBP13.56□□□□□ -0.24
CNGA3-201ENST00000272602 DNMT1P26358 1616 aaKnown RBP13.56□□□□□ -0.24
CNGA3-201ENST00000272602 DISP3Q9P2K9 1392 aa13.56□□□□□ -0.24
CNGA3-201ENST00000272602 KCNA6P17658 529 aa13.56□□□□□ -0.24
CNGA3-201ENST00000272602 CDC42BPBQ9Y5S2 1711 aa13.56□□□□□ -0.24
CNGA3-201ENST00000272602 ERBB4Q15303 1308 aa13.56□□□□□ -0.24
CNGA3-201ENST00000272602 NUTM2BA6NNL0 878 aaPredicted RBP13.56□□□□□ -0.24
CNGA3-201ENST00000272602 NUTM2EB1AL46 878 aaPredicted RBP13.56□□□□□ -0.24
CNGA3-201ENST00000272602 HDGFL2Q7Z4V5 671 aaPredicted RBP13.56□□□□□ -0.24
CNGA3-201ENST00000272602 NUTM2AQ8IVF1 878 aaPredicted RBP13.56□□□□□ -0.24
CNGA3-201ENST00000272602 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
CNGA3-201ENST00000272602 R3HCC1Q9Y3T6 440 aaKnown RBP13.55□□□□□ -0.24
CNGA3-201ENST00000272602 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
CNGA3-201ENST00000272602 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
CNGA3-201ENST00000272602 TNRQ92752 1358 aa13.55□□□□□ -0.24
CNGA3-201ENST00000272602 HMOX1P09601 288 aa13.55□□□□□ -0.24
CNGA3-201ENST00000272602 RRS1Q15050 365 aaKnown RBP13.55□□□□□ -0.24
CNGA3-201ENST00000272602 SHROOM2Q13796 1616 aa13.55□□□□□ -0.24
CNGA3-201ENST00000272602 GBP4Q96PP9 640 aa13.55□□□□□ -0.24
CNGA3-201ENST00000272602 PCDHB15Q9Y5E8 787 aa13.55□□□□□ -0.24
CNGA3-201ENST00000272602 FSD2A1L4K1 749 aa13.54□□□□□ -0.24
CNGA3-201ENST00000272602 NPATQ14207 1427 aa13.54□□□□□ -0.24
CNGA3-201ENST00000272602 RALGAPBQ86X10 1494 aa13.53□□□□□ -0.24
CNGA3-201ENST00000272602 ATP10AO60312 1499 aa13.53□□□□□ -0.24
CNGA3-201ENST00000272602 EVC2Q86UK5 1308 aa13.53□□□□□ -0.24
CNGA3-201ENST00000272602 KDM5CP41229 1560 aa13.53□□□□□ -0.24
CNGA3-201ENST00000272602 GOLGA6L22H0YM25 854 aa13.53□□□□□ -0.24
CNGA3-201ENST00000272602 TPM2P07951 284 aa13.53□□□□□ -0.24
CNGA3-201ENST00000272602 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
CNGA3-201ENST00000272602 ELL2O00472 640 aaPredicted RBP13.52□□□□□ -0.24
CNGA3-201ENST00000272602 CSB-PGBD3P0DP91 1061 aa13.52□□□□□ -0.24
CNGA3-201ENST00000272602 NLRP6P59044 892 aa13.52□□□□□ -0.24
CNGA3-201ENST00000272602 PDE3AQ14432 1141 aa13.52□□□□□ -0.24
CNGA3-201ENST00000272602 DUOX2Q9NRD8 1548 aa13.52□□□□□ -0.24
CNGA3-201ENST00000272602 CABLES1Q8TDN4 633 aa13.52□□□□□ -0.25
CNGA3-201ENST00000272602 PDCL3Q9H2J4 239 aa13.52□□□□□ -0.25
CNGA3-201ENST00000272602 ATF3P18847 181 aa13.52□□□□□ -0.25
CNGA3-201ENST00000272602 DDX49Q9Y6V7 483 aaKnown RBP13.52□□□□□ -0.25
CNGA3-201ENST00000272602 NASPP49321 788 aaPredicted RBP13.51□□□□□ -0.25
CNGA3-201ENST00000272602 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.51□□□□□ -0.25
CNGA3-201ENST00000272602 ABCC1P33527 1531 aa13.5□□□□□ -0.25
CNGA3-201ENST00000272602 EIF3AQ14152 1382 aaKnown RBP13.5□□□□□ -0.25
CNGA3-201ENST00000272602 GAS2L3Q86XJ1 694 aa13.5□□□□□ -0.25
CNGA3-201ENST00000272602 BLMP54132 1417 aaPredicted RBP13.5□□□□□ -0.25
CNGA3-201ENST00000272602 ABTB2Q8N961 1025 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms