RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 C11orf95C9JLR9 678 aaPredicted RBP11.91□□□□□ -0.5
TRIM43-201ENST00000272395 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
TRIM43-201ENST00000272395 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
TRIM43-201ENST00000272395 NKTRP30414 1462 aaKnown RBP11.9□□□□□ -0.5
TRIM43-201ENST00000272395 CHD2O14647 1828 aaKnown RBP11.9□□□□□ -0.5
TRIM43-201ENST00000272395 ROCK2O75116 1388 aaKnown RBP11.9□□□□□ -0.5
TRIM43-201ENST00000272395 WAPLQ7Z5K2 1190 aa11.9□□□□□ -0.5
TRIM43-201ENST00000272395 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
TRIM43-201ENST00000272395 ABCC11Q96J66 1382 aa11.89□□□□□ -0.51
TRIM43-201ENST00000272395 SAFB2Q14151 953 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIM43-201ENST00000272395 TRPM1Q7Z4N2 1603 aa11.88□□□□□ -0.51
TRIM43-201ENST00000272395 USP47Q96K76 1375 aa11.88□□□□□ -0.51
TRIM43-201ENST00000272395 PTCH1Q13635 1447 aa11.88□□□□□ -0.51
TRIM43-201ENST00000272395 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
TRIM43-201ENST00000272395 C14orf37Q86TY3 774 aa11.87□□□□□ -0.51
TRIM43-201ENST00000272395 PRAM1Q96QH2 718 aa11.87□□□□□ -0.51
TRIM43-201ENST00000272395 TECPR2O15040 1411 aa11.87□□□□□ -0.51
TRIM43-201ENST00000272395 ZBED9Q6R2W3 1325 aa11.87□□□□□ -0.51
TRIM43-201ENST00000272395 KIAA1210Q9ULL0 1709 aa11.86□□□□□ -0.51
TRIM43-201ENST00000272395 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
TRIM43-201ENST00000272395 MRS2Q9HD23 443 aa11.85□□□□□ -0.51
TRIM43-201ENST00000272395 POGKQ9P215 609 aa11.85□□□□□ -0.51
TRIM43-201ENST00000272395 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
TRIM43-201ENST00000272395 FAM135BQ49AJ0 1406 aa11.84□□□□□ -0.51
TRIM43-201ENST00000272395 SLC24A1O60721 1099 aa11.84□□□□□ -0.51
TRIM43-201ENST00000272395 KNDC1Q76NI1 1749 aa11.83□□□□□ -0.52
TRIM43-201ENST00000272395 DLC1Q96QB1 1528 aa11.83□□□□□ -0.52
TRIM43-201ENST00000272395 KTN1Q86UP2 1357 aaKnown RBP11.83□□□□□ -0.52
TRIM43-201ENST00000272395 XIRP1Q702N8 1843 aaKnown RBP11.83□□□□□ -0.52
TRIM43-201ENST00000272395 ADGRL3Q9HAR2 1447 aa11.82□□□□□ -0.52
TRIM43-201ENST00000272395 MSH6P52701 1360 aa11.82□□□□□ -0.52
TRIM43-201ENST00000272395 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
TRIM43-201ENST00000272395 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
TRIM43-201ENST00000272395 UBAP1LF5GYI3 381 aa11.81□□□□□ -0.52
TRIM43-201ENST00000272395 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
TRIM43-201ENST00000272395 C19orf44Q9H6X5 657 aa11.81□□□□□ -0.52
TRIM43-201ENST00000272395 NCOA3Q9Y6Q9 1424 aa11.81□□□□□ -0.52
TRIM43-201ENST00000272395 IQSEC2Q5JU85 1478 aa11.8□□□□□ -0.52
TRIM43-201ENST00000272395 NALCNQ8IZF0 1738 aa11.8□□□□□ -0.52
TRIM43-201ENST00000272395 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.8□□□□□ -0.52
TRIM43-201ENST00000272395 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
TRIM43-201ENST00000272395 ATF3P18847 181 aa11.8□□□□□ -0.52
TRIM43-201ENST00000272395 ARHGEF28Q8N1W1 1705 aaKnown RBP11.8□□□□□ -0.52
TRIM43-201ENST00000272395 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
TRIM43-201ENST00000272395 PIP4K2BP78356 416 aa11.79□□□□□ -0.52
TRIM43-201ENST00000272395 FAM9BQ8IZU0 186 aa11.79□□□□□ -0.52
TRIM43-201ENST00000272395 PPP4R2Q9NY27 417 aa11.78□□□□□ -0.52
TRIM43-201ENST00000272395 EIF3AQ14152 1382 aaKnown RBP11.78□□□□□ -0.52
TRIM43-201ENST00000272395 SMG6Q86US8 1419 aaKnown RBP11.78□□□□□ -0.52
TRIM43-201ENST00000272395 ST20-MTHFSA0A0A6YYL1 179 aa11.77□□□□□ -0.53
TRIM43-201ENST00000272395 TOM1O60784 492 aa11.77□□□□□ -0.53
TRIM43-201ENST00000272395 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
TRIM43-201ENST00000272395 DCCP43146 1447 aa11.76□□□□□ -0.53
TRIM43-201ENST00000272395 SLAIN2Q9P270 581 aa11.76□□□□□ -0.53
TRIM43-201ENST00000272395 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
TRIM43-201ENST00000272395 MST1RQ04912 1400 aa11.76□□□□□ -0.53
TRIM43-201ENST00000272395 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
TRIM43-201ENST00000272395 WASLO00401 505 aaPredicted RBP11.75□□□□□ -0.53
TRIM43-201ENST00000272395 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
TRIM43-201ENST00000272395 ADGRB2O60241 1585 aa11.74□□□□□ -0.53
TRIM43-201ENST00000272395 C1orf167Q5SNV9 1468 aa11.74□□□□□ -0.53
TRIM43-201ENST00000272395 BRD4O60885 1362 aaPredicted RBP11.74□□□□□ -0.53
TRIM43-201ENST00000272395 CDK19Q9BWU1 502 aa11.74□□□□□ -0.53
TRIM43-201ENST00000272395 RALBP1Q15311 655 aa11.73□□□□□ -0.53
TRIM43-201ENST00000272395 FBXO41Q8TF61 875 aa11.73□□□□□ -0.53
TRIM43-201ENST00000272395 TESK2Q96S53 571 aa11.73□□□□□ -0.53
TRIM43-201ENST00000272395 ORAI2Q96SN7 254 aa11.73□□□□□ -0.53
TRIM43-201ENST00000272395 ANP32EQ9BTT0 268 aa11.73□□□□□ -0.53
TRIM43-201ENST00000272395 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
TRIM43-201ENST00000272395 TULP4Q9NRJ4 1543 aa11.73□□□□□ -0.53
TRIM43-201ENST00000272395 PRR36Q9H6K5 1346 aa11.73□□□□□ -0.53
TRIM43-201ENST00000272395 SRPK2P78362 688 aaKnown RBP11.71□□□□□ -0.53
TRIM43-201ENST00000272395 ESCO1Q5FWF5 840 aa11.71□□□□□ -0.53
TRIM43-201ENST00000272395 BRINP3Q76B58 766 aa11.71□□□□□ -0.53
TRIM43-201ENST00000272395 DDX17Q92841 729 aaKnown RBP11.71□□□□□ -0.53
TRIM43-201ENST00000272395 KCNA4P22459 653 aa11.71□□□□□ -0.54
TRIM43-201ENST00000272395 PNISRQ8TF01 805 aaKnown RBP11.71□□□□□ -0.54
TRIM43-201ENST00000272395 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
TRIM43-201ENST00000272395 MYBBP1AQ9BQG0 1328 aaKnown RBP11.7□□□□□ -0.54
TRIM43-201ENST00000272395 FMN2Q9NZ56 1722 aa11.7□□□□□ -0.54
TRIM43-201ENST00000272395 NUDT16Q96DE0 195 aaKnown RBP11.7□□□□□ -0.54
TRIM43-201ENST00000272395 NUDCQ9Y266 331 aa11.7□□□□□ -0.54
TRIM43-201ENST00000272395 RNF123Q5XPI4 1314 aa11.7□□□□□ -0.54
TRIM43-201ENST00000272395 DISP3Q9P2K9 1392 aa11.7□□□□□ -0.54
TRIM43-201ENST00000272395 SBNO2Q9Y2G9 1366 aa11.7□□□□□ -0.54
TRIM43-201ENST00000272395 TMC1Q8TDI8 760 aa11.69□□□□□ -0.54
TRIM43-201ENST00000272395 FANCIQ9NVI1 1328 aa11.69□□□□□ -0.54
TRIM43-201ENST00000272395 USP32Q8NFA0 1604 aa11.69□□□□□ -0.54
TRIM43-201ENST00000272395 ANKARQ7Z5J8 1434 aa11.69□□□□□ -0.54
TRIM43-201ENST00000272395 ROBO1Q9Y6N7 1651 aa11.69□□□□□ -0.54
TRIM43-201ENST00000272395 ATP7BP35670 1465 aa11.69□□□□□ -0.54
TRIM43-201ENST00000272395 PMFBP1Q8TBY8 1022 aa11.68□□□□□ -0.54
TRIM43-201ENST00000272395 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
TRIM43-201ENST00000272395 INSRP06213 1382 aa11.68□□□□□ -0.54
TRIM43-201ENST00000272395 HSPA1LP34931 641 aa11.68□□□□□ -0.54
TRIM43-201ENST00000272395 IRX6P78412 446 aaPredicted RBP11.68□□□□□ -0.54
TRIM43-201ENST00000272395 XPCQ01831 940 aaPredicted RBP11.68□□□□□ -0.54
TRIM43-201ENST00000272395 ILDR1Q86SU0 546 aaPredicted RBP11.68□□□□□ -0.54
TRIM43-201ENST00000272395 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
TRIM43-201ENST00000272395 FOXO3O43524 673 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms