RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 EVC2Q86UK5 1308 aa17.1■□□□□ 0.33
CAPN9-201ENST00000271971 CABP2Q9NPB3 220 aa17.09■□□□□ 0.33
CAPN9-201ENST00000271971 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.33
CAPN9-201ENST00000271971 TECPR2O15040 1411 aa17.08■□□□□ 0.32
CAPN9-201ENST00000271971 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
CAPN9-201ENST00000271971 PTPRUQ92729 1446 aa17.08■□□□□ 0.32
CAPN9-201ENST00000271971 KTN1Q86UP2 1357 aaKnown RBP17.07■□□□□ 0.32
CAPN9-201ENST00000271971 DIP2AQ14689 1571 aa17.07■□□□□ 0.32
CAPN9-201ENST00000271971 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
CAPN9-201ENST00000271971 SRPK2P78362 688 aaKnown RBP17.06■□□□□ 0.32
CAPN9-201ENST00000271971 SLC12A5Q9H2X9 1139 aa17.06■□□□□ 0.32
CAPN9-201ENST00000271971 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
CAPN9-201ENST00000271971 PARD3Q8TEW0 1356 aa17.05■□□□□ 0.32
CAPN9-201ENST00000271971 KNSTRNQ9Y448 316 aa17.04■□□□□ 0.32
CAPN9-201ENST00000271971 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
CAPN9-201ENST00000271971 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
CAPN9-201ENST00000271971 ANKLE2Q86XL3 938 aa17.03■□□□□ 0.32
CAPN9-201ENST00000271971 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.03■□□□□ 0.32
CAPN9-201ENST00000271971 RALBP1Q15311 655 aa17.02■□□□□ 0.32
CAPN9-201ENST00000271971 AMER1Q5JTC6 1135 aaPredicted RBP17.02■□□□□ 0.32
CAPN9-201ENST00000271971 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
CAPN9-201ENST00000271971 TBX22Q9Y458 520 aa17.02■□□□□ 0.32
CAPN9-201ENST00000271971 XRN1Q8IZH2 1706 aaKnown RBP17.02■□□□□ 0.31
CAPN9-201ENST00000271971 MYBBP1AQ9BQG0 1328 aaKnown RBP17.01■□□□□ 0.31
CAPN9-201ENST00000271971 NSD3Q9BZ95 1437 aa17.01■□□□□ 0.31
CAPN9-201ENST00000271971 AMOTL2Q9Y2J4 779 aa17■□□□□ 0.31
CAPN9-201ENST00000271971 SUPT16HQ9Y5B9 1047 aaKnown RBP17■□□□□ 0.31
CAPN9-201ENST00000271971 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
CAPN9-201ENST00000271971 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
CAPN9-201ENST00000271971 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
CAPN9-201ENST00000271971 FAM9BQ8IZU0 186 aa16.99■□□□□ 0.31
CAPN9-201ENST00000271971 SIRT1Q96EB6 747 aa16.98■□□□□ 0.31
CAPN9-201ENST00000271971 ANP32EQ9BTT0 268 aa16.98■□□□□ 0.31
CAPN9-201ENST00000271971 CHD2O14647 1828 aaKnown RBP16.97■□□□□ 0.31
CAPN9-201ENST00000271971 ANKRD36BQ8N2N9 1353 aa16.97■□□□□ 0.31
CAPN9-201ENST00000271971 PTCH1Q13635 1447 aa16.97■□□□□ 0.31
CAPN9-201ENST00000271971 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
CAPN9-201ENST00000271971 ADGRB2O60241 1585 aa16.97■□□□□ 0.31
CAPN9-201ENST00000271971 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
CAPN9-201ENST00000271971 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
CAPN9-201ENST00000271971 TSHZ2Q9NRE2 1034 aa16.96■□□□□ 0.31
CAPN9-201ENST00000271971 CD163L1Q9NR16 1453 aa16.96■□□□□ 0.31
CAPN9-201ENST00000271971 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.31
CAPN9-201ENST00000271971 BCL11AQ9H165 835 aa16.96■□□□□ 0.31
CAPN9-201ENST00000271971 USP32Q8NFA0 1604 aa16.96■□□□□ 0.31
CAPN9-201ENST00000271971 NINLQ9Y2I6 1382 aa16.95■□□□□ 0.3
CAPN9-201ENST00000271971 KCNA6P17658 529 aa16.95■□□□□ 0.3
CAPN9-201ENST00000271971 BRD4O60885 1362 aaPredicted RBP16.95■□□□□ 0.3
CAPN9-201ENST00000271971 NLRP13Q86W25 1043 aa16.94■□□□□ 0.3
CAPN9-201ENST00000271971 NPC1L1Q9UHC9 1359 aa16.94■□□□□ 0.3
CAPN9-201ENST00000271971 CABP1Q9NZU7 370 aa16.94■□□□□ 0.3
CAPN9-201ENST00000271971 PIK3R4Q99570 1358 aa16.93■□□□□ 0.3
CAPN9-201ENST00000271971 ATP7BP35670 1465 aa16.92■□□□□ 0.3
CAPN9-201ENST00000271971 PPIP5K1Q6PFW1 1433 aa16.91■□□□□ 0.3
CAPN9-201ENST00000271971 PRR36Q9H6K5 1346 aa16.91■□□□□ 0.3
CAPN9-201ENST00000271971 NUTM2FA1L443 756 aa16.91■□□□□ 0.3
CAPN9-201ENST00000271971 PPP2R1AP30153 589 aa16.91■□□□□ 0.3
CAPN9-201ENST00000271971 HSPA2P54652 639 aa16.91■□□□□ 0.3
CAPN9-201ENST00000271971 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
CAPN9-201ENST00000271971 TOPAZ1Q8N9V7 1692 aa16.9■□□□□ 0.3
CAPN9-201ENST00000271971 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
CAPN9-201ENST00000271971 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
CAPN9-201ENST00000271971 RGPD8O14715 1765 aaPredicted RBP16.9■□□□□ 0.3
CAPN9-201ENST00000271971 PNISRQ8TF01 805 aaKnown RBP16.89■□□□□ 0.3
CAPN9-201ENST00000271971 ITSN1Q15811 1721 aa16.89■□□□□ 0.29
CAPN9-201ENST00000271971 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
CAPN9-201ENST00000271971 CGNL1Q0VF96 1302 aa16.89■□□□□ 0.29
CAPN9-201ENST00000271971 KIF20BQ96Q89 1820 aa16.88■□□□□ 0.29
CAPN9-201ENST00000271971 RBM33Q96EV2 1170 aaKnown RBP16.88■□□□□ 0.29
CAPN9-201ENST00000271971 CDC42BPGQ6DT37 1551 aa16.88■□□□□ 0.29
CAPN9-201ENST00000271971 AKAP12Q02952 1782 aa16.87■□□□□ 0.29
CAPN9-201ENST00000271971 LMTK3Q96Q04 1460 aa16.87■□□□□ 0.29
CAPN9-201ENST00000271971 ANKRD26Q9UPS8 1709 aa16.87■□□□□ 0.29
CAPN9-201ENST00000271971 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
CAPN9-201ENST00000271971 HDGFL2Q7Z4V5 671 aaPredicted RBP16.87■□□□□ 0.29
CAPN9-201ENST00000271971 MON2Q7Z3U7 1717 aa16.86■□□□□ 0.29
CAPN9-201ENST00000271971 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
CAPN9-201ENST00000271971 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
CAPN9-201ENST00000271971 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
CAPN9-201ENST00000271971 NKTRP30414 1462 aaKnown RBP16.85■□□□□ 0.29
CAPN9-201ENST00000271971 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
CAPN9-201ENST00000271971 CPSF1Q10570 1443 aaKnown RBP16.84■□□□□ 0.29
CAPN9-201ENST00000271971 FMN2Q9NZ56 1722 aa16.84■□□□□ 0.29
CAPN9-201ENST00000271971 GGNBP2Q9H3C7 697 aa16.84■□□□□ 0.29
CAPN9-201ENST00000271971 NSD2O96028 1365 aa16.83■□□□□ 0.28
CAPN9-201ENST00000271971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.82■□□□□ 0.28
CAPN9-201ENST00000271971 STRCP1A6NGW2 1772 aa16.82■□□□□ 0.28
CAPN9-201ENST00000271971 STRCQ7RTU9 1775 aa16.82■□□□□ 0.28
CAPN9-201ENST00000271971 FYB1O15117 783 aa16.81■□□□□ 0.28
CAPN9-201ENST00000271971 NRKQ7Z2Y5 1582 aa16.8■□□□□ 0.28
CAPN9-201ENST00000271971 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
CAPN9-201ENST00000271971 ADGRL3Q9HAR2 1447 aa16.78■□□□□ 0.28
CAPN9-201ENST00000271971 ACEP12821 1306 aa16.78■□□□□ 0.28
CAPN9-201ENST00000271971 PMFBP1Q8TBY8 1022 aa16.78■□□□□ 0.28
CAPN9-201ENST00000271971 SHPRHQ149N8 1683 aa16.76■□□□□ 0.27
CAPN9-201ENST00000271971 C14orf37Q86TY3 774 aa16.76■□□□□ 0.27
CAPN9-201ENST00000271971 NME9Q86XW9 330 aa16.76■□□□□ 0.27
CAPN9-201ENST00000271971 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
CAPN9-201ENST00000271971 ZRANB1Q9UGI0 708 aa16.75■□□□□ 0.27
CAPN9-201ENST00000271971 ANKARQ7Z5J8 1434 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms