RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 NUTM2GQ5VZR2 741 aa16.26■□□□□ 0.19
SMG9-201ENST00000270066 DDX11L8A8MPP1 907 aa16.25■□□□□ 0.19
SMG9-201ENST00000270066 RIC3Q7Z5B4 369 aa16.25■□□□□ 0.19
SMG9-201ENST00000270066 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
SMG9-201ENST00000270066 TIAM1Q13009 1591 aa16.25■□□□□ 0.19
SMG9-201ENST00000270066 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
SMG9-201ENST00000270066 PLEKHO1Q53GL0 409 aaPredicted RBP16.23■□□□□ 0.19
SMG9-201ENST00000270066 RNF20Q5VTR2 975 aa16.23■□□□□ 0.19
SMG9-201ENST00000270066 MTHFSP49914 203 aa16.23■□□□□ 0.19
SMG9-201ENST00000270066 ERC2O15083 957 aa16.23■□□□□ 0.19
SMG9-201ENST00000270066 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
SMG9-201ENST00000270066 DAPK1P53355 1430 aa16.23■□□□□ 0.19
SMG9-201ENST00000270066 ANO8Q9HCE9 1232 aaPredicted RBP16.22■□□□□ 0.19
SMG9-201ENST00000270066 WASHC2AQ641Q2 1341 aa16.22■□□□□ 0.19
SMG9-201ENST00000270066 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
SMG9-201ENST00000270066 APPP05067 770 aa16.21■□□□□ 0.19
SMG9-201ENST00000270066 TRDNQ13061 729 aa16.21■□□□□ 0.19
SMG9-201ENST00000270066 IQGAP2Q13576 1575 aa16.21■□□□□ 0.19
SMG9-201ENST00000270066 TRIM29Q14134 588 aa16.21■□□□□ 0.19
SMG9-201ENST00000270066 ANO2Q9NQ90 1003 aa16.21■□□□□ 0.19
SMG9-201ENST00000270066 RBM33Q96EV2 1170 aaKnown RBP16.2■□□□□ 0.18
SMG9-201ENST00000270066 CTDP1Q9Y5B0 961 aaPredicted RBP16.2■□□□□ 0.18
SMG9-201ENST00000270066 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
SMG9-201ENST00000270066 CCDC30Q5VVM6 783 aa16.19■□□□□ 0.18
SMG9-201ENST00000270066 ANKLE2Q86XL3 938 aa16.19■□□□□ 0.18
SMG9-201ENST00000270066 CUL7Q14999 1698 aa16.19■□□□□ 0.18
SMG9-201ENST00000270066 UBTFL1P0CB47 393 aaPredicted RBP16.19■□□□□ 0.18
SMG9-201ENST00000270066 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
SMG9-201ENST00000270066 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
SMG9-201ENST00000270066 CDK19Q9BWU1 502 aa16.19■□□□□ 0.18
SMG9-201ENST00000270066 ERBINQ96RT1 1412 aa16.18■□□□□ 0.18
SMG9-201ENST00000270066 PPP2R1AP30153 589 aa16.18■□□□□ 0.18
SMG9-201ENST00000270066 AIMP1Q12904 312 aaKnown RBP16.18■□□□□ 0.18
SMG9-201ENST00000270066 INTS3Q68E01 1043 aaKnown RBP16.18■□□□□ 0.18
SMG9-201ENST00000270066 CREBRFQ8IUR6 639 aa16.18■□□□□ 0.18
SMG9-201ENST00000270066 NOC3LQ8WTT2 800 aaKnown RBP16.18■□□□□ 0.18
SMG9-201ENST00000270066 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
SMG9-201ENST00000270066 FBXW7Q969H0 707 aa16.18■□□□□ 0.18
SMG9-201ENST00000270066 EPRSP07814 1512 aaKnown RBP16.17■□□□□ 0.18
SMG9-201ENST00000270066 TNNT3P45378 269 aaPredicted RBP16.17■□□□□ 0.18
SMG9-201ENST00000270066 CPLX1O14810 134 aa16.17■□□□□ 0.18
SMG9-201ENST00000270066 SKOR2Q2VWA4 1001 aaPredicted RBP16.17■□□□□ 0.18
SMG9-201ENST00000270066 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
SMG9-201ENST00000270066 TPD52L1Q16890 204 aaPredicted RBP16.17■□□□□ 0.18
SMG9-201ENST00000270066 WWC1Q8IX03 1113 aa16.17■□□□□ 0.18
SMG9-201ENST00000270066 RTEL1-TNFRSF6BF6WH68 1400 aa16.17■□□□□ 0.18
SMG9-201ENST00000270066 ERICH2A1L162 156 aa16.16■□□□□ 0.18
SMG9-201ENST00000270066 RAPGEF3O95398 923 aa16.16■□□□□ 0.18
SMG9-201ENST00000270066 ADAMTS8Q9UP79 889 aa16.16■□□□□ 0.18
SMG9-201ENST00000270066 MCTP1Q6DN14 999 aa16.16■□□□□ 0.18
SMG9-201ENST00000270066 TCP11L2Q8N4U5 519 aa16.16■□□□□ 0.18
SMG9-201ENST00000270066 PRKAR2BP31323 418 aa16.15■□□□□ 0.18
SMG9-201ENST00000270066 TCEAL9Q9UHQ7 104 aa16.15■□□□□ 0.18
SMG9-201ENST00000270066 GNAI3P08754 354 aa16.15■□□□□ 0.18
SMG9-201ENST00000270066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.185e-6■■■■■ 46.2
SMG9-201ENST00000270066 NBPF1Q3BBV0 1214 aa16.15■□□□□ 0.18
SMG9-201ENST00000270066 RAD21O60216 631 aa16.14■□□□□ 0.18
SMG9-201ENST00000270066 TPM3P06753 285 aa16.14■□□□□ 0.18
SMG9-201ENST00000270066 KIF6Q6ZMV9 814 aa16.14■□□□□ 0.18
SMG9-201ENST00000270066 TPM2P07951 284 aa16.14■□□□□ 0.17
SMG9-201ENST00000270066 CCDC141Q6ZP82 1450 aa16.14■□□□□ 0.17
SMG9-201ENST00000270066 NINLQ9Y2I6 1382 aa16.14■□□□□ 0.17
SMG9-201ENST00000270066 CDK13Q14004 1512 aaKnown RBP16.13■□□□□ 0.17
SMG9-201ENST00000270066 NEUROD6Q96NK8 337 aa16.13■□□□□ 0.17
SMG9-201ENST00000270066 CEP89Q96ST8 783 aa16.13■□□□□ 0.17
SMG9-201ENST00000270066 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
SMG9-201ENST00000270066 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
SMG9-201ENST00000270066 NFXL1Q6ZNB6 911 aa16.13■□□□□ 0.17
SMG9-201ENST00000270066 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
SMG9-201ENST00000270066 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
SMG9-201ENST00000270066 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
SMG9-201ENST00000270066 CCDC47Q96A33 483 aaKnown RBP16.12■□□□□ 0.17
SMG9-201ENST00000270066 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
SMG9-201ENST00000270066 GOLGA6L19H0YKK7 550 aa16.11■□□□□ 0.17
SMG9-201ENST00000270066 IL27Q8NEV9 243 aa16.11■□□□□ 0.17
SMG9-201ENST00000270066 TSR1Q2NL82 804 aaKnown RBP16.11■□□□□ 0.17
SMG9-201ENST00000270066 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
SMG9-201ENST00000270066 KIF14Q15058 1648 aa16.11■□□□□ 0.17
SMG9-201ENST00000270066 PES1O00541 588 aaKnown RBP16.1■□□□□ 0.17
SMG9-201ENST00000270066 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
SMG9-201ENST00000270066 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
SMG9-201ENST00000270066 SPG7Q9UQ90 795 aa16.1■□□□□ 0.17
SMG9-201ENST00000270066 CD109Q6YHK3 1445 aa16.1■□□□□ 0.17
SMG9-201ENST00000270066 PANK1Q8TE04 598 aa16.1■□□□□ 0.17
SMG9-201ENST00000270066 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
SMG9-201ENST00000270066 BECN2A8MW95 431 aa16.09■□□□□ 0.17
SMG9-201ENST00000270066 TPM1P09493 284 aa16.09■□□□□ 0.17
SMG9-201ENST00000270066 RALYLQ86SE5 291 aaKnown RBP16.09■□□□□ 0.17
SMG9-201ENST00000270066 WASHC4Q2M389 1173 aa16.09■□□□□ 0.17
SMG9-201ENST00000270066 TWISTNBQ3B726 338 aaPredicted RBP16.09■□□□□ 0.17
SMG9-201ENST00000270066 CDC45O75419 566 aa16.09■□□□□ 0.17
SMG9-201ENST00000270066 HOOK1Q9UJC3 728 aaKnown RBP16.09■□□□□ 0.17
SMG9-201ENST00000270066 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
SMG9-201ENST00000270066 CNTROBQ8N137 903 aa16.08■□□□□ 0.17
SMG9-201ENST00000270066 CLASRPQ8N2M8 674 aaKnown RBP16.08■□□□□ 0.16
SMG9-201ENST00000270066 GRIN2AQ12879 1464 aa16.08■□□□□ 0.16
SMG9-201ENST00000270066 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
SMG9-201ENST00000270066 ERC1Q8IUD2 1116 aa16.07■□□□□ 0.16
SMG9-201ENST00000270066 CABP4P57796 275 aa16.07■□□□□ 0.16
SMG9-201ENST00000270066 SULT6B1Q6IMI4 303 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms