RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
ZIM3-201ENST00000269834 PCDHB13Q9Y5F0 798 aa10.41□□□□□ -0.74
ZIM3-201ENST00000269834 RBM47A0AV96 593 aaKnown RBP10.41□□□□□ -0.74
ZIM3-201ENST00000269834 MNX1P50219 401 aaPredicted RBP10.41□□□□□ -0.74
ZIM3-201ENST00000269834 PHF8Q9UPP1 1060 aa10.41□□□□□ -0.74
ZIM3-201ENST00000269834 ABCC5O15440 1437 aa10.4□□□□□ -0.74
ZIM3-201ENST00000269834 CAMK2BQ13554 666 aa10.4□□□□□ -0.74
ZIM3-201ENST00000269834 MFSD10Q14728 455 aa10.4□□□□□ -0.74
ZIM3-201ENST00000269834 SIRT1Q96EB6 747 aa10.4□□□□□ -0.74
ZIM3-201ENST00000269834 PRKRIP1Q9H875 184 aaPredicted RBP10.4□□□□□ -0.74
ZIM3-201ENST00000269834 RRP7BPQ9NSQ0 103 aa10.4□□□□□ -0.74
ZIM3-201ENST00000269834 ADGRL2O95490 1459 aa10.4□□□□□ -0.74
ZIM3-201ENST00000269834 NUTM2FA1L443 756 aa10.4□□□□□ -0.74
ZIM3-201ENST00000269834 SH3D19Q5HYK7 790 aa10.39□□□□□ -0.75
ZIM3-201ENST00000269834 PSMD1Q99460 953 aa10.39□□□□□ -0.75
ZIM3-201ENST00000269834 ZNF662Q6ZS27 426 aa10.38□□□□□ -0.75
ZIM3-201ENST00000269834 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
ZIM3-201ENST00000269834 PBXIP1Q96AQ6 731 aa10.38□□□□□ -0.75
ZIM3-201ENST00000269834 KDM5CP41229 1560 aa10.38□□□□□ -0.75
ZIM3-201ENST00000269834 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
ZIM3-201ENST00000269834 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.38□□□□□ -0.75
ZIM3-201ENST00000269834 PZPP20742 1482 aa10.38□□□□□ -0.75
ZIM3-201ENST00000269834 NUP153P49790 1475 aaKnown RBP10.38□□□□□ -0.75
ZIM3-201ENST00000269834 DISP1Q96F81 1524 aa10.38□□□□□ -0.75
ZIM3-201ENST00000269834 KIAA0586Q9BVV6 1533 aa10.38□□□□□ -0.75
ZIM3-201ENST00000269834 PATL2C9JE40 543 aaKnown RBP10.37□□□□□ -0.75
ZIM3-201ENST00000269834 SMG6Q86US8 1419 aaKnown RBP10.37□□□□□ -0.75
ZIM3-201ENST00000269834 BCORL1Q5H9F3 1711 aa10.36□□□□□ -0.75
ZIM3-201ENST00000269834 CAMSAP2Q08AD1 1489 aa10.36□□□□□ -0.75
ZIM3-201ENST00000269834 GRIN2AQ12879 1464 aa10.36□□□□□ -0.75
ZIM3-201ENST00000269834 NOM1Q5C9Z4 860 aaKnown RBP10.36□□□□□ -0.75
ZIM3-201ENST00000269834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.75
ZIM3-201ENST00000269834 ARHGEF12Q9NZN5 1544 aa10.36□□□□□ -0.75
ZIM3-201ENST00000269834 E9PCH4 1651 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 SPDYE5A6NIY4 337 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 ABL2P42684 1182 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 PRDM16Q9HAZ2 1276 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 CHIC2Q9UKJ5 165 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 KIF7Q2M1P5 1343 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 KDM5DQ9BY66 1539 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 CSB-PGBD3P0DP91 1061 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 PDE4AP27815 886 aa10.35□□□□□ -0.75
ZIM3-201ENST00000269834 TBC1D12O60347 775 aa10.34□□□□□ -0.75
ZIM3-201ENST00000269834 GIMAP6Q6P9H5 292 aa10.34□□□□□ -0.75
ZIM3-201ENST00000269834 ZNF467Q7Z7K2 595 aaPredicted RBP10.34□□□□□ -0.75
ZIM3-201ENST00000269834 ADAMTS19Q8TE59 1207 aa10.34□□□□□ -0.75
ZIM3-201ENST00000269834 DRC1Q96MC2 740 aa10.34□□□□□ -0.75
ZIM3-201ENST00000269834 CLASP1Q7Z460 1538 aa10.34□□□□□ -0.75
ZIM3-201ENST00000269834 C11orf95C9JLR9 678 aaPredicted RBP10.34□□□□□ -0.75
ZIM3-201ENST00000269834 TCF3P15923 654 aa10.34□□□□□ -0.75
ZIM3-201ENST00000269834 MRS2Q9HD23 443 aa10.34□□□□□ -0.75
ZIM3-201ENST00000269834 TROQ12816 1431 aaPredicted RBP10.33□□□□□ -0.76
ZIM3-201ENST00000269834 UHRF1BP1Q6BDS2 1440 aa10.33□□□□□ -0.76
ZIM3-201ENST00000269834 KIAA1107Q9UPP5 1409 aa10.33□□□□□ -0.76
ZIM3-201ENST00000269834 SHANK2Q9UPX8 1470 aa10.33□□□□□ -0.76
ZIM3-201ENST00000269834 DHX29Q7Z478 1369 aaKnown RBP10.33□□□□□ -0.76
ZIM3-201ENST00000269834 RALGAPBQ86X10 1494 aa10.33□□□□□ -0.76
ZIM3-201ENST00000269834 NBPF8Q3BBV2 869 aa10.33□□□□□ -0.76
ZIM3-201ENST00000269834 CDCA8Q53HL2 280 aa10.33□□□□□ -0.76
ZIM3-201ENST00000269834 USTQ9Y2C2 406 aa10.33□□□□□ -0.76
ZIM3-201ENST00000269834 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
ZIM3-201ENST00000269834 ANKRD62A6NC57 917 aa10.32□□□□□ -0.76
ZIM3-201ENST00000269834 ZNF16P17020 682 aaPredicted RBP10.32□□□□□ -0.76
ZIM3-201ENST00000269834 CCDC184Q52MB2 194 aa10.32□□□□□ -0.76
ZIM3-201ENST00000269834 CFAP70Q5T0N1 1121 aa10.32□□□□□ -0.76
ZIM3-201ENST00000269834 EMILIN3Q9NT22 766 aa10.32□□□□□ -0.76
ZIM3-201ENST00000269834 CDC42BPAQ5VT25 1732 aa10.32□□□□□ -0.76
ZIM3-201ENST00000269834 NUP160Q12769 1436 aa10.32□□□□□ -0.76
ZIM3-201ENST00000269834 RNF123Q5XPI4 1314 aa10.32□□□□□ -0.76
ZIM3-201ENST00000269834 SRPK2P78362 688 aaKnown RBP10.31□□□□□ -0.76
ZIM3-201ENST00000269834 SREK1Q8WXA9 508 aaKnown RBP10.31□□□□□ -0.76
ZIM3-201ENST00000269834 CHD1O14646 1710 aa10.31□□□□□ -0.76
ZIM3-201ENST00000269834 GRXCR2A6NFK2 248 aa10.31□□□□□ -0.76
ZIM3-201ENST00000269834 PDAP1Q13442 181 aaKnown RBP10.31□□□□□ -0.76
ZIM3-201ENST00000269834 NOL8Q76FK4 1167 aaKnown RBP10.31□□□□□ -0.76
ZIM3-201ENST00000269834 MTMR14Q8NCE2 650 aa10.31□□□□□ -0.76
ZIM3-201ENST00000269834 CERKQ8TCT0 537 aa10.3□□□□□ -0.76
ZIM3-201ENST00000269834 IQSEC2Q5JU85 1478 aa10.3□□□□□ -0.76
ZIM3-201ENST00000269834 GNPATO15228 680 aa10.3□□□□□ -0.76
ZIM3-201ENST00000269834 TICAM2Q86XR7 235 aa10.3□□□□□ -0.76
ZIM3-201ENST00000269834 ANKRD13AQ8IZ07 590 aa10.3□□□□□ -0.76
ZIM3-201ENST00000269834 KTN1Q86UP2 1357 aaKnown RBP10.3□□□□□ -0.76
ZIM3-201ENST00000269834 CEP170Q5SW79 1584 aa10.29□□□□□ -0.76
ZIM3-201ENST00000269834 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
ZIM3-201ENST00000269834 TBC1D2BQ9UPU7 963 aa10.29□□□□□ -0.76
ZIM3-201ENST00000269834 GPATCH8Q9UKJ3 1502 aaKnown RBP10.29□□□□□ -0.76
ZIM3-201ENST00000269834 MARCH6O60337 910 aa10.29□□□□□ -0.76
ZIM3-201ENST00000269834 USP47Q96K76 1375 aa10.29□□□□□ -0.76
ZIM3-201ENST00000269834 FAM9BQ8IZU0 186 aa10.28□□□□□ -0.76
ZIM3-201ENST00000269834 CHMP7Q8WUX9 453 aaPredicted RBP10.28□□□□□ -0.76
ZIM3-201ENST00000269834 VRTNQ9H8Y1 702 aa10.28□□□□□ -0.76
ZIM3-201ENST00000269834 TMEM88BA6NKF7 163 aa10.28□□□□□ -0.76
ZIM3-201ENST00000269834 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.28□□□□□ -0.76
ZIM3-201ENST00000269834 FOSBP53539 338 aa10.27□□□□□ -0.76
ZIM3-201ENST00000269834 DNAJC14Q6Y2X3 702 aaPredicted RBP10.27□□□□□ -0.76
ZIM3-201ENST00000269834 A0A0U1RQG5 324 aaPredicted RBP10.27□□□□□ -0.77
ZIM3-201ENST00000269834 CREBZFQ9NS37 354 aa10.27□□□□□ -0.77
ZIM3-201ENST00000269834 NUDCQ9Y266 331 aa10.27□□□□□ -0.77
ZIM3-201ENST00000269834 LAMC1P11047 1609 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms