RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 CEBPAP49715 358 aaPredicted RBP30.95■■■□□ 2.55
RAB40B-201ENST00000269347 TNNT2P45379 298 aaPredicted RBP30.94■■■□□ 2.54
RAB40B-201ENST00000269347 WAPLQ7Z5K2 1190 aa30.94■■■□□ 2.54
RAB40B-201ENST00000269347 TNRQ92752 1358 aa30.93■■■□□ 2.54
RAB40B-201ENST00000269347 USP32Q8NFA0 1604 aa30.93■■■□□ 2.54
RAB40B-201ENST00000269347 UBR1Q8IWV7 1749 aa30.93■■■□□ 2.54
RAB40B-201ENST00000269347 METP08581 1390 aa30.92■■■□□ 2.54
RAB40B-201ENST00000269347 ANKRD36BQ8N2N9 1353 aa30.92■■■□□ 2.54
RAB40B-201ENST00000269347 PUS7Q96PZ0 661 aaKnown RBP30.92■■■□□ 2.54
RAB40B-201ENST00000269347 POGKQ9P215 609 aa30.92■■■□□ 2.54
RAB40B-201ENST00000269347 SRPK2P78362 688 aaKnown RBP30.9■■■□□ 2.54
RAB40B-201ENST00000269347 TSHZ2Q9NRE2 1034 aa30.9■■■□□ 2.54
RAB40B-201ENST00000269347 A0A1W2PP64 1363 aa30.9■■■□□ 2.54
RAB40B-201ENST00000269347 CD163L1Q9NR16 1453 aa30.9■■■□□ 2.54
RAB40B-201ENST00000269347 WDR43Q15061 677 aaKnown RBP eCLIP30.9■■■□□ 2.54
RAB40B-201ENST00000269347 CCDC146Q8IYE0 955 aa30.89■■■□□ 2.54
RAB40B-201ENST00000269347 SHPRHQ149N8 1683 aa30.87■■■□□ 2.53
RAB40B-201ENST00000269347 MORC1Q86VD1 984 aa30.86■■■□□ 2.53
RAB40B-201ENST00000269347 CDK19Q9BWU1 502 aa30.85■■■□□ 2.53
RAB40B-201ENST00000269347 TRHP20396 242 aaPredicted RBP30.83■■■□□ 2.53
RAB40B-201ENST00000269347 DLC1Q96QB1 1528 aa30.83■■■□□ 2.53
RAB40B-201ENST00000269347 C3P01024 1663 aa30.82■■■□□ 2.52
RAB40B-201ENST00000269347 B4GALNT3Q6L9W6 998 aa30.81■■■□□ 2.52
RAB40B-201ENST00000269347 PLPPR3Q6T4P5 718 aa30.81■■■□□ 2.52
RAB40B-201ENST00000269347 PPP4R2Q9NY27 417 aa30.81■■■□□ 2.52
RAB40B-201ENST00000269347 CGNL1Q0VF96 1302 aa30.81■■■□□ 2.52
RAB40B-201ENST00000269347 PDE3BQ13370 1112 aa30.81■■■□□ 2.52
RAB40B-201ENST00000269347 POLR3AO14802 1390 aaPredicted RBP30.8■■■□□ 2.52
RAB40B-201ENST00000269347 TMEM2Q9UHN6 1383 aa30.8■■■□□ 2.52
RAB40B-201ENST00000269347 ZNF521Q96K83 1311 aa30.8■■■□□ 2.52
RAB40B-201ENST00000269347 ERICH6BQ5W0A0 696 aa30.79■■■□□ 2.52
RAB40B-201ENST00000269347 ABCC11Q96J66 1382 aa30.79■■■□□ 2.52
RAB40B-201ENST00000269347 LTKP29376 864 aa30.78■■■□□ 2.52
RAB40B-201ENST00000269347 TXNDC2Q86VQ3 553 aa30.78■■■□□ 2.52
RAB40B-201ENST00000269347 ATAD2Q6PL18 1390 aa30.76■■■□□ 2.51
RAB40B-201ENST00000269347 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.76■■■□□ 2.51
RAB40B-201ENST00000269347 NLRP1Q9C000 1473 aa30.76■■■□□ 2.51
RAB40B-201ENST00000269347 APAF1O14727 1248 aa30.75■■■□□ 2.51
RAB40B-201ENST00000269347 MTHFSP49914 203 aa30.75■■■□□ 2.51
RAB40B-201ENST00000269347 CABP1Q9NZU7 370 aa30.75■■■□□ 2.51
RAB40B-201ENST00000269347 RCAN3Q9UKA8 241 aa30.75■■■□□ 2.51
RAB40B-201ENST00000269347 FER1L4A9Z1Z3 1794 aa30.75■■■□□ 2.51
RAB40B-201ENST00000269347 GGNBP2Q9H3C7 697 aa30.75■■■□□ 2.51
RAB40B-201ENST00000269347 ADAMTS13Q76LX8 1427 aa30.74■■■□□ 2.51
RAB40B-201ENST00000269347 SPINK5Q9NQ38 1064 aaPredicted RBP30.72■■■□□ 2.51
RAB40B-201ENST00000269347 DMRT2Q9Y5R5 561 aa30.72■■■□□ 2.51
RAB40B-201ENST00000269347 NINLQ9Y2I6 1382 aa30.71■■■□□ 2.51
RAB40B-201ENST00000269347 RRP1P56182 461 aaKnown RBP30.71■■■□□ 2.51
RAB40B-201ENST00000269347 FYB1O15117 783 aa30.71■■■□□ 2.51
RAB40B-201ENST00000269347 KNDC1Q76NI1 1749 aa30.7■■■□□ 2.5
RAB40B-201ENST00000269347 NCKAP5LQ9HCH0 1330 aa30.7■■■□□ 2.5
RAB40B-201ENST00000269347 DUSP27Q5VZP5 1158 aa30.68■■■□□ 2.5
RAB40B-201ENST00000269347 NSD2O96028 1365 aa30.67■■■□□ 2.5
RAB40B-201ENST00000269347 ANKRD26Q9UPS8 1709 aa30.67■■■□□ 2.5
RAB40B-201ENST00000269347 ROBO2Q9HCK4 1378 aa30.65■■■□□ 2.5
RAB40B-201ENST00000269347 TECPR2O15040 1411 aa30.65■■■□□ 2.5
RAB40B-201ENST00000269347 PLIN1O60240 522 aa30.65■■■□□ 2.5
RAB40B-201ENST00000269347 CPS1P31327 1500 aa30.64■■■□□ 2.5
RAB40B-201ENST00000269347 TERF2IPQ9NYB0 399 aa30.64■■■□□ 2.49
RAB40B-201ENST00000269347 WASLO00401 505 aaPredicted RBP30.62■■■□□ 2.49
RAB40B-201ENST00000269347 KIF20BQ96Q89 1820 aa30.62■■■□□ 2.49
RAB40B-201ENST00000269347 FBLN1P23142 703 aa30.62■■■□□ 2.49
RAB40B-201ENST00000269347 SLC26A8Q96RN1 970 aa30.61■■■□□ 2.49
RAB40B-201ENST00000269347 PTPRUQ92729 1446 aa30.6■■■□□ 2.49
RAB40B-201ENST00000269347 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.6■■■□□ 2.49
RAB40B-201ENST00000269347 GOLGA2Q08379 1002 aa30.59■■■□□ 2.49
RAB40B-201ENST00000269347 SLFN5Q08AF3 891 aa30.59■■■□□ 2.49
RAB40B-201ENST00000269347 EXOC6Q8TAG9 804 aa30.59■■■□□ 2.49
RAB40B-201ENST00000269347 PLEKHG1Q9ULL1 1385 aa30.59■■■□□ 2.49
RAB40B-201ENST00000269347 MED14O60244 1454 aa30.59■■■□□ 2.49
RAB40B-201ENST00000269347 FAM135BQ49AJ0 1406 aa30.58■■■□□ 2.49
RAB40B-201ENST00000269347 HDGFP51858 240 aaKnown RBP30.58■■■□□ 2.49
RAB40B-201ENST00000269347 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.58■■■□□ 2.49
RAB40B-201ENST00000269347 TRMT2AQ8IZ69 625 aaKnown RBP30.58■■■□□ 2.49
RAB40B-201ENST00000269347 RRP7AQ9Y3A4 280 aaKnown RBP30.58■■■□□ 2.49
RAB40B-201ENST00000269347 COL3A1P02461 1466 aaPredicted RBP30.58■■■□□ 2.49
RAB40B-201ENST00000269347 IQSEC2Q5JU85 1478 aa30.57■■■□□ 2.48
RAB40B-201ENST00000269347 HDGFL2Q7Z4V5 671 aaPredicted RBP30.56■■■□□ 2.48
RAB40B-201ENST00000269347 PRR36Q9H6K5 1346 aa30.56■■■□□ 2.48
RAB40B-201ENST00000269347 ARHGAP23Q9P227 1491 aa30.56■■■□□ 2.48
RAB40B-201ENST00000269347 PPIP5K1Q6PFW1 1433 aa30.56■■■□□ 2.48
RAB40B-201ENST00000269347 ATP7BP35670 1465 aa30.55■■■□□ 2.48
RAB40B-201ENST00000269347 SLIT1O75093 1534 aa30.55■■■□□ 2.48
RAB40B-201ENST00000269347 CPSF1Q10570 1443 aaKnown RBP30.54■■■□□ 2.48
RAB40B-201ENST00000269347 NUDT16Q96DE0 195 aaKnown RBP30.53■■■□□ 2.48
RAB40B-201ENST00000269347 NEUROD2Q15784 382 aa30.52■■■□□ 2.48
RAB40B-201ENST00000269347 SIRT1Q96EB6 747 aa30.52■■■□□ 2.48
RAB40B-201ENST00000269347 ZRANB1Q9UGI0 708 aa30.52■■■□□ 2.48
RAB40B-201ENST00000269347 C20orf194Q5TEA3 1177 aa30.51■■■□□ 2.48
RAB40B-201ENST00000269347 WWC1Q8IX03 1113 aa30.51■■■□□ 2.47
RAB40B-201ENST00000269347 TCP11L2Q8N4U5 519 aa30.5■■■□□ 2.47
RAB40B-201ENST00000269347 RUNDC1Q96C34 613 aa30.49■■■□□ 2.47
RAB40B-201ENST00000269347 CFAP53Q96M91 514 aa30.48■■■□□ 2.47
RAB40B-201ENST00000269347 RIMS1Q86UR5 1692 aaKnown RBP30.47■■■□□ 2.47
RAB40B-201ENST00000269347 CDC42BPGQ6DT37 1551 aa30.47■■■□□ 2.47
RAB40B-201ENST00000269347 NME9Q86XW9 330 aa30.47■■■□□ 2.47
RAB40B-201ENST00000269347 U2AF1L5P0DN76 240 aaPredicted RBP30.46■■■□□ 2.47
RAB40B-201ENST00000269347 U2AF1Q01081 240 aaKnown RBP eCLIP30.46■■■□□ 2.47
RAB40B-201ENST00000269347 CCDC136Q96JN2 1154 aa30.46■■■□□ 2.47
RAB40B-201ENST00000269347 MON2Q7Z3U7 1717 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms