RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PLEKHG1Q9ULL1 1385 aa15.69■□□□□ 0.1
SCAF11-201ENST00000266589 CEP170BQ9Y4F5 1589 aaPredicted RBP15.68■□□□□ 0.1
SCAF11-201ENST00000266589 TXNDC2Q86VQ3 553 aa15.67■□□□□ 0.1
SCAF11-201ENST00000266589 NPC1L1Q9UHC9 1359 aa15.67■□□□□ 0.1
SCAF11-201ENST00000266589 ADAMTS13Q76LX8 1427 aa15.67■□□□□ 0.1
SCAF11-201ENST00000266589 CABP2Q9NPB3 220 aa15.67■□□□□ 0.1
SCAF11-201ENST00000266589 EID1Q9Y6B2 187 aa15.67■□□□□ 0.1
SCAF11-201ENST00000266589 CARD14Q9BXL6 1004 aa15.66■□□□□ 0.1
SCAF11-201ENST00000266589 SLC12A5Q9H2X9 1139 aa15.66■□□□□ 0.1
SCAF11-201ENST00000266589 THEMISQ8N1K5 641 aaPredicted RBP15.66■□□□□ 0.1
SCAF11-201ENST00000266589 PNISRQ8TF01 805 aaKnown RBP15.66■□□□□ 0.1
SCAF11-201ENST00000266589 CPS1P31327 1500 aa15.65■□□□□ 0.1
SCAF11-201ENST00000266589 PLEKHH1Q9ULM0 1364 aa15.65■□□□□ 0.1
SCAF11-201ENST00000266589 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
SCAF11-201ENST00000266589 TECPR2O15040 1411 aa15.65■□□□□ 0.1
SCAF11-201ENST00000266589 ZNF142P52746 1687 aaPredicted RBP15.65■□□□□ 0.1
SCAF11-201ENST00000266589 WAPLQ7Z5K2 1190 aa15.64■□□□□ 0.09
SCAF11-201ENST00000266589 NSD3Q9BZ95 1437 aa15.64■□□□□ 0.09
SCAF11-201ENST00000266589 USP32Q8NFA0 1604 aa15.63■□□□□ 0.09
SCAF11-201ENST00000266589 ATAD2Q6PL18 1390 aa15.63■□□□□ 0.09
SCAF11-201ENST00000266589 MED14O60244 1454 aa15.63■□□□□ 0.09
SCAF11-201ENST00000266589 FAM135BQ49AJ0 1406 aa15.62■□□□□ 0.09
SCAF11-201ENST00000266589 ANKRD36BQ8N2N9 1353 aa15.62■□□□□ 0.09
SCAF11-201ENST00000266589 NINLQ9Y2I6 1382 aa15.62■□□□□ 0.09
SCAF11-201ENST00000266589 CDK19Q9BWU1 502 aa15.61■□□□□ 0.09
SCAF11-201ENST00000266589 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
SCAF11-201ENST00000266589 PPP2R1AP30153 589 aa15.6■□□□□ 0.09
SCAF11-201ENST00000266589 SIRT1Q96EB6 747 aa15.59■□□□□ 0.09
SCAF11-201ENST00000266589 SLC26A8Q96RN1 970 aa15.59■□□□□ 0.09
SCAF11-201ENST00000266589 ZBED9Q6R2W3 1325 aa15.59■□□□□ 0.09
SCAF11-201ENST00000266589 A0A1W2PP64 1363 aa15.58■□□□□ 0.08
SCAF11-201ENST00000266589 ROBO2Q9HCK4 1378 aa15.58■□□□□ 0.08
SCAF11-201ENST00000266589 SETD1BQ9UPS6 1966 aaKnown RBP15.57■□□□□ 0.08
SCAF11-201ENST00000266589 PTPRUQ92729 1446 aa15.57■□□□□ 0.08
SCAF11-201ENST00000266589 CD163L1Q9NR16 1453 aa15.56■□□□□ 0.08
SCAF11-201ENST00000266589 CGNL1Q0VF96 1302 aa15.56■□□□□ 0.08
SCAF11-201ENST00000266589 TBX22Q9Y458 520 aa15.56■□□□□ 0.08
SCAF11-201ENST00000266589 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-201ENST00000266589 WASLO00401 505 aaPredicted RBP15.55■□□□□ 0.08
SCAF11-201ENST00000266589 TERF2IPQ9NYB0 399 aa15.55■□□□□ 0.08
SCAF11-201ENST00000266589 ADGRB2O60241 1585 aa15.54■□□□□ 0.08
SCAF11-201ENST00000266589 XRN1Q8IZH2 1706 aaKnown RBP15.53■□□□□ 0.08
SCAF11-201ENST00000266589 NSD2O96028 1365 aa15.53■□□□□ 0.08
SCAF11-201ENST00000266589 MORC1Q86VD1 984 aa15.53■□□□□ 0.08
SCAF11-201ENST00000266589 CABP1Q9NZU7 370 aa15.53■□□□□ 0.08
SCAF11-201ENST00000266589 ATP7BP35670 1465 aa15.53■□□□□ 0.08
SCAF11-201ENST00000266589 HDGFL2Q7Z4V5 671 aaPredicted RBP15.52■□□□□ 0.08
SCAF11-201ENST00000266589 AMOTL2Q9Y2J4 779 aa15.52■□□□□ 0.08
SCAF11-201ENST00000266589 PTCH1Q13635 1447 aa15.52■□□□□ 0.08
SCAF11-201ENST00000266589 ANKLE2Q86XL3 938 aa15.52■□□□□ 0.07
SCAF11-201ENST00000266589 ANKRD26Q9UPS8 1709 aa15.51■□□□□ 0.07
SCAF11-201ENST00000266589 KIF20BQ96Q89 1820 aa15.51■□□□□ 0.07
SCAF11-201ENST00000266589 BLMP54132 1417 aaPredicted RBP15.5■□□□□ 0.07
SCAF11-201ENST00000266589 PPIP5K1Q6PFW1 1433 aa15.5■□□□□ 0.07
SCAF11-201ENST00000266589 INSRP06213 1382 aa15.5■□□□□ 0.07
SCAF11-201ENST00000266589 SENP3-EIF4A1A0A087X0R7 540 aa15.49■□□□□ 0.07
SCAF11-201ENST00000266589 PIK3R4Q99570 1358 aa15.49■□□□□ 0.07
SCAF11-201ENST00000266589 TNNT2P45379 298 aaPredicted RBP15.48■□□□□ 0.07
SCAF11-201ENST00000266589 CDC42BPGQ6DT37 1551 aa15.48■□□□□ 0.07
SCAF11-201ENST00000266589 WDR43Q15061 677 aaKnown RBP eCLIP15.48■□□□□ 0.07
SCAF11-201ENST00000266589 NUDT16Q96DE0 195 aaKnown RBP15.48■□□□□ 0.07
SCAF11-201ENST00000266589 ITSN1Q15811 1721 aa15.48■□□□□ 0.07
SCAF11-201ENST00000266589 TOPAZ1Q8N9V7 1692 aa15.47■□□□□ 0.07
SCAF11-201ENST00000266589 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
SCAF11-201ENST00000266589 POLR3AO14802 1390 aaPredicted RBP15.46■□□□□ 0.07
SCAF11-201ENST00000266589 CHD2O14647 1828 aaKnown RBP15.46■□□□□ 0.07
SCAF11-201ENST00000266589 AKAP12Q02952 1782 aa15.46■□□□□ 0.07
SCAF11-201ENST00000266589 MON2Q7Z3U7 1717 aa15.46■□□□□ 0.07
SCAF11-201ENST00000266589 CCDC61Q9Y6R9 512 aa15.46■□□□□ 0.07
SCAF11-201ENST00000266589 PRR36Q9H6K5 1346 aa15.46■□□□□ 0.06
SCAF11-201ENST00000266589 CPSF1Q10570 1443 aaKnown RBP15.45■□□□□ 0.06
SCAF11-201ENST00000266589 GGNBP2Q9H3C7 697 aa15.45■□□□□ 0.06
SCAF11-201ENST00000266589 NCKAP5LQ9HCH0 1330 aa15.45■□□□□ 0.06
SCAF11-201ENST00000266589 SHPRHQ149N8 1683 aa15.44■□□□□ 0.06
SCAF11-201ENST00000266589 FYB1O15117 783 aa15.44■□□□□ 0.06
SCAF11-201ENST00000266589 KCNA6P17658 529 aa15.44■□□□□ 0.06
SCAF11-201ENST00000266589 NPHP4O75161 1426 aaPredicted RBP15.44■□□□□ 0.06
SCAF11-201ENST00000266589 EDC4Q6P2E9 1401 aaKnown RBP15.43■□□□□ 0.06
SCAF11-201ENST00000266589 SMG6Q86US8 1419 aaKnown RBP15.42■□□□□ 0.06
SCAF11-201ENST00000266589 MTHFSP49914 203 aa15.42■□□□□ 0.06
SCAF11-201ENST00000266589 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.42■□□□□ 0.066e-6■■□□□ 14.4
SCAF11-201ENST00000266589 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
SCAF11-201ENST00000266589 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
SCAF11-201ENST00000266589 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
SCAF11-201ENST00000266589 NRKQ7Z2Y5 1582 aa15.4■□□□□ 0.06
SCAF11-201ENST00000266589 RGPD8O14715 1765 aaPredicted RBP15.4■□□□□ 0.06
SCAF11-201ENST00000266589 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
SCAF11-201ENST00000266589 SUPT16HQ9Y5B9 1047 aaKnown RBP15.39■□□□□ 0.05
SCAF11-201ENST00000266589 NALCNQ8IZF0 1738 aa15.39■□□□□ 0.05
SCAF11-201ENST00000266589 NEFLP07196 543 aa15.39■□□□□ 0.05
SCAF11-201ENST00000266589 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
SCAF11-201ENST00000266589 FMN2Q9NZ56 1722 aa15.38■□□□□ 0.05
SCAF11-201ENST00000266589 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
SCAF11-201ENST00000266589 PLEKHG3A1L390 1219 aa15.37■□□□□ 0.05
SCAF11-201ENST00000266589 FKBP8Q14318 412 aa15.36■□□□□ 0.05
SCAF11-201ENST00000266589 CCDC146Q8IYE0 955 aa15.36■□□□□ 0.05
SCAF11-201ENST00000266589 ACEP12821 1306 aa15.36■□□□□ 0.05
SCAF11-201ENST00000266589 NME9Q86XW9 330 aa15.36■□□□□ 0.05
SCAF11-201ENST00000266589 NWD1Q149M9 1564 aa15.35■□□□□ 0.05
SCAF11-201ENST00000266589 ANKARQ7Z5J8 1434 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms