RNA–Protein interactions for RNA: ENST00000265140.9

SLF1-201, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLF1, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-201ENST00000265140 CHMP3Q9Y3E7 222 aa8.22□□□□□ -1.09
SLF1-201ENST00000265140 DDX49Q9Y6V7 483 aaKnown RBP8.22□□□□□ -1.09
SLF1-201ENST00000265140 PRG4Q92954 1404 aaPredicted RBP8.22□□□□□ -1.09
SLF1-201ENST00000265140 TRIM6-TRIM34B2RNG4 842 aa8.22□□□□□ -1.09
SLF1-201ENST00000265140 LNPKQ9C0E8 428 aa8.22□□□□□ -1.09
SLF1-201ENST00000265140 SLC12A5Q9H2X9 1139 aa8.22□□□□□ -1.09
SLF1-201ENST00000265140 H3BQV1 296 aa8.21□□□□□ -1.09
SLF1-201ENST00000265140 IFFO2Q5TF58 517 aa8.21□□□□□ -1.09
SLF1-201ENST00000265140 GGNBP2Q9H3C7 697 aa8.21□□□□□ -1.09
SLF1-201ENST00000265140 DDX11L8A8MPP1 907 aa8.21□□□□□ -1.09
SLF1-201ENST00000265140 HSP90B2PQ58FF3 399 aa8.21□□□□□ -1.09
SLF1-201ENST00000265140 ARGLU1Q9NWB6 273 aaPredicted RBP8.21□□□□□ -1.09
SLF1-201ENST00000265140 SMG6Q86US8 1419 aaKnown RBP8.21□□□□□ -1.1
SLF1-201ENST00000265140 AKAP17AQ02040 695 aaKnown RBP8.21□□□□□ -1.1
SLF1-201ENST00000265140 PAF1Q8N7H5 531 aa8.21□□□□□ -1.1
SLF1-201ENST00000265140 TOPBP1Q92547 1522 aa8.21□□□□□ -1.1
SLF1-201ENST00000265140 NESP48681 1621 aa8.21□□□□□ -1.1
SLF1-201ENST00000265140 LAMC3Q9Y6N6 1575 aa8.21□□□□□ -1.1
SLF1-201ENST00000265140 AMPHP49418 695 aa8.21□□□□□ -1.1
SLF1-201ENST00000265140 NAP1L1P55209 391 aaKnown RBP8.21□□□□□ -1.1
SLF1-201ENST00000265140 API5Q9BZZ5 524 aaKnown RBP8.21□□□□□ -1.1
SLF1-201ENST00000265140 CCDC173Q0VFZ6 552 aa8.2□□□□□ -1.1
SLF1-201ENST00000265140 MYO6Q9UM54 1294 aa8.2□□□□□ -1.1
SLF1-201ENST00000265140 HOMER1Q86YM7 354 aa8.2□□□□□ -1.1
SLF1-201ENST00000265140 COG3Q96JB2 828 aa8.2□□□□□ -1.1
SLF1-201ENST00000265140 FRAT2O75474 233 aaPredicted RBP8.2□□□□□ -1.1
SLF1-201ENST00000265140 CUL7Q14999 1698 aa8.2□□□□□ -1.1
SLF1-201ENST00000265140 NOL8Q76FK4 1167 aaKnown RBP8.2□□□□□ -1.1
SLF1-201ENST00000265140 CHMP4CQ96CF2 233 aa8.2□□□□□ -1.1
SLF1-201ENST00000265140 BCAR3O75815 825 aa8.19□□□□□ -1.1
SLF1-201ENST00000265140 C22orf23Q9BZE7 217 aa8.19□□□□□ -1.1
SLF1-201ENST00000265140 MAP3K1Q13233 1512 aa8.19□□□□□ -1.1
SLF1-201ENST00000265140 CWC22Q9HCG8 908 aaKnown RBP8.19□□□□□ -1.1
SLF1-201ENST00000265140 ROCK1Q13464 1354 aa8.19□□□□□ -1.1
SLF1-201ENST00000265140 MSH5O43196 834 aa8.19□□□□□ -1.1
SLF1-201ENST00000265140 ZFYVE27Q5T4F4 411 aa8.19□□□□□ -1.1
SLF1-201ENST00000265140 CCDC43Q96MW1 224 aaKnown RBP8.18□□□□□ -1.1
SLF1-201ENST00000265140 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
SLF1-201ENST00000265140 SKOR2Q2VWA4 1001 aaPredicted RBP8.18□□□□□ -1.1
SLF1-201ENST00000265140 DYDC1Q8WWB3 177 aa8.18□□□□□ -1.1
SLF1-201ENST00000265140 R3HCC1Q9Y3T6 440 aaKnown RBP8.18□□□□□ -1.1
SLF1-201ENST00000265140 C9orf84Q5VXU9 1444 aa8.18□□□□□ -1.1
SLF1-201ENST00000265140 REC8O95072 547 aa8.18□□□□□ -1.1
SLF1-201ENST00000265140 ANKRD18AQ8IVF6 992 aa8.18□□□□□ -1.1
SLF1-201ENST00000265140 INCENPQ9NQS7 918 aa8.18□□□□□ -1.1
SLF1-201ENST00000265140 FAM184AQ8NB25 1140 aa8.18□□□□□ -1.1
SLF1-201ENST00000265140 ERCC4Q92889 916 aaPredicted RBP8.18□□□□□ -1.1
SLF1-201ENST00000265140 LTV1Q96GA3 475 aaPredicted RBP8.18□□□□□ -1.1
SLF1-201ENST00000265140 ABCA10Q8WWZ4 1543 aa8.17□□□□□ -1.1
SLF1-201ENST00000265140 GNAI1P63096 354 aa8.17□□□□□ -1.1
SLF1-201ENST00000265140 BCCIPQ9P287 314 aaKnown RBP eCLIP8.17□□□□□ -1.1
SLF1-201ENST00000265140 MNS1Q8NEH6 495 aa8.17□□□□□ -1.1
SLF1-201ENST00000265140 TSPYL1Q9H0U9 437 aa8.17□□□□□ -1.1
SLF1-201ENST00000265140 EID1Q9Y6B2 187 aa8.17□□□□□ -1.1
SLF1-201ENST00000265140 DAPK1P53355 1430 aa8.17□□□□□ -1.1
SLF1-201ENST00000265140 SYNE3Q6ZMZ3 975 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 HOOK1Q9UJC3 728 aaKnown RBP8.16□□□□□ -1.1
SLF1-201ENST00000265140 EXOSC9Q06265 439 aaKnown RBP8.16□□□□□ -1.1
SLF1-201ENST00000265140 CABP2Q9NPB3 220 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 PDZRN3Q9UPQ7 1066 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 GOLGA6L7A0A1B0GV03 622 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 ANKRD62A6NC57 917 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 RAD21O60216 631 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
SLF1-201ENST00000265140 AMOTL1Q8IY63 956 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 FOXD4L4Q8WXT5 416 aaPredicted RBP8.16□□□□□ -1.1
SLF1-201ENST00000265140 EHBP1L1Q8N3D4 1523 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 HMOX1P09601 288 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 ATP6V1DQ9Y5K8 247 aa8.16□□□□□ -1.1
SLF1-201ENST00000265140 EPRSP07814 1512 aaKnown RBP8.15□□□□□ -1.1
SLF1-201ENST00000265140 NCOA1Q15788 1441 aa8.15□□□□□ -1.1
SLF1-201ENST00000265140 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
SLF1-201ENST00000265140 RILPL2Q969X0 211 aa8.15□□□□□ -1.1
SLF1-201ENST00000265140 CAGE1Q8TC20 777 aa8.15□□□□□ -1.1
SLF1-201ENST00000265140 DNAJC5BQ9UF47 199 aa8.15□□□□□ -1.1
SLF1-201ENST00000265140 CCDC66A2RUB6 948 aa8.15□□□□□ -1.11
SLF1-201ENST00000265140 TRIM29Q14134 588 aa8.15□□□□□ -1.11
SLF1-201ENST00000265140 FAM13BQ9NYF5 915 aa8.15□□□□□ -1.11
SLF1-201ENST00000265140 SKIDA1Q1XH10 827 aa8.14□□□□□ -1.11
SLF1-201ENST00000265140 CCDC97Q96F63 343 aaPredicted RBP8.14□□□□□ -1.11
SLF1-201ENST00000265140 EZRP15311 586 aaKnown RBP8.14□□□□□ -1.11
SLF1-201ENST00000265140 CYB5RLQ6IPT4 315 aa8.14□□□□□ -1.11
SLF1-201ENST00000265140 SLFN5Q08AF3 891 aa8.14□□□□□ -1.11
SLF1-201ENST00000265140 CLASRPQ8N2M8 674 aaKnown RBP8.14□□□□□ -1.11
SLF1-201ENST00000265140 SYNJ2O15056 1496 aa8.14□□□□□ -1.11
SLF1-201ENST00000265140 NOL10Q9BSC4 688 aaKnown RBP8.14□□□□□ -1.11
SLF1-201ENST00000265140 OSCARQ8IYS5 282 aa8.14□□□□□ -1.11
SLF1-201ENST00000265140 TEFQ10587 303 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 SEPT7Q16181 437 aaKnown RBP8.13□□□□□ -1.11
SLF1-201ENST00000265140 WDR63Q8IWG1 891 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 CCAR1Q8IX12 1150 aaKnown RBP8.13□□□□□ -1.11
SLF1-201ENST00000265140 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 NUCB2P80303 420 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 ABCC5O15440 1437 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 PRKAR2BP31323 418 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 EPS15P42566 896 aa8.13□□□□□ -1.11
SLF1-201ENST00000265140 TSR2Q969E8 191 aaKnown RBP8.13□□□□□ -1.11
SLF1-201ENST00000265140 CCDC9Q9Y3X0 531 aaKnown RBP8.13□□□□□ -1.11
SLF1-201ENST00000265140 GTF2E1P29083 439 aaPredicted RBP8.13□□□□□ -1.11
SLF1-201ENST00000265140 FKBP5Q13451 457 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms