RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 FGD6Q6ZV73 1430 aa23.35■■□□□ 1.33
NECTIN1-201ENST00000264025 NINLQ9Y2I6 1382 aa23.35■■□□□ 1.33
NECTIN1-201ENST00000264025 CNTLNQ9NXG0 1405 aa23.35■■□□□ 1.33
NECTIN1-201ENST00000264025 FOSBP53539 338 aa23.35■■□□□ 1.33
NECTIN1-201ENST00000264025 AIMP1Q12904 312 aaKnown RBP23.35■■□□□ 1.33
NECTIN1-201ENST00000264025 PANK1Q8TE04 598 aa23.35■■□□□ 1.33
NECTIN1-201ENST00000264025 SMARCA4P51532 1647 aa23.35■■□□□ 1.33
NECTIN1-201ENST00000264025 OSCARQ8IYS5 282 aa23.34■■□□□ 1.33
NECTIN1-201ENST00000264025 ZNF771Q7L3S4 317 aaPredicted RBP23.33■■□□□ 1.33
NECTIN1-201ENST00000264025 ATF3P18847 181 aa23.33■■□□□ 1.32
NECTIN1-201ENST00000264025 NLRP2Q9NX02 1062 aa23.33■■□□□ 1.32
NECTIN1-201ENST00000264025 TEX35Q5T0J7 233 aa23.32■■□□□ 1.32
NECTIN1-201ENST00000264025 MEX3CQ5U5Q3 659 aaKnown RBP23.32■■□□□ 1.32
NECTIN1-201ENST00000264025 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.32■■□□□ 1.32
NECTIN1-201ENST00000264025 CABP2Q9NPB3 220 aa23.32■■□□□ 1.32
NECTIN1-201ENST00000264025 PSMA5P28066 241 aa23.32■■□□□ 1.32
NECTIN1-201ENST00000264025 BRMS1Q9HCU9 246 aa23.31■■□□□ 1.32
NECTIN1-201ENST00000264025 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
NECTIN1-201ENST00000264025 CNTROBQ8N137 903 aa23.31■■□□□ 1.32
NECTIN1-201ENST00000264025 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.3■■□□□ 1.32
NECTIN1-201ENST00000264025 BRD4O60885 1362 aaPredicted RBP23.3■■□□□ 1.32
NECTIN1-201ENST00000264025 IFT57Q9NWB7 429 aa23.29■■□□□ 1.32
NECTIN1-201ENST00000264025 NAT10Q9H0A0 1025 aaKnown RBP23.29■■□□□ 1.32
NECTIN1-201ENST00000264025 ZNF644Q9H582 1327 aaPredicted RBP23.29■■□□□ 1.32
NECTIN1-201ENST00000264025 XBP1P17861 261 aa23.29■■□□□ 1.32
NECTIN1-201ENST00000264025 ANKRD50Q9ULJ7 1429 aa23.28■■□□□ 1.32
NECTIN1-201ENST00000264025 GNAI3P08754 354 aa23.28■■□□□ 1.32
NECTIN1-201ENST00000264025 CCDC27Q2M243 656 aa23.28■■□□□ 1.32
NECTIN1-201ENST00000264025 OLFM4Q6UX06 510 aa23.28■■□□□ 1.32
NECTIN1-201ENST00000264025 FSD1Q9BTV5 496 aa23.28■■□□□ 1.32
NECTIN1-201ENST00000264025 NLRP6P59044 892 aa23.28■■□□□ 1.32
NECTIN1-201ENST00000264025 CLASRPQ8N2M8 674 aaKnown RBP23.27■■□□□ 1.32
NECTIN1-201ENST00000264025 MNS1Q8NEH6 495 aa23.27■■□□□ 1.32
NECTIN1-201ENST00000264025 NAP1L1P55209 391 aaKnown RBP23.27■■□□□ 1.32
NECTIN1-201ENST00000264025 FAM43AQ8N2R8 423 aa23.27■■□□□ 1.31
NECTIN1-201ENST00000264025 ARGLU1Q9NWB6 273 aaPredicted RBP23.27■■□□□ 1.31
NECTIN1-201ENST00000264025 CCDC30Q5VVM6 783 aa23.26■■□□□ 1.31
NECTIN1-201ENST00000264025 FAM13BQ9NYF5 915 aa23.26■■□□□ 1.31
NECTIN1-201ENST00000264025 FYB1O15117 783 aa23.26■■□□□ 1.31
NECTIN1-201ENST00000264025 MTHFSP49914 203 aa23.26■■□□□ 1.31
NECTIN1-201ENST00000264025 ADAMTS8Q9UP79 889 aa23.26■■□□□ 1.31
NECTIN1-201ENST00000264025 FAM69CQ0P6D2 419 aa23.26■■□□□ 1.31
NECTIN1-201ENST00000264025 RUFY1Q96T51 708 aa23.26■■□□□ 1.31
NECTIN1-201ENST00000264025 PATL2C9JE40 543 aaKnown RBP23.25■■□□□ 1.31
NECTIN1-201ENST00000264025 NUTM2GQ5VZR2 741 aa23.25■■□□□ 1.31
NECTIN1-201ENST00000264025 CDR1P51861 262 aa23.25■■□□□ 1.31
NECTIN1-201ENST00000264025 GAS2L2Q8NHY3 880 aa23.25■■□□□ 1.31
NECTIN1-201ENST00000264025 IGF1RP08069 1367 aa23.25■■□□□ 1.31
NECTIN1-201ENST00000264025 CT47A1Q5JQC4 288 aaPredicted RBP23.24■■□□□ 1.31
NECTIN1-201ENST00000264025 TMEM132EQ6IEE7 984 aa23.24■■□□□ 1.31
NECTIN1-201ENST00000264025 SDF4Q9BRK5 362 aa23.24■■□□□ 1.31
NECTIN1-201ENST00000264025 CWC22Q9HCG8 908 aaKnown RBP23.24■■□□□ 1.31
NECTIN1-201ENST00000264025 ACBD3Q9H3P7 528 aa23.24■■□□□ 1.31
NECTIN1-201ENST00000264025 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
NECTIN1-201ENST00000264025 TCP11L2Q8N4U5 519 aa23.23■■□□□ 1.31
NECTIN1-201ENST00000264025 SAMD1Q6SPF0 538 aaPredicted RBP23.23■■□□□ 1.31
NECTIN1-201ENST00000264025 TBC1D2BQ9UPU7 963 aa23.23■■□□□ 1.31
NECTIN1-201ENST00000264025 SURF6O75683 361 aaKnown RBP23.23■■□□□ 1.31
NECTIN1-201ENST00000264025 AK7Q96M32 723 aa23.23■■□□□ 1.31
NECTIN1-201ENST00000264025 SART3Q15020 963 aaKnown RBP23.23■■□□□ 1.31
NECTIN1-201ENST00000264025 RRBP1Q9P2E9 1410 aaKnown RBP23.21■■□□□ 1.31
NECTIN1-201ENST00000264025 NFKBIBQ15653 356 aa23.21■■□□□ 1.31
NECTIN1-201ENST00000264025 VSIG10Q8N0Z9 540 aa23.21■■□□□ 1.31
NECTIN1-201ENST00000264025 CCDC39Q9UFE4 941 aa23.21■■□□□ 1.31
NECTIN1-201ENST00000264025 EPS15P42566 896 aa23.2■■□□□ 1.31
NECTIN1-201ENST00000264025 MRE11P49959 708 aa23.2■■□□□ 1.31
NECTIN1-201ENST00000264025 FYCO1Q9BQS8 1478 aa23.2■■□□□ 1.3
NECTIN1-201ENST00000264025 OFD1O75665 1012 aa23.2■■□□□ 1.3
NECTIN1-201ENST00000264025 HIP1O00291 1037 aa23.2■■□□□ 1.3
NECTIN1-201ENST00000264025 GPRASP1Q5JY77 1395 aa23.2■■□□□ 1.3
NECTIN1-201ENST00000264025 ODF2Q5BJF6 829 aa23.19■■□□□ 1.3
NECTIN1-201ENST00000264025 NASPP49321 788 aaPredicted RBP23.19■■□□□ 1.3
NECTIN1-201ENST00000264025 LETM1O95202 739 aaPredicted RBP23.19■■□□□ 1.3
NECTIN1-201ENST00000264025 CNKSR2Q8WXI2 1034 aa23.19■■□□□ 1.3
NECTIN1-201ENST00000264025 PDILTQ8N807 584 aa23.18■■□□□ 1.3
NECTIN1-201ENST00000264025 MCM2P49736 904 aa23.18■■□□□ 1.3
NECTIN1-201ENST00000264025 PLEKHO1Q53GL0 409 aaPredicted RBP23.18■■□□□ 1.3
NECTIN1-201ENST00000264025 PRKAR2BP31323 418 aa23.17■■□□□ 1.3
NECTIN1-201ENST00000264025 DNAJC2Q99543 621 aaKnown RBP23.17■■□□□ 1.3
NECTIN1-201ENST00000264025 HSP90B2PQ58FF3 399 aa23.17■■□□□ 1.3
NECTIN1-201ENST00000264025 R3HCC1Q9Y3T6 440 aaKnown RBP23.17■■□□□ 1.3
NECTIN1-201ENST00000264025 MBD3O95983 291 aa23.17■■□□□ 1.3
NECTIN1-201ENST00000264025 PPP2R1AP30153 589 aa23.17■■□□□ 1.3
NECTIN1-201ENST00000264025 LRRC9Q6ZRR7 1453 aa23.16■■□□□ 1.3
NECTIN1-201ENST00000264025 PDCP20941 246 aa23.16■■□□□ 1.3
NECTIN1-201ENST00000264025 ERC1Q8IUD2 1116 aa23.16■■□□□ 1.3
NECTIN1-201ENST00000264025 ABTB2Q8N961 1025 aa23.16■■□□□ 1.3
NECTIN1-201ENST00000264025 EXOSC9Q06265 439 aaKnown RBP23.16■■□□□ 1.3
NECTIN1-201ENST00000264025 WASHC2AQ641Q2 1341 aa23.15■■□□□ 1.3
NECTIN1-201ENST00000264025 TWISTNBQ3B726 338 aaPredicted RBP23.15■■□□□ 1.3
NECTIN1-201ENST00000264025 MTMR7Q9Y216 660 aa23.15■■□□□ 1.3
NECTIN1-201ENST00000264025 PRDM2Q13029 1718 aa23.15■■□□□ 1.3
NECTIN1-201ENST00000264025 NEK4P51957 841 aa23.15■■□□□ 1.3
NECTIN1-201ENST00000264025 CCDC173Q0VFZ6 552 aa23.15■■□□□ 1.3
NECTIN1-201ENST00000264025 KIF6Q6ZMV9 814 aa23.15■■□□□ 1.3
NECTIN1-201ENST00000264025 GCC1Q96CN9 775 aa23.15■■□□□ 1.3
NECTIN1-201ENST00000264025 KINO60870 393 aaKnown RBP23.14■■□□□ 1.3
NECTIN1-201ENST00000264025 CFAP70Q5T0N1 1121 aa23.14■■□□□ 1.3
NECTIN1-201ENST00000264025 RNF214Q8ND24 703 aa23.14■■□□□ 1.3
NECTIN1-201ENST00000264025 RAD54L2Q9Y4B4 1467 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms