RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ABCC11Q96J66 1382 aa13.61□□□□□ -0.23
SNRNP40-201ENST00000263694 DISP3Q9P2K9 1392 aa13.61□□□□□ -0.23
SNRNP40-201ENST00000263694 KIF7Q2M1P5 1343 aa13.61□□□□□ -0.23
SNRNP40-201ENST00000263694 POGKQ9P215 609 aa13.61□□□□□ -0.23
SNRNP40-201ENST00000263694 DDX10Q13206 875 aaKnown RBP13.6□□□□□ -0.23
SNRNP40-201ENST00000263694 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
SNRNP40-201ENST00000263694 ROBO2Q9HCK4 1378 aa13.59□□□□□ -0.23
SNRNP40-201ENST00000263694 MINK1Q8N4C8 1332 aaPredicted RBP13.59□□□□□ -0.23
SNRNP40-201ENST00000263694 CHD2O14647 1828 aaKnown RBP13.59□□□□□ -0.23
SNRNP40-201ENST00000263694 KCNA6P17658 529 aa13.58□□□□□ -0.23
SNRNP40-201ENST00000263694 DLC1Q96QB1 1528 aa13.58□□□□□ -0.24
SNRNP40-201ENST00000263694 KNDC1Q76NI1 1749 aa13.58□□□□□ -0.24
SNRNP40-201ENST00000263694 TMF1P82094 1093 aa13.58□□□□□ -0.24
SNRNP40-201ENST00000263694 RBM33Q96EV2 1170 aaKnown RBP13.58□□□□□ -0.24
SNRNP40-201ENST00000263694 TECPR2O15040 1411 aa13.57□□□□□ -0.24
SNRNP40-201ENST00000263694 XRN1Q8IZH2 1706 aaKnown RBP13.56□□□□□ -0.24
SNRNP40-201ENST00000263694 CPS1P31327 1500 aa13.56□□□□□ -0.24
SNRNP40-201ENST00000263694 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
SNRNP40-201ENST00000263694 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.54□□□□□ -0.24
SNRNP40-201ENST00000263694 FAM135BQ49AJ0 1406 aa13.54□□□□□ -0.24
SNRNP40-201ENST00000263694 STRCP1A6NGW2 1772 aa13.54□□□□□ -0.24
SNRNP40-201ENST00000263694 DIEXFQ68CQ4 756 aaKnown RBP13.54□□□□□ -0.24
SNRNP40-201ENST00000263694 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
SNRNP40-201ENST00000263694 U3KPZ7 1027 aaPredicted RBP13.54□□□□□ -0.24
SNRNP40-201ENST00000263694 TULP4Q9NRJ4 1543 aa13.53□□□□□ -0.24
SNRNP40-201ENST00000263694 CABP2Q9NPB3 220 aa13.53□□□□□ -0.24
SNRNP40-201ENST00000263694 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
SNRNP40-201ENST00000263694 DSG3P32926 999 aa13.51□□□□□ -0.25
SNRNP40-201ENST00000263694 CDK19Q9BWU1 502 aa13.51□□□□□ -0.25
SNRNP40-201ENST00000263694 PTCH1Q13635 1447 aa13.51□□□□□ -0.25
SNRNP40-201ENST00000263694 EVC2Q86UK5 1308 aa13.51□□□□□ -0.25
SNRNP40-201ENST00000263694 CAPN15O75808 1086 aa13.49□□□□□ -0.25
SNRNP40-201ENST00000263694 SRPK2P78362 688 aaKnown RBP13.49□□□□□ -0.25
SNRNP40-201ENST00000263694 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
SNRNP40-201ENST00000263694 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
SNRNP40-201ENST00000263694 ZNF335Q9H4Z2 1342 aaPredicted RBP13.49□□□□□ -0.25
SNRNP40-201ENST00000263694 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
SNRNP40-201ENST00000263694 WASLO00401 505 aaPredicted RBP13.48□□□□□ -0.25
SNRNP40-201ENST00000263694 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
SNRNP40-201ENST00000263694 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
SNRNP40-201ENST00000263694 MYOM1P52179 1685 aa13.47□□□□□ -0.25
SNRNP40-201ENST00000263694 TMC1Q8TDI8 760 aa13.46□□□□□ -0.25
SNRNP40-201ENST00000263694 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
SNRNP40-201ENST00000263694 NALCNQ8IZF0 1738 aa13.46□□□□□ -0.26
SNRNP40-201ENST00000263694 C14orf37Q86TY3 774 aa13.45□□□□□ -0.26
SNRNP40-201ENST00000263694 PANK3Q9H999 370 aa13.45□□□□□ -0.26
SNRNP40-201ENST00000263694 CNGB1Q14028 1251 aaPredicted RBP13.45□□□□□ -0.26
SNRNP40-201ENST00000263694 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
SNRNP40-201ENST00000263694 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
SNRNP40-201ENST00000263694 ADGRB2O60241 1585 aa13.43□□□□□ -0.26
SNRNP40-201ENST00000263694 NUDT16Q96DE0 195 aaKnown RBP13.43□□□□□ -0.26
SNRNP40-201ENST00000263694 TMEM94Q12767 1356 aa13.43□□□□□ -0.26
SNRNP40-201ENST00000263694 NKTRP30414 1462 aaKnown RBP13.43□□□□□ -0.26
SNRNP40-201ENST00000263694 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
SNRNP40-201ENST00000263694 PUS7Q96PZ0 661 aaKnown RBP13.42□□□□□ -0.26
SNRNP40-201ENST00000263694 CABP1Q9NZU7 370 aa13.42□□□□□ -0.26
SNRNP40-201ENST00000263694 XIRP1Q702N8 1843 aaKnown RBP13.42□□□□□ -0.26
SNRNP40-201ENST00000263694 ADGRL3Q9HAR2 1447 aa13.41□□□□□ -0.26
SNRNP40-201ENST00000263694 MIER1Q8N108 512 aa13.41□□□□□ -0.26
SNRNP40-201ENST00000263694 USP32Q8NFA0 1604 aa13.4□□□□□ -0.26
SNRNP40-201ENST00000263694 LRRC7Q96NW7 1537 aa13.4□□□□□ -0.26
SNRNP40-201ENST00000263694 ATAD2Q6PL18 1390 aa13.4□□□□□ -0.26
SNRNP40-201ENST00000263694 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
SNRNP40-201ENST00000263694 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
SNRNP40-201ENST00000263694 FMN2Q9NZ56 1722 aa13.4□□□□□ -0.26
SNRNP40-201ENST00000263694 ATP7BP35670 1465 aa13.39□□□□□ -0.27
SNRNP40-201ENST00000263694 PPIP5K1Q6PFW1 1433 aa13.39□□□□□ -0.27
SNRNP40-201ENST00000263694 C19orf44Q9H6X5 657 aa13.38□□□□□ -0.27
SNRNP40-201ENST00000263694 CCDC61Q9Y6R9 512 aa13.38□□□□□ -0.27
SNRNP40-201ENST00000263694 CDC42BPGQ6DT37 1551 aa13.38□□□□□ -0.27
SNRNP40-201ENST00000263694 PMFBP1Q8TBY8 1022 aa13.37□□□□□ -0.27
SNRNP40-201ENST00000263694 CD163L1Q9NR16 1453 aa13.37□□□□□ -0.27
SNRNP40-201ENST00000263694 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
SNRNP40-201ENST00000263694 TOPAZ1Q8N9V7 1692 aa13.36□□□□□ -0.27
SNRNP40-201ENST00000263694 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
SNRNP40-201ENST00000263694 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
SNRNP40-201ENST00000263694 ANKRD36BQ8N2N9 1353 aa13.35□□□□□ -0.27
SNRNP40-201ENST00000263694 LTBP4Q8N2S1 1624 aa13.34□□□□□ -0.27
SNRNP40-201ENST00000263694 NSD3Q9BZ95 1437 aa13.34□□□□□ -0.27
SNRNP40-201ENST00000263694 ANP32CO43423 234 aa13.34□□□□□ -0.27
SNRNP40-201ENST00000263694 ATF3P18847 181 aa13.34□□□□□ -0.27
SNRNP40-201ENST00000263694 ORAI2Q96SN7 254 aa13.34□□□□□ -0.27
SNRNP40-201ENST00000263694 TERF2IPQ9NYB0 399 aa13.34□□□□□ -0.27
SNRNP40-201ENST00000263694 ACEP12821 1306 aa13.34□□□□□ -0.27
SNRNP40-201ENST00000263694 NCOA3Q9Y6Q9 1424 aa13.33□□□□□ -0.27
SNRNP40-201ENST00000263694 PLEKHG3A1L390 1219 aa13.33□□□□□ -0.28
SNRNP40-201ENST00000263694 HDGFL2Q7Z4V5 671 aaPredicted RBP13.33□□□□□ -0.28
SNRNP40-201ENST00000263694 MSH6P52701 1360 aa13.33□□□□□ -0.28
SNRNP40-201ENST00000263694 NINLQ9Y2I6 1382 aa13.33□□□□□ -0.28
SNRNP40-201ENST00000263694 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
SNRNP40-201ENST00000263694 ITSN1Q15811 1721 aa13.33□□□□□ -0.28
SNRNP40-201ENST00000263694 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
SNRNP40-201ENST00000263694 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
SNRNP40-201ENST00000263694 CPSF1Q10570 1443 aaKnown RBP13.32□□□□□ -0.28
SNRNP40-201ENST00000263694 NGDNQ8NEJ9 315 aaKnown RBP13.32□□□□□ -0.28
SNRNP40-201ENST00000263694 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
SNRNP40-201ENST00000263694 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
SNRNP40-201ENST00000263694 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNRNP40-201ENST00000263694 PRKRIP1Q9H875 184 aaPredicted RBP13.31□□□□□ -0.28
SNRNP40-201ENST00000263694 PHF8Q9UPP1 1060 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms