RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 BCANQ96GW7 911 aa21.32■■□□□ 1
VPS26A-201ENST00000263559 LTKP29376 864 aa21.32■■□□□ 1
VPS26A-201ENST00000263559 SRPK2P78362 688 aaKnown RBP21.31■■□□□ 1
VPS26A-201ENST00000263559 WAPLQ7Z5K2 1190 aa21.31■■□□□ 1
VPS26A-201ENST00000263559 NSD3Q9BZ95 1437 aa21.3■■□□□ 1
VPS26A-201ENST00000263559 PLEKHH1Q9ULM0 1364 aa21.29■■□□□ 1
VPS26A-201ENST00000263559 TXNDC2Q86VQ3 553 aa21.28■■□□□ 1
VPS26A-201ENST00000263559 RIMS1Q86UR5 1692 aaKnown RBP21.28■■□□□ 1
VPS26A-201ENST00000263559 ADAMTS13Q76LX8 1427 aa21.26■□□□□ 0.99
VPS26A-201ENST00000263559 PLEKHG1Q9ULL1 1385 aa21.26■□□□□ 0.99
VPS26A-201ENST00000263559 ANKRD36BQ8N2N9 1353 aa21.26■□□□□ 0.99
VPS26A-201ENST00000263559 CDK19Q9BWU1 502 aa21.26■□□□□ 0.99
VPS26A-201ENST00000263559 SLIT1O75093 1534 aa21.26■□□□□ 0.99
VPS26A-201ENST00000263559 SENP3-EIF4A1A0A087X0R7 540 aa21.25■□□□□ 0.99
VPS26A-201ENST00000263559 ARHGAP23Q9P227 1491 aa21.25■□□□□ 0.99
VPS26A-201ENST00000263559 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
VPS26A-201ENST00000263559 KNDC1Q76NI1 1749 aa21.25■□□□□ 0.99
VPS26A-201ENST00000263559 ATAD2Q6PL18 1390 aa21.25■□□□□ 0.99
VPS26A-201ENST00000263559 THEMISQ8N1K5 641 aaPredicted RBP21.24■□□□□ 0.99
VPS26A-201ENST00000263559 USP32Q8NFA0 1604 aa21.23■□□□□ 0.99
VPS26A-201ENST00000263559 NINLQ9Y2I6 1382 aa21.23■□□□□ 0.99
VPS26A-201ENST00000263559 TECPR2O15040 1411 aa21.22■□□□□ 0.99
VPS26A-201ENST00000263559 ADAMTSL3P82987 1691 aa21.22■□□□□ 0.99
VPS26A-201ENST00000263559 SIRT1Q96EB6 747 aa21.21■□□□□ 0.99
VPS26A-201ENST00000263559 A0A1W2PP64 1363 aa21.2■□□□□ 0.98
VPS26A-201ENST00000263559 SUPT16HQ9Y5B9 1047 aaKnown RBP21.2■□□□□ 0.98
VPS26A-201ENST00000263559 CPS1P31327 1500 aa21.2■□□□□ 0.98
VPS26A-201ENST00000263559 FAM135BQ49AJ0 1406 aa21.2■□□□□ 0.98
VPS26A-201ENST00000263559 CGNL1Q0VF96 1302 aa21.2■□□□□ 0.98
VPS26A-201ENST00000263559 MED14O60244 1454 aa21.2■□□□□ 0.98
VPS26A-201ENST00000263559 SLC26A8Q96RN1 970 aa21.19■□□□□ 0.98
VPS26A-201ENST00000263559 MORC1Q86VD1 984 aa21.19■□□□□ 0.98
VPS26A-201ENST00000263559 INSRP06213 1382 aa21.18■□□□□ 0.98
VPS26A-201ENST00000263559 CEP170BQ9Y4F5 1589 aaPredicted RBP21.18■□□□□ 0.98
VPS26A-201ENST00000263559 CD163L1Q9NR16 1453 aa21.17■□□□□ 0.98
VPS26A-201ENST00000263559 TERF2IPQ9NYB0 399 aa21.17■□□□□ 0.98
VPS26A-201ENST00000263559 ADAMTS8Q9UP79 889 aa21.17■□□□□ 0.98
VPS26A-201ENST00000263559 CABP1Q9NZU7 370 aa21.16■□□□□ 0.98
VPS26A-201ENST00000263559 BLMP54132 1417 aaPredicted RBP21.16■□□□□ 0.98
VPS26A-201ENST00000263559 WASLO00401 505 aaPredicted RBP21.16■□□□□ 0.98
VPS26A-201ENST00000263559 ROBO2Q9HCK4 1378 aa21.16■□□□□ 0.98
VPS26A-201ENST00000263559 FKBP8Q14318 412 aa21.15■□□□□ 0.98
VPS26A-201ENST00000263559 TNNT2P45379 298 aaPredicted RBP21.14■□□□□ 0.97
VPS26A-201ENST00000263559 WDR43Q15061 677 aaKnown RBP eCLIP21.14■□□□□ 0.97
VPS26A-201ENST00000263559 PTPRUQ92729 1446 aa21.14■□□□□ 0.97
VPS26A-201ENST00000263559 TBX22Q9Y458 520 aa21.13■□□□□ 0.97
VPS26A-201ENST00000263559 NSD2O96028 1365 aa21.13■□□□□ 0.97
VPS26A-201ENST00000263559 NEFLP07196 543 aa21.12■□□□□ 0.97
VPS26A-201ENST00000263559 HDGFL2Q7Z4V5 671 aaPredicted RBP21.12■□□□□ 0.97
VPS26A-201ENST00000263559 SALL2Q9Y467 1007 aaPredicted RBP21.12■□□□□ 0.97
VPS26A-201ENST00000263559 SMG6Q86US8 1419 aaKnown RBP21.11■□□□□ 0.97
VPS26A-201ENST00000263559 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
VPS26A-201ENST00000263559 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.1■□□□□ 0.97
VPS26A-201ENST00000263559 NUDCQ9Y266 331 aa21.09■□□□□ 0.97
VPS26A-201ENST00000263559 AMOTL2Q9Y2J4 779 aa21.09■□□□□ 0.97
VPS26A-201ENST00000263559 POLR3AO14802 1390 aaPredicted RBP21.09■□□□□ 0.97
VPS26A-201ENST00000263559 ZNF142P52746 1687 aaPredicted RBP21.08■□□□□ 0.97
VPS26A-201ENST00000263559 DIP2AQ14689 1571 aa21.08■□□□□ 0.97
VPS26A-201ENST00000263559 FYB1O15117 783 aa21.08■□□□□ 0.96
VPS26A-201ENST00000263559 NUDT16Q96DE0 195 aaKnown RBP21.08■□□□□ 0.96
VPS26A-201ENST00000263559 GGNBP2Q9H3C7 697 aa21.08■□□□□ 0.96
VPS26A-201ENST00000263559 ATP7BP35670 1465 aa21.07■□□□□ 0.96
VPS26A-201ENST00000263559 PPIP5K1Q6PFW1 1433 aa21.06■□□□□ 0.96
VPS26A-201ENST00000263559 ANKRD26Q9UPS8 1709 aa21.06■□□□□ 0.96
VPS26A-201ENST00000263559 MTHFSP49914 203 aa21.05■□□□□ 0.96
VPS26A-201ENST00000263559 ADGRB2O60241 1585 aa21.05■□□□□ 0.96
VPS26A-201ENST00000263559 NCKAP5LQ9HCH0 1330 aa21.05■□□□□ 0.96
VPS26A-201ENST00000263559 CCDC61Q9Y6R9 512 aa21.04■□□□□ 0.96
VPS26A-201ENST00000263559 KIF20BQ96Q89 1820 aa21.04■□□□□ 0.96
VPS26A-201ENST00000263559 ANKLE2Q86XL3 938 aa21.03■□□□□ 0.96
VPS26A-201ENST00000263559 PRR36Q9H6K5 1346 aa21.03■□□□□ 0.96
VPS26A-201ENST00000263559 CPSF1Q10570 1443 aaKnown RBP21.03■□□□□ 0.96
VPS26A-201ENST00000263559 SHPRHQ149N8 1683 aa21.02■□□□□ 0.96
VPS26A-201ENST00000263559 PTCH1Q13635 1447 aa21.02■□□□□ 0.95
VPS26A-201ENST00000263559 PDE3BQ13370 1112 aa21.01■□□□□ 0.95
VPS26A-201ENST00000263559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.01■□□□□ 0.95
VPS26A-201ENST00000263559 CCDC146Q8IYE0 955 aa21.01■□□□□ 0.95
VPS26A-201ENST00000263559 XRN1Q8IZH2 1706 aaKnown RBP21■□□□□ 0.95
VPS26A-201ENST00000263559 CDC42BPGQ6DT37 1551 aa21■□□□□ 0.95
VPS26A-201ENST00000263559 IRX6P78412 446 aaPredicted RBP21■□□□□ 0.95
VPS26A-201ENST00000263559 CDCA7LQ96GN5 454 aa20.98■□□□□ 0.95
VPS26A-201ENST00000263559 CFAP53Q96M91 514 aa20.98■□□□□ 0.95
VPS26A-201ENST00000263559 PIK3R4Q99570 1358 aa20.98■□□□□ 0.95
VPS26A-201ENST00000263559 AKAP12Q02952 1782 aa20.97■□□□□ 0.95
VPS26A-201ENST00000263559 EDC4Q6P2E9 1401 aaKnown RBP20.97■□□□□ 0.95
VPS26A-201ENST00000263559 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
VPS26A-201ENST00000263559 MON2Q7Z3U7 1717 aa20.97■□□□□ 0.95
VPS26A-201ENST00000263559 ITSN1Q15811 1721 aa20.97■□□□□ 0.95
VPS26A-201ENST00000263559 KCNA6P17658 529 aa20.96■□□□□ 0.95
VPS26A-201ENST00000263559 TOPAZ1Q8N9V7 1692 aa20.95■□□□□ 0.94
VPS26A-201ENST00000263559 APAF1O14727 1248 aa20.94■□□□□ 0.94
VPS26A-201ENST00000263559 ZNF692Q9BU19 519 aaPredicted RBP20.94■□□□□ 0.94
VPS26A-201ENST00000263559 CHD2O14647 1828 aaKnown RBP20.94■□□□□ 0.94
VPS26A-201ENST00000263559 NME9Q86XW9 330 aa20.92■□□□□ 0.94
VPS26A-201ENST00000263559 ZNF521Q96K83 1311 aa20.92■□□□□ 0.94
VPS26A-201ENST00000263559 PLEKHG3A1L390 1219 aa20.91■□□□□ 0.94
VPS26A-201ENST00000263559 ACEP12821 1306 aa20.91■□□□□ 0.94
VPS26A-201ENST00000263559 RNF123Q5XPI4 1314 aa20.91■□□□□ 0.94
VPS26A-201ENST00000263559 ZRANB1Q9UGI0 708 aa20.9■□□□□ 0.94
VPS26A-201ENST00000263559 NKTRP30414 1462 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms