RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 TBC1D2Q9BYX2 928 aa22.27■■□□□ 1.16
TRAM1-201ENST00000262213 ABCA6Q8N139 1617 aa22.27■■□□□ 1.16
TRAM1-201ENST00000262213 TMEM132EQ6IEE7 984 aa22.27■■□□□ 1.15
TRAM1-201ENST00000262213 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.15
TRAM1-201ENST00000262213 NLRP1Q9C000 1473 aa22.26■■□□□ 1.15
TRAM1-201ENST00000262213 ZFYVE16Q7Z3T8 1539 aa22.25■■□□□ 1.15
TRAM1-201ENST00000262213 TBC1D32Q96NH3 1257 aa22.25■■□□□ 1.15
TRAM1-201ENST00000262213 RWDD1Q9H446 243 aaPredicted RBP22.25■■□□□ 1.15
TRAM1-201ENST00000262213 SLC24A1O60721 1099 aa22.24■■□□□ 1.15
TRAM1-201ENST00000262213 GZF1Q9H116 711 aaPredicted RBP22.24■■□□□ 1.15
TRAM1-201ENST00000262213 TET3O43151 1660 aa22.24■■□□□ 1.15
TRAM1-201ENST00000262213 U2AF1L5P0DN76 240 aaPredicted RBP22.23■■□□□ 1.15
TRAM1-201ENST00000262213 U2AF1Q01081 240 aaKnown RBP eCLIP22.23■■□□□ 1.15
TRAM1-201ENST00000262213 ANTXR1Q9H6X2 564 aa22.23■■□□□ 1.15
TRAM1-201ENST00000262213 MAP3K4Q9Y6R4 1608 aa22.23■■□□□ 1.15
TRAM1-201ENST00000262213 FTSJ3Q8IY81 847 aaKnown RBP22.23■■□□□ 1.15
TRAM1-201ENST00000262213 MFAP1P55081 439 aaKnown RBP22.22■■□□□ 1.15
TRAM1-201ENST00000262213 FAM43AQ8N2R8 423 aa22.22■■□□□ 1.15
TRAM1-201ENST00000262213 TSR2Q969E8 191 aaKnown RBP22.22■■□□□ 1.15
TRAM1-201ENST00000262213 NUTM2DQ5VT03 806 aaPredicted RBP22.21■■□□□ 1.15
TRAM1-201ENST00000262213 CFAP53Q96M91 514 aa22.21■■□□□ 1.15
TRAM1-201ENST00000262213 RTEL1-TNFRSF6BF6WH68 1400 aa22.2■■□□□ 1.14
TRAM1-201ENST00000262213 NOS1P29475 1434 aa22.2■■□□□ 1.14
TRAM1-201ENST00000262213 WDR63Q8IWG1 891 aa22.2■■□□□ 1.14
TRAM1-201ENST00000262213 KIAA1210Q9ULL0 1709 aa22.2■■□□□ 1.14
TRAM1-201ENST00000262213 SHPRHQ149N8 1683 aa22.19■■□□□ 1.14
TRAM1-201ENST00000262213 MVPQ14764 893 aaKnown RBP22.18■■□□□ 1.14
TRAM1-201ENST00000262213 MYH16Q9H6N6 1097 aa22.17■■□□□ 1.14
TRAM1-201ENST00000262213 CFAP65Q6ZU64 1925 aaKnown RBP22.17■■□□□ 1.14
TRAM1-201ENST00000262213 SAFB2Q14151 953 aaKnown RBP eCLIP22.17■■□□□ 1.14
TRAM1-201ENST00000262213 ZKSCAN2Q63HK3 967 aa22.17■■□□□ 1.14
TRAM1-201ENST00000262213 ATP7AQ04656 1500 aa22.16■■□□□ 1.14
TRAM1-201ENST00000262213 DEPDC5O75140 1603 aa22.16■■□□□ 1.14
TRAM1-201ENST00000262213 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
TRAM1-201ENST00000262213 SMC4Q9NTJ3 1288 aa22.16■■□□□ 1.14
TRAM1-201ENST00000262213 MYOM2P54296 1465 aa22.16■■□□□ 1.14
TRAM1-201ENST00000262213 U2SURPO15042 1029 aaKnown RBP22.16■■□□□ 1.14
TRAM1-201ENST00000262213 KIF1BO60333 1816 aa22.15■■□□□ 1.14
TRAM1-201ENST00000262213 PHF23Q9BUL5 403 aaPredicted RBP22.15■■□□□ 1.14
TRAM1-201ENST00000262213 L1TD1Q5T7N2 865 aaKnown RBP22.15■■□□□ 1.14
TRAM1-201ENST00000262213 ITPRIPQ8IWB1 547 aa22.15■■□□□ 1.14
TRAM1-201ENST00000262213 IQSEC2Q5JU85 1478 aa22.15■■□□□ 1.14
TRAM1-201ENST00000262213 C22orf23Q9BZE7 217 aa22.14■■□□□ 1.14
TRAM1-201ENST00000262213 RRAGDQ9NQL2 400 aaPredicted RBP22.14■■□□□ 1.14
TRAM1-201ENST00000262213 MROH2AA6NES4 1674 aa22.13■■□□□ 1.13
TRAM1-201ENST00000262213 ARAP3Q8WWN8 1544 aa22.13■■□□□ 1.13
TRAM1-201ENST00000262213 EXOSC9Q06265 439 aaKnown RBP22.13■■□□□ 1.13
TRAM1-201ENST00000262213 ASXL2Q76L83 1435 aa22.13■■□□□ 1.13
TRAM1-201ENST00000262213 AAMPQ13685 434 aa22.12■■□□□ 1.13
TRAM1-201ENST00000262213 FANCAO15360 1455 aa22.12■■□□□ 1.13
TRAM1-201ENST00000262213 ABCA9Q8IUA7 1624 aa22.11■■□□□ 1.13
TRAM1-201ENST00000262213 MCM4P33991 863 aa22.11■■□□□ 1.13
TRAM1-201ENST00000262213 CABP2Q9NPB3 220 aa22.1■■□□□ 1.13
TRAM1-201ENST00000262213 ZNF518AQ6AHZ1 1483 aa22.1■■□□□ 1.13
TRAM1-201ENST00000262213 GOLGA6L3A6NEY3 463 aa22.1■■□□□ 1.13
TRAM1-201ENST00000262213 GGT6Q6P531 493 aa22.1■■□□□ 1.13
TRAM1-201ENST00000262213 PANK2Q9BZ23 570 aa22.1■■□□□ 1.13
TRAM1-201ENST00000262213 SBNO2Q9Y2G9 1366 aa22.09■■□□□ 1.13
TRAM1-201ENST00000262213 VWDEQ8N2E2 1590 aa22.09■■□□□ 1.13
TRAM1-201ENST00000262213 TRIM27P14373 513 aa22.09■■□□□ 1.13
TRAM1-201ENST00000262213 CCDC27Q2M243 656 aa22.09■■□□□ 1.13
TRAM1-201ENST00000262213 XRCC6P12956 609 aaKnown RBP eCLIP22.08■■□□□ 1.13
TRAM1-201ENST00000262213 RSPH6AQ9H0K4 717 aa22.08■■□□□ 1.13
TRAM1-201ENST00000262213 SSH1Q8WYL5 1049 aa22.08■■□□□ 1.12
TRAM1-201ENST00000262213 ADGRL1O94910 1474 aa22.07■■□□□ 1.12
TRAM1-201ENST00000262213 C14orf93Q9H972 538 aaKnown RBP22.07■■□□□ 1.12
TRAM1-201ENST00000262213 QRICH2Q9H0J4 1663 aa22.06■■□□□ 1.12
TRAM1-201ENST00000262213 NOB1Q9ULX3 412 aaKnown RBP22.06■■□□□ 1.12
TRAM1-201ENST00000262213 MROH1Q8NDA8 1641 aa22.06■■□□□ 1.12
TRAM1-201ENST00000262213 GGNBP2Q9H3C7 697 aa22.05■■□□□ 1.12
TRAM1-201ENST00000262213 INO80Q9ULG1 1556 aaPredicted RBP22.05■■□□□ 1.12
TRAM1-201ENST00000262213 CHMP5Q9NZZ3 219 aa22.05■■□□□ 1.12
TRAM1-201ENST00000262213 MYO3AQ8NEV4 1616 aa22.04■■□□□ 1.12
TRAM1-201ENST00000262213 IFT172Q9UG01 1749 aa22.04■■□□□ 1.12
TRAM1-201ENST00000262213 TRAK2O60296 914 aa22.04■■□□□ 1.12
TRAM1-201ENST00000262213 HSCBQ8IWL3 235 aa22.04■■□□□ 1.12
TRAM1-201ENST00000262213 EFCAB6Q5THR3 1501 aa22.03■■□□□ 1.12
TRAM1-201ENST00000262213 PPRC1Q5VV67 1664 aaKnown RBP22.03■■□□□ 1.12
TRAM1-201ENST00000262213 TMEM57Q8N5G2 664 aa22.03■■□□□ 1.12
TRAM1-201ENST00000262213 STK26Q9P289 416 aa22.03■■□□□ 1.12
TRAM1-201ENST00000262213 NRXN1Q9ULB1 1477 aa22.02■■□□□ 1.12
TRAM1-201ENST00000262213 EVC2Q86UK5 1308 aa22.02■■□□□ 1.12
TRAM1-201ENST00000262213 TMPOP42166 694 aaKnown RBP22.02■■□□□ 1.12
TRAM1-201ENST00000262213 ATF7IPQ6VMQ6 1270 aa22.02■■□□□ 1.12
TRAM1-201ENST00000262213 DDX19BQ9UMR2 479 aa22.02■■□□□ 1.12
TRAM1-201ENST00000262213 LNPKQ9C0E8 428 aa22.01■■□□□ 1.11
TRAM1-201ENST00000262213 RIMBP3CA6NJZ7 1639 aa22.01■■□□□ 1.11
TRAM1-201ENST00000262213 RIMBP3BA6NNM3 1639 aa22.01■■□□□ 1.11
TRAM1-201ENST00000262213 RIMBP3Q9UFD9 1639 aa22.01■■□□□ 1.11
TRAM1-201ENST00000262213 NPM1P06748 294 aaKnown RBP eCLIP22.01■■□□□ 1.11
TRAM1-201ENST00000262213 ZMYM3Q14202 1370 aa22.01■■□□□ 1.11
TRAM1-201ENST00000262213 TRIM35Q9UPQ4 493 aa22■■□□□ 1.11
TRAM1-201ENST00000262213 SRPK2P78362 688 aaKnown RBP21.99■■□□□ 1.11
TRAM1-201ENST00000262213 NEURL4Q96JN8 1562 aa21.99■■□□□ 1.11
TRAM1-201ENST00000262213 HDAC1Q13547 482 aaPredicted RBP21.99■■□□□ 1.11
TRAM1-201ENST00000262213 FOXD4L1Q9NU39 408 aa21.99■■□□□ 1.11
TRAM1-201ENST00000262213 RIPK4P57078 832 aa21.98■■□□□ 1.11
TRAM1-201ENST00000262213 CD109Q6YHK3 1445 aa21.97■■□□□ 1.11
TRAM1-201ENST00000262213 FSD2A1L4K1 749 aa21.97■■□□□ 1.11
TRAM1-201ENST00000262213 ADGRB3O60242 1522 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms