RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 SETQ01105 290 aaPredicted RBP12.42□□□□□ -0.42
PHF3-201ENST00000262043 ERC2O15083 957 aa12.42□□□□□ -0.42
PHF3-201ENST00000262043 IPO7O95373 1038 aaKnown RBP12.42□□□□□ -0.42
PHF3-201ENST00000262043 CCDC47Q96A33 483 aaKnown RBP12.42□□□□□ -0.42
PHF3-201ENST00000262043 NEUROD6Q96NK8 337 aa12.41□□□□□ -0.42
PHF3-201ENST00000262043 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
PHF3-201ENST00000262043 FYCO1Q9BQS8 1478 aa12.41□□□□□ -0.42
PHF3-201ENST00000262043 NINLQ9Y2I6 1382 aa12.4□□□□□ -0.42
PHF3-201ENST00000262043 FYB1O15117 783 aa12.4□□□□□ -0.42
PHF3-201ENST00000262043 NUCB2P80303 420 aa12.4□□□□□ -0.42
PHF3-201ENST00000262043 TMEM132EQ6IEE7 984 aa12.4□□□□□ -0.42
PHF3-201ENST00000262043 RRBP1Q9P2E9 1410 aaKnown RBP12.4□□□□□ -0.42
PHF3-201ENST00000262043 ZNF771Q7L3S4 317 aaPredicted RBP12.4□□□□□ -0.42
PHF3-201ENST00000262043 NCOA2Q15596 1464 aa12.4□□□□□ -0.42
PHF3-201ENST00000262043 RAPGEF4Q8WZA2 1011 aa12.39□□□□□ -0.43
PHF3-201ENST00000262043 ATF3P18847 181 aa12.39□□□□□ -0.43
PHF3-201ENST00000262043 UBTFL1P0CB47 393 aaPredicted RBP12.39□□□□□ -0.43
PHF3-201ENST00000262043 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
PHF3-201ENST00000262043 HSP90AB4PQ58FF6 505 aa12.38□□□□□ -0.43
PHF3-201ENST00000262043 BCL11BQ9C0K0 894 aaPredicted RBP12.38□□□□□ -0.43
PHF3-201ENST00000262043 WASHC4Q2M389 1173 aa12.38□□□□□ -0.43
PHF3-201ENST00000262043 RALYLQ86SE5 291 aaKnown RBP12.38□□□□□ -0.43
PHF3-201ENST00000262043 ANKRD50Q9ULJ7 1429 aa12.38□□□□□ -0.43
PHF3-201ENST00000262043 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
PHF3-201ENST00000262043 SAFBQ15424 915 aaKnown RBP eCLIP12.38□□□□□ -0.434e-8■□□□□ 8.4
PHF3-201ENST00000262043 PATL2C9JE40 543 aaKnown RBP12.38□□□□□ -0.43
PHF3-201ENST00000262043 MTHFSP49914 203 aa12.37□□□□□ -0.43
PHF3-201ENST00000262043 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
PHF3-201ENST00000262043 CNTROBQ8N137 903 aa12.37□□□□□ -0.43
PHF3-201ENST00000262043 RBM33Q96EV2 1170 aaKnown RBP12.37□□□□□ -0.43
PHF3-201ENST00000262043 ADAMTS8Q9UP79 889 aa12.37□□□□□ -0.43
PHF3-201ENST00000262043 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
PHF3-201ENST00000262043 CCDC43Q96MW1 224 aaKnown RBP12.37□□□□□ -0.43
PHF3-201ENST00000262043 FAM13BQ9NYF5 915 aa12.37□□□□□ -0.43
PHF3-201ENST00000262043 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
PHF3-201ENST00000262043 KDM4AO75164 1064 aa12.37□□□□□ -0.43
PHF3-201ENST00000262043 BRD4O60885 1362 aaPredicted RBP12.36□□□□□ -0.43
PHF3-201ENST00000262043 NAP1L1P55209 391 aaKnown RBP12.36□□□□□ -0.43
PHF3-201ENST00000262043 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
PHF3-201ENST00000262043 CCDC73Q6ZRK6 1079 aa12.36□□□□□ -0.43
PHF3-201ENST00000262043 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.36□□□□□ -0.43
PHF3-201ENST00000262043 IGF1RP08069 1367 aa12.36□□□□□ -0.43
PHF3-201ENST00000262043 CDC45O75419 566 aa12.35□□□□□ -0.43
PHF3-201ENST00000262043 HECW1Q76N89 1606 aa12.35□□□□□ -0.43
PHF3-201ENST00000262043 CASKIN1Q8WXD9 1431 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.433e-7■■■□□ 16.4
PHF3-201ENST00000262043 TEX35Q5T0J7 233 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 ABTB2Q8N961 1025 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 NLRP2Q9NX02 1062 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 MTMR7Q9Y216 660 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 EPS15P42566 896 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 PSMA5P28066 241 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 NFKBIBQ15653 356 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 SYNJ1O43426 1573 aa12.34□□□□□ -0.43
PHF3-201ENST00000262043 CCDC30Q5VVM6 783 aa12.33□□□□□ -0.43
PHF3-201ENST00000262043 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.33□□□□□ -0.43
PHF3-201ENST00000262043 NAT10Q9H0A0 1025 aaKnown RBP12.33□□□□□ -0.43
PHF3-201ENST00000262043 C1orf115Q9H7X2 142 aa12.33□□□□□ -0.43
PHF3-201ENST00000262043 NASPP49321 788 aaPredicted RBP12.33□□□□□ -0.44
PHF3-201ENST00000262043 BRMS1Q9HCU9 246 aa12.33□□□□□ -0.44
PHF3-201ENST00000262043 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
PHF3-201ENST00000262043 NLRP6P59044 892 aa12.33□□□□□ -0.44
PHF3-201ENST00000262043 CFTRP13569 1480 aa12.33□□□□□ -0.44
PHF3-201ENST00000262043 AAMPQ13685 434 aa12.33□□□□□ -0.44
PHF3-201ENST00000262043 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
PHF3-201ENST00000262043 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
PHF3-201ENST00000262043 FSD1Q9BTV5 496 aa12.32□□□□□ -0.44
PHF3-201ENST00000262043 PDILTQ8N807 584 aa12.32□□□□□ -0.44
PHF3-201ENST00000262043 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
PHF3-201ENST00000262043 RUFY1Q96T51 708 aa12.31□□□□□ -0.44
PHF3-201ENST00000262043 SMG6Q86US8 1419 aaKnown RBP12.31□□□□□ -0.44
PHF3-201ENST00000262043 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
PHF3-201ENST00000262043 XBP1P17861 261 aa12.31□□□□□ -0.44
PHF3-201ENST00000262043 DNAJC2Q99543 621 aaKnown RBP12.31□□□□□ -0.44
PHF3-201ENST00000262043 KIF6Q6ZMV9 814 aa12.31□□□□□ -0.44
PHF3-201ENST00000262043 NOB1Q9ULX3 412 aaKnown RBP12.31□□□□□ -0.44
PHF3-201ENST00000262043 CLASRPQ8N2M8 674 aaKnown RBP12.31□□□□□ -0.44
PHF3-201ENST00000262043 TCP11L2Q8N4U5 519 aa12.31□□□□□ -0.44
PHF3-201ENST00000262043 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
PHF3-201ENST00000262043 CWC22Q9HCG8 908 aaKnown RBP12.31□□□□□ -0.44
PHF3-201ENST00000262043 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
PHF3-201ENST00000262043 SDF4Q9BRK5 362 aa12.3□□□□□ -0.44
PHF3-201ENST00000262043 STAC3Q96MF2 364 aa12.3□□□□□ -0.44
PHF3-201ENST00000262043 SYNJ2O15056 1496 aa12.3□□□□□ -0.44
PHF3-201ENST00000262043 FAM177BA6PVY3 158 aa12.3□□□□□ -0.44
PHF3-201ENST00000262043 CAVIN1Q6NZI2 390 aaKnown RBP12.3□□□□□ -0.44
PHF3-201ENST00000262043 AKNAQ7Z591 1439 aa12.3□□□□□ -0.44
PHF3-201ENST00000262043 CT47A1Q5JQC4 288 aaPredicted RBP12.3□□□□□ -0.44
PHF3-201ENST00000262043 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
PHF3-201ENST00000262043 PPP2R1AP30153 589 aa12.3□□□□□ -0.44
PHF3-201ENST00000262043 PRKAR2BP31323 418 aa12.29□□□□□ -0.44
PHF3-201ENST00000262043 ZNF428Q96B54 188 aa12.29□□□□□ -0.44
PHF3-201ENST00000262043 MNS1Q8NEH6 495 aa12.29□□□□□ -0.44
PHF3-201ENST00000262043 ODF2Q5BJF6 829 aa12.29□□□□□ -0.44
PHF3-201ENST00000262043 TTLL5Q6EMB2 1281 aa12.29□□□□□ -0.44
PHF3-201ENST00000262043 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
PHF3-201ENST00000262043 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
PHF3-201ENST00000262043 ESCO1Q5FWF5 840 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms