RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 IRF6O14896 467 aa7.51□□□□□ -1.21
CDRT1-201ENST00000261644 ZBTB24O43167 697 aaPredicted RBP7.51□□□□□ -1.21
CDRT1-201ENST00000261644 KDM4AO75164 1064 aa7.51□□□□□ -1.21
CDRT1-201ENST00000261644 DXOO77932 396 aaKnown RBP7.51□□□□□ -1.21
CDRT1-201ENST00000261644 FOXC1Q12948 553 aa7.51□□□□□ -1.21
CDRT1-201ENST00000261644 CYP4X1Q8N118 509 aa7.51□□□□□ -1.21
CDRT1-201ENST00000261644 KDM2AQ9Y2K7 1162 aa7.51□□□□□ -1.21
CDRT1-201ENST00000261644 TULP1O00294 542 aaPredicted RBP7.5□□□□□ -1.21
CDRT1-201ENST00000261644 ST8SIA5O15466 376 aa7.5□□□□□ -1.21
CDRT1-201ENST00000261644 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
CDRT1-201ENST00000261644 TRIM32Q13049 653 aa7.49□□□□□ -1.21
CDRT1-201ENST00000261644 USB1Q9BQ65 265 aaKnown RBP7.49□□□□□ -1.21
CDRT1-201ENST00000261644 REPIN1Q9BWE0 567 aaKnown RBP7.48□□□□□ -1.21
CDRT1-201ENST00000261644 AXIN1O15169 862 aa7.47□□□□□ -1.21
CDRT1-201ENST00000261644 HAP1P54257 671 aaPredicted RBP7.47□□□□□ -1.21
CDRT1-201ENST00000261644 TREML4Q6UXN2 200 aa7.47□□□□□ -1.21
CDRT1-201ENST00000261644 VSIG10Q8N0Z9 540 aa7.47□□□□□ -1.21
CDRT1-201ENST00000261644 SNIP1Q8TAD8 396 aaKnown RBP7.47□□□□□ -1.21
CDRT1-201ENST00000261644 HOXA2O43364 376 aa7.46□□□□□ -1.22
CDRT1-201ENST00000261644 SMPD1P17405 629 aa7.45□□□□□ -1.22
CDRT1-201ENST00000261644 CLCN1P35523 988 aa7.45□□□□□ -1.22
CDRT1-201ENST00000261644 WNT7BP56706 349 aa7.45□□□□□ -1.22
CDRT1-201ENST00000261644 GPCPD1Q9NPB8 672 aa7.45□□□□□ -1.22
CDRT1-201ENST00000261644 TTC24A2A3L6 582 aaPredicted RBP7.44□□□□□ -1.22
CDRT1-201ENST00000261644 MDM2Q00987 491 aaPredicted RBP7.44□□□□□ -1.22
CDRT1-201ENST00000261644 CCDC102AQ96A19 550 aa7.44□□□□□ -1.22
CDRT1-201ENST00000261644 FAM217BQ9NTX9 383 aaPredicted RBP7.44□□□□□ -1.22
CDRT1-201ENST00000261644 JUNDP17535 347 aa7.42□□□□□ -1.22
CDRT1-201ENST00000261644 MRGPRX2Q96LB1 330 aa7.42□□□□□ -1.22
CDRT1-201ENST00000261644 DACH1Q9UI36 760 aa7.42□□□□□ -1.22
CDRT1-201ENST00000261644 RETREG3Q86VR2 466 aa7.41□□□□□ -1.22
CDRT1-201ENST00000261644 GMPR2Q9P2T1 348 aaKnown RBP7.41□□□□□ -1.22
CDRT1-201ENST00000261644 C11orf95C9JLR9 678 aaPredicted RBP7.39□□□□□ -1.23
CDRT1-201ENST00000261644 HLA-CQ95604 372 aa7.39□□□□□ -1.23
CDRT1-201ENST00000261644 SENP2Q9HC62 589 aa7.39□□□□□ -1.23
CDRT1-201ENST00000261644 ATP13A2Q9NQ11 1180 aa7.39□□□□□ -1.23
CDRT1-201ENST00000261644 SKOR1P84550 965 aa7.38□□□□□ -1.23
CDRT1-201ENST00000261644 RC3H1Q5TC82 1133 aaKnown RBP7.38□□□□□ -1.23
CDRT1-201ENST00000261644 TRIM47Q96LD4 638 aa7.38□□□□□ -1.23
CDRT1-201ENST00000261644 J3QL48 77 aa7.37□□□□□ -1.23
CDRT1-201ENST00000261644 WIPF1O43516 503 aa7.37□□□□□ -1.23
CDRT1-201ENST00000261644 WFS1O76024 890 aa7.37□□□□□ -1.23
CDRT1-201ENST00000261644 NFX1Q12986 1120 aaKnown RBP7.37□□□□□ -1.23
CDRT1-201ENST00000261644 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.36□□□□□ -1.23
CDRT1-201ENST00000261644 NUTM1Q86Y26 1132 aa7.36□□□□□ -1.23
CDRT1-201ENST00000261644 KIFC2Q96AC6 838 aa7.36□□□□□ -1.23
CDRT1-201ENST00000261644 SIAH2O43255 324 aa7.35□□□□□ -1.23
CDRT1-201ENST00000261644 GUCA2AQ02747 115 aa7.35□□□□□ -1.23
CDRT1-201ENST00000261644 NUDT12Q9BQG2 462 aa7.35□□□□□ -1.23
CDRT1-201ENST00000261644 FDX1P10109 184 aa7.34□□□□□ -1.23
CDRT1-201ENST00000261644 GJA5P36382 358 aa7.34□□□□□ -1.23
CDRT1-201ENST00000261644 AMHR2Q16671 573 aa7.34□□□□□ -1.23
CDRT1-201ENST00000261644 PTPRNQ16849 979 aa7.34□□□□□ -1.23
CDRT1-201ENST00000261644 DESI1Q6ICB0 168 aa7.34□□□□□ -1.23
CDRT1-201ENST00000261644 CCDC24Q8N4L8 307 aa7.34□□□□□ -1.23
CDRT1-201ENST00000261644 HPS1Q92902 700 aa7.34□□□□□ -1.23
CDRT1-201ENST00000261644 SPDYE5A6NIY4 337 aa7.33□□□□□ -1.24
CDRT1-201ENST00000261644 SLC24A1O60721 1099 aa7.33□□□□□ -1.24
CDRT1-201ENST00000261644 CCNYL3P0C7X3 344 aa7.33□□□□□ -1.24
CDRT1-201ENST00000261644 MPNDQ8N594 471 aa7.33□□□□□ -1.24
CDRT1-201ENST00000261644 KRI1Q8N9T8 703 aaKnown RBP7.33□□□□□ -1.24
CDRT1-201ENST00000261644 PCDHGC3Q9UN70 934 aa7.33□□□□□ -1.24
CDRT1-201ENST00000261644 MS4A1P11836 297 aa7.32□□□□□ -1.24
CDRT1-201ENST00000261644 BARGINQ6ZT62 677 aa7.32□□□□□ -1.24
CDRT1-201ENST00000261644 SYMPKQ92797 1274 aaKnown RBP7.32□□□□□ -1.24
CDRT1-201ENST00000261644 SSTR3P32745 418 aaPredicted RBP7.31□□□□□ -1.24
CDRT1-201ENST00000261644 PTCRAQ6ISU1 281 aaPredicted RBP7.31□□□□□ -1.24
CDRT1-201ENST00000261644 SPIRE2Q8WWL2 714 aa7.31□□□□□ -1.24
CDRT1-201ENST00000261644 EVA1BQ9NVM1 165 aa7.31□□□□□ -1.24
CDRT1-201ENST00000261644 TERTO14746 1132 aaKnown RBP7.3□□□□□ -1.24
CDRT1-201ENST00000261644 ZMYND10O75800 440 aa7.3□□□□□ -1.24
CDRT1-201ENST00000261644 SNRPBP14678 240 aaKnown RBP7.3□□□□□ -1.24
CDRT1-201ENST00000261644 STK17AQ9UEE5 414 aa7.3□□□□□ -1.24
CDRT1-201ENST00000261644 C6orf229H3BNL8 230 aa7.29□□□□□ -1.24
CDRT1-201ENST00000261644 ALDH1A1P00352 501 aa7.29□□□□□ -1.24
CDRT1-201ENST00000261644 SH3BP2P78314 561 aa7.29□□□□□ -1.24
CDRT1-201ENST00000261644 INSM1Q01101 510 aaPredicted RBP7.29□□□□□ -1.24
CDRT1-201ENST00000261644 DIXDC1Q155Q3 683 aa7.29□□□□□ -1.24
CDRT1-201ENST00000261644 NPAS3Q8IXF0 933 aa7.29□□□□□ -1.24
CDRT1-201ENST00000261644 EHBP1Q8NDI1 1231 aa7.29□□□□□ -1.24
CDRT1-201ENST00000261644 NISCHQ9Y2I1 1504 aa7.28□□□□□ -1.24
CDRT1-201ENST00000261644 KCNH2Q12809 1159 aa7.27□□□□□ -1.25
CDRT1-201ENST00000261644 MTMR2Q13614 643 aa7.27□□□□□ -1.25
CDRT1-201ENST00000261644 LCE2CQ5TA81 110 aa7.27□□□□□ -1.25
CDRT1-201ENST00000261644 UNC93B1Q9H1C4 597 aa7.27□□□□□ -1.25
CDRT1-201ENST00000261644 MOXD2PA6NHM9 499 aa7.26□□□□□ -1.25
CDRT1-201ENST00000261644 VARSP26640 1264 aaKnown RBP7.26□□□□□ -1.25
CDRT1-201ENST00000261644 GIGYF2Q6Y7W6 1299 aaKnown RBP7.26□□□□□ -1.25
CDRT1-201ENST00000261644 PRR7Q8TB68 274 aa7.26□□□□□ -1.25
CDRT1-201ENST00000261644 TTLL12Q14166 644 aaPredicted RBP7.25□□□□□ -1.25
CDRT1-201ENST00000261644 ZNF511Q8NB15 262 aa7.25□□□□□ -1.25
CDRT1-201ENST00000261644 WASF2Q9Y6W5 498 aa7.25□□□□□ -1.25
CDRT1-201ENST00000261644 PLEKHG3A1L390 1219 aa7.24□□□□□ -1.25
CDRT1-201ENST00000261644 CAPN5O15484 640 aaPredicted RBP7.24□□□□□ -1.25
CDRT1-201ENST00000261644 NDUFV2P19404 249 aa7.24□□□□□ -1.25
CDRT1-201ENST00000261644 TRIM46Q7Z4K8 759 aa7.24□□□□□ -1.25
CDRT1-201ENST00000261644 PRPF38BQ5VTL8 546 aaKnown RBP7.23□□□□□ -1.25
CDRT1-201ENST00000261644 RSBN1LQ6PCB5 846 aaPredicted RBP7.23□□□□□ -1.25
CDRT1-201ENST00000261644 LYPD8Q6UX82 237 aa7.23□□□□□ -1.25
CDRT1-201ENST00000261644 ZC3H15Q8WU90 426 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms