RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 PIK3R4Q99570 1358 aa24.07■■□□□ 1.44
SSB-201ENST00000260956 RALBP1Q15311 655 aa24.07■■□□□ 1.44
SSB-201ENST00000260956 TMEM132EQ6IEE7 984 aa24.07■■□□□ 1.44
SSB-201ENST00000260956 FAM9BQ8IZU0 186 aa24.07■■□□□ 1.44
SSB-201ENST00000260956 C14orf93Q9H972 538 aaKnown RBP24.06■■□□□ 1.44
SSB-201ENST00000260956 MYBBP1AQ9BQG0 1328 aaKnown RBP24.05■■□□□ 1.44
SSB-201ENST00000260956 PNISRQ8TF01 805 aaKnown RBP24.05■■□□□ 1.44
SSB-201ENST00000260956 ASXL1Q8IXJ9 1541 aa24.04■■□□□ 1.44
SSB-201ENST00000260956 TMEM94Q12767 1356 aa24.04■■□□□ 1.44
SSB-201ENST00000260956 TMF1P82094 1093 aa24.03■■□□□ 1.44
SSB-201ENST00000260956 FKBP8Q14318 412 aa24.03■■□□□ 1.44
SSB-201ENST00000260956 PROSER2Q86WR7 435 aaPredicted RBP24.03■■□□□ 1.44
SSB-201ENST00000260956 ADGRB1O14514 1584 aa24.02■■□□□ 1.44
SSB-201ENST00000260956 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
SSB-201ENST00000260956 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
SSB-201ENST00000260956 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
SSB-201ENST00000260956 XIRP1Q702N8 1843 aaKnown RBP24■■□□□ 1.43
SSB-201ENST00000260956 EIF3AQ14152 1382 aaKnown RBP23.98■■□□□ 1.43
SSB-201ENST00000260956 ROBO2Q9HCK4 1378 aa23.98■■□□□ 1.43
SSB-201ENST00000260956 STK26Q9P289 416 aa23.98■■□□□ 1.43
SSB-201ENST00000260956 SBNO2Q9Y2G9 1366 aa23.97■■□□□ 1.43
SSB-201ENST00000260956 IQSEC2Q5JU85 1478 aa23.97■■□□□ 1.43
SSB-201ENST00000260956 SMG6Q86US8 1419 aaKnown RBP23.95■■□□□ 1.42
SSB-201ENST00000260956 PANK3Q9H999 370 aa23.94■■□□□ 1.42
SSB-201ENST00000260956 INSRP06213 1382 aa23.93■■□□□ 1.42
SSB-201ENST00000260956 YTHDC2Q9H6S0 1430 aaKnown RBP23.93■■□□□ 1.42
SSB-201ENST00000260956 NLRP13Q86W25 1043 aa23.93■■□□□ 1.42
SSB-201ENST00000260956 NEFLP07196 543 aa23.92■■□□□ 1.42
SSB-201ENST00000260956 FBXO41Q8TF61 875 aa23.92■■□□□ 1.42
SSB-201ENST00000260956 UBAP1LF5GYI3 381 aa23.91■■□□□ 1.42
SSB-201ENST00000260956 WAPLQ7Z5K2 1190 aa23.91■■□□□ 1.42
SSB-201ENST00000260956 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
SSB-201ENST00000260956 ILDR1Q86SU0 546 aaPredicted RBP23.9■■□□□ 1.42
SSB-201ENST00000260956 TMC1Q8TDI8 760 aa23.9■■□□□ 1.42
SSB-201ENST00000260956 TECPR2O15040 1411 aa23.89■■□□□ 1.42
SSB-201ENST00000260956 PTCH1Q13635 1447 aa23.89■■□□□ 1.42
SSB-201ENST00000260956 PLEKHH1Q9ULM0 1364 aa23.89■■□□□ 1.42
SSB-201ENST00000260956 QRICH2Q9H0J4 1663 aa23.89■■□□□ 1.41
SSB-201ENST00000260956 CNGB1Q14028 1251 aaPredicted RBP23.88■■□□□ 1.41
SSB-201ENST00000260956 NPC1L1Q9UHC9 1359 aa23.88■■□□□ 1.41
SSB-201ENST00000260956 ARHGEF28Q8N1W1 1705 aaKnown RBP23.86■■□□□ 1.41
SSB-201ENST00000260956 BLMP54132 1417 aaPredicted RBP23.86■■□□□ 1.41
SSB-201ENST00000260956 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
SSB-201ENST00000260956 NCOA3Q9Y6Q9 1424 aa23.85■■□□□ 1.41
SSB-201ENST00000260956 CDCA8Q53HL2 280 aa23.85■■□□□ 1.41
SSB-201ENST00000260956 AMER1Q5JTC6 1135 aaPredicted RBP23.84■■□□□ 1.41
SSB-201ENST00000260956 C14orf37Q86TY3 774 aa23.84■■□□□ 1.41
SSB-201ENST00000260956 C19orf44Q9H6X5 657 aa23.84■■□□□ 1.41
SSB-201ENST00000260956 MSH6P52701 1360 aa23.83■■□□□ 1.41
SSB-201ENST00000260956 PIP4K2BP78356 416 aa23.83■■□□□ 1.41
SSB-201ENST00000260956 TOM1O60784 492 aa23.82■■□□□ 1.4
SSB-201ENST00000260956 PRAM1Q96QH2 718 aa23.81■■□□□ 1.4
SSB-201ENST00000260956 RNF123Q5XPI4 1314 aa23.81■■□□□ 1.4
SSB-201ENST00000260956 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.8■■□□□ 1.4
SSB-201ENST00000260956 ADGRL3Q9HAR2 1447 aa23.8■■□□□ 1.4
SSB-201ENST00000260956 SAFB2Q14151 953 aaKnown RBP eCLIP23.8■■□□□ 1.48e-9■■■□□ 15.2
SSB-201ENST00000260956 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
SSB-201ENST00000260956 KNDC1Q76NI1 1749 aa23.8■■□□□ 1.4
SSB-201ENST00000260956 ERICH6BQ5W0A0 696 aa23.79■■□□□ 1.4
SSB-201ENST00000260956 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
SSB-201ENST00000260956 FAM135BQ49AJ0 1406 aa23.79■■□□□ 1.4
SSB-201ENST00000260956 CC2D1BQ5T0F9 858 aaKnown RBP23.79■■□□□ 1.4
SSB-201ENST00000260956 NUDCQ9Y266 331 aa23.79■■□□□ 1.4
SSB-201ENST00000260956 SLC24A1O60721 1099 aa23.78■■□□□ 1.4
SSB-201ENST00000260956 SLAIN2Q9P270 581 aa23.77■■□□□ 1.4
SSB-201ENST00000260956 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
SSB-201ENST00000260956 DLC1Q96QB1 1528 aa23.75■■□□□ 1.39
SSB-201ENST00000260956 ATF3P18847 181 aa23.75■■□□□ 1.39
SSB-201ENST00000260956 CENPJQ9HC77 1338 aaPredicted RBP23.75■■□□□ 1.39
SSB-201ENST00000260956 TULP4Q9NRJ4 1543 aa23.74■■□□□ 1.39
SSB-201ENST00000260956 CADPS2Q86UW7 1296 aa23.74■■□□□ 1.39
SSB-201ENST00000260956 TSHZ2Q9NRE2 1034 aa23.73■■□□□ 1.39
SSB-201ENST00000260956 POGKQ9P215 609 aa23.73■■□□□ 1.39
SSB-201ENST00000260956 DCCP43146 1447 aa23.72■■□□□ 1.39
SSB-201ENST00000260956 KNSTRNQ9Y448 316 aa23.71■■□□□ 1.39
SSB-201ENST00000260956 MST1RQ04912 1400 aa23.71■■□□□ 1.39
SSB-201ENST00000260956 PPP2R1AP30153 589 aa23.7■■□□□ 1.39
SSB-201ENST00000260956 MINK1Q8N4C8 1332 aaPredicted RBP23.68■■□□□ 1.38
SSB-201ENST00000260956 IRX6P78412 446 aaPredicted RBP23.68■■□□□ 1.38
SSB-201ENST00000260956 CARD14Q9BXL6 1004 aa23.68■■□□□ 1.38
SSB-201ENST00000260956 NUTM2FA1L443 756 aa23.67■■□□□ 1.38
SSB-201ENST00000260956 HSPA1LP34931 641 aa23.66■■□□□ 1.38
SSB-201ENST00000260956 CDC42BPGQ6DT37 1551 aa23.65■■□□□ 1.38
SSB-201ENST00000260956 BRINP3Q76B58 766 aa23.65■■□□□ 1.38
SSB-201ENST00000260956 C1orf167Q5SNV9 1468 aa23.65■■□□□ 1.38
SSB-201ENST00000260956 ORAI2Q96SN7 254 aa23.64■■□□□ 1.38
SSB-201ENST00000260956 ROBO1Q9Y6N7 1651 aa23.64■■□□□ 1.38
SSB-201ENST00000260956 PUS7Q96PZ0 661 aaKnown RBP23.63■■□□□ 1.37
SSB-201ENST00000260956 DDX17Q92841 729 aaKnown RBP23.61■■□□□ 1.37
SSB-201ENST00000260956 PPP4R2Q9NY27 417 aa23.61■■□□□ 1.37
SSB-201ENST00000260956 PDE3BQ13370 1112 aa23.6■■□□□ 1.37
SSB-201ENST00000260956 ADGRB2O60241 1585 aa23.59■■□□□ 1.37
SSB-201ENST00000260956 SENP3-EIF4A1A0A087X0R7 540 aa23.59■■□□□ 1.37
SSB-201ENST00000260956 WASLO00401 505 aaPredicted RBP23.59■■□□□ 1.37
SSB-201ENST00000260956 SHPRHQ149N8 1683 aa23.59■■□□□ 1.37
SSB-201ENST00000260956 PRR36Q9H6K5 1346 aa23.58■■□□□ 1.36
SSB-201ENST00000260956 NSD3Q9BZ95 1437 aa23.57■■□□□ 1.36
SSB-201ENST00000260956 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
SSB-201ENST00000260956 ESCO1Q5FWF5 840 aa23.56■■□□□ 1.36
SSB-201ENST00000260956 ADAMTS8Q9UP79 889 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms