RNA–Protein interactions for RNA: ENST00000260276.7

C11orf1-201, Transcript of chromosome 11 open reading frame 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf1, Length 2,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf1-201ENST00000260276 XRN1Q8IZH2 1706 aaKnown RBP17.42■□□□□ 0.38
C11orf1-201ENST00000260276 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.42■□□□□ 0.38
C11orf1-201ENST00000260276 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
C11orf1-201ENST00000260276 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
C11orf1-201ENST00000260276 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
C11orf1-201ENST00000260276 FAM135BQ49AJ0 1406 aa17.4■□□□□ 0.38
C11orf1-201ENST00000260276 CCDC184Q52MB2 194 aa17.4■□□□□ 0.38
C11orf1-201ENST00000260276 AMOTL2Q9Y2J4 779 aa17.4■□□□□ 0.38
C11orf1-201ENST00000260276 CHD2O14647 1828 aaKnown RBP17.39■□□□□ 0.38
C11orf1-201ENST00000260276 SLC12A5Q9H2X9 1139 aa17.39■□□□□ 0.37
C11orf1-201ENST00000260276 NPHP4O75161 1426 aaPredicted RBP17.39■□□□□ 0.37
C11orf1-201ENST00000260276 CCER2I3L3R5 266 aa17.38■□□□□ 0.37
C11orf1-201ENST00000260276 SRPK2P78362 688 aaKnown RBP17.38■□□□□ 0.37
C11orf1-201ENST00000260276 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
C11orf1-201ENST00000260276 CDK19Q9BWU1 502 aa17.38■□□□□ 0.37
C11orf1-201ENST00000260276 HSPA2P54652 639 aa17.37■□□□□ 0.37
C11orf1-201ENST00000260276 SIRT1Q96EB6 747 aa17.37■□□□□ 0.37
C11orf1-201ENST00000260276 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
C11orf1-201ENST00000260276 CC2D1BQ5T0F9 858 aaKnown RBP17.36■□□□□ 0.37
C11orf1-201ENST00000260276 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
C11orf1-201ENST00000260276 LMTK3Q96Q04 1460 aa17.35■□□□□ 0.37
C11orf1-201ENST00000260276 KCNA6P17658 529 aa17.34■□□□□ 0.37
C11orf1-201ENST00000260276 ADGRB2O60241 1585 aa17.34■□□□□ 0.37
C11orf1-201ENST00000260276 PUS7Q96PZ0 661 aaKnown RBP17.33■□□□□ 0.36
C11orf1-201ENST00000260276 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
C11orf1-201ENST00000260276 AMER1Q5JTC6 1135 aaPredicted RBP17.32■□□□□ 0.36
C11orf1-201ENST00000260276 PARD3Q8TEW0 1356 aa17.32■□□□□ 0.36
C11orf1-201ENST00000260276 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
C11orf1-201ENST00000260276 WASLO00401 505 aaPredicted RBP17.32■□□□□ 0.36
C11orf1-201ENST00000260276 KNSTRNQ9Y448 316 aa17.32■□□□□ 0.36
C11orf1-201ENST00000260276 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
C11orf1-201ENST00000260276 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
C11orf1-201ENST00000260276 NSD3Q9BZ95 1437 aa17.31■□□□□ 0.36
C11orf1-201ENST00000260276 STRCQ7RTU9 1775 aa17.3■□□□□ 0.36
C11orf1-201ENST00000260276 A0A1W2PP64 1363 aa17.29■□□□□ 0.36
C11orf1-201ENST00000260276 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
C11orf1-201ENST00000260276 NALCNQ8IZF0 1738 aa17.29■□□□□ 0.36
C11orf1-201ENST00000260276 ANKRD36BQ8N2N9 1353 aa17.29■□□□□ 0.36
C11orf1-201ENST00000260276 PRR36Q9H6K5 1346 aa17.28■□□□□ 0.36
C11orf1-201ENST00000260276 RGPD8O14715 1765 aaPredicted RBP17.28■□□□□ 0.36
C11orf1-201ENST00000260276 CABP1Q9NZU7 370 aa17.28■□□□□ 0.36
C11orf1-201ENST00000260276 ATP7BP35670 1465 aa17.28■□□□□ 0.36
C11orf1-201ENST00000260276 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
C11orf1-201ENST00000260276 RALBP1Q15311 655 aa17.27■□□□□ 0.36
C11orf1-201ENST00000260276 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.36
C11orf1-201ENST00000260276 TOPAZ1Q8N9V7 1692 aa17.27■□□□□ 0.36
C11orf1-201ENST00000260276 MRS2Q9HD23 443 aa17.27■□□□□ 0.36
C11orf1-201ENST00000260276 NWD1Q149M9 1564 aa17.27■□□□□ 0.35
C11orf1-201ENST00000260276 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
C11orf1-201ENST00000260276 MYBBP1AQ9BQG0 1328 aaKnown RBP17.26■□□□□ 0.35
C11orf1-201ENST00000260276 PPIP5K1Q6PFW1 1433 aa17.26■□□□□ 0.35
C11orf1-201ENST00000260276 NUDT16Q96DE0 195 aaKnown RBP17.26■□□□□ 0.35
C11orf1-201ENST00000260276 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
C11orf1-201ENST00000260276 AKAP12Q02952 1782 aa17.23■□□□□ 0.35
C11orf1-201ENST00000260276 NPC1L1Q9UHC9 1359 aa17.23■□□□□ 0.35
C11orf1-201ENST00000260276 ITSN1Q15811 1721 aa17.23■□□□□ 0.35
C11orf1-201ENST00000260276 FMN2Q9NZ56 1722 aa17.23■□□□□ 0.35
C11orf1-201ENST00000260276 CDC42BPGQ6DT37 1551 aa17.22■□□□□ 0.35
C11orf1-201ENST00000260276 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.35
C11orf1-201ENST00000260276 MON2Q7Z3U7 1717 aa17.21■□□□□ 0.35
C11orf1-201ENST00000260276 KIF20BQ96Q89 1820 aa17.21■□□□□ 0.35
C11orf1-201ENST00000260276 FAM9BQ8IZU0 186 aa17.2■□□□□ 0.34
C11orf1-201ENST00000260276 TERF2IPQ9NYB0 399 aa17.19■□□□□ 0.34
C11orf1-201ENST00000260276 CPSF1Q10570 1443 aaKnown RBP17.19■□□□□ 0.34
C11orf1-201ENST00000260276 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
C11orf1-201ENST00000260276 CCDC61Q9Y6R9 512 aa17.19■□□□□ 0.34
C11orf1-201ENST00000260276 ANKRD26Q9UPS8 1709 aa17.19■□□□□ 0.34
C11orf1-201ENST00000260276 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
C11orf1-201ENST00000260276 HDGFL2Q7Z4V5 671 aaPredicted RBP17.18■□□□□ 0.34
C11orf1-201ENST00000260276 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
C11orf1-201ENST00000260276 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
C11orf1-201ENST00000260276 ADGRL3Q9HAR2 1447 aa17.17■□□□□ 0.34
C11orf1-201ENST00000260276 NRKQ7Z2Y5 1582 aa17.16■□□□□ 0.34
C11orf1-201ENST00000260276 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
C11orf1-201ENST00000260276 GGNBP2Q9H3C7 697 aa17.15■□□□□ 0.34
C11orf1-201ENST00000260276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.34
C11orf1-201ENST00000260276 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.34
C11orf1-201ENST00000260276 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
C11orf1-201ENST00000260276 FYB1O15117 783 aa17.14■□□□□ 0.33
C11orf1-201ENST00000260276 PROSER2Q86WR7 435 aaPredicted RBP17.14■□□□□ 0.33
C11orf1-201ENST00000260276 PMFBP1Q8TBY8 1022 aa17.14■□□□□ 0.33
C11orf1-201ENST00000260276 ACEP12821 1306 aa17.13■□□□□ 0.33
C11orf1-201ENST00000260276 XIRP1Q702N8 1843 aaKnown RBP17.13■□□□□ 0.33
C11orf1-201ENST00000260276 EDC4Q6P2E9 1401 aaKnown RBP17.12■□□□□ 0.33
C11orf1-201ENST00000260276 NSD2O96028 1365 aa17.12■□□□□ 0.33
C11orf1-201ENST00000260276 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
C11orf1-201ENST00000260276 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
C11orf1-201ENST00000260276 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
C11orf1-201ENST00000260276 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
C11orf1-201ENST00000260276 NME9Q86XW9 330 aa17.1■□□□□ 0.33
C11orf1-201ENST00000260276 SENP3-EIF4A1A0A087X0R7 540 aa17.09■□□□□ 0.33
C11orf1-201ENST00000260276 CENPBP07199 599 aaPredicted RBP17.09■□□□□ 0.33
C11orf1-201ENST00000260276 TMEM94Q12767 1356 aa17.09■□□□□ 0.33
C11orf1-201ENST00000260276 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
C11orf1-201ENST00000260276 USP6P35125 1406 aa17.09■□□□□ 0.33
C11orf1-201ENST00000260276 ZNF335Q9H4Z2 1342 aaPredicted RBP17.08■□□□□ 0.33
C11orf1-201ENST00000260276 POLR3AO14802 1390 aaPredicted RBP17.07■□□□□ 0.32
C11orf1-201ENST00000260276 PELP1Q8IZL8 1130 aaKnown RBP17.07■□□□□ 0.32
C11orf1-201ENST00000260276 SHPRHQ149N8 1683 aa17.06■□□□□ 0.32
C11orf1-201ENST00000260276 FBLN1P23142 703 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms