RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 CABP2Q9NPB3 220 aa16.84■□□□□ 0.29
NIP7-201ENST00000254940 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.83■□□□□ 0.28
NIP7-201ENST00000254940 TMEM94Q12767 1356 aa16.82■□□□□ 0.28
NIP7-201ENST00000254940 EIF3AQ14152 1382 aaKnown RBP16.82■□□□□ 0.28
NIP7-201ENST00000254940 SRPK2P78362 688 aaKnown RBP16.81■□□□□ 0.28
NIP7-201ENST00000254940 CPS1P31327 1500 aa16.81■□□□□ 0.28
NIP7-201ENST00000254940 KNDC1Q76NI1 1749 aa16.8■□□□□ 0.28
NIP7-201ENST00000254940 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
NIP7-201ENST00000254940 PIK3R4Q99570 1358 aa16.8■□□□□ 0.28
NIP7-201ENST00000254940 CDK19Q9BWU1 502 aa16.79■□□□□ 0.28
NIP7-201ENST00000254940 TECPR2O15040 1411 aa16.78■□□□□ 0.28
NIP7-201ENST00000254940 NALCNQ8IZF0 1738 aa16.78■□□□□ 0.28
NIP7-201ENST00000254940 NWD1Q149M9 1564 aa16.78■□□□□ 0.28
NIP7-201ENST00000254940 XIRP1Q702N8 1843 aaKnown RBP16.78■□□□□ 0.28
NIP7-201ENST00000254940 SLC24A1O60721 1099 aa16.77■□□□□ 0.28
NIP7-201ENST00000254940 KIF7Q2M1P5 1343 aa16.77■□□□□ 0.28
NIP7-201ENST00000254940 TMC1Q8TDI8 760 aa16.77■□□□□ 0.27
NIP7-201ENST00000254940 LRRC7Q96NW7 1537 aa16.77■□□□□ 0.27
NIP7-201ENST00000254940 DLC1Q96QB1 1528 aa16.77■□□□□ 0.27
NIP7-201ENST00000254940 TULP4Q9NRJ4 1543 aa16.77■□□□□ 0.27
NIP7-201ENST00000254940 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
NIP7-201ENST00000254940 PTCH1Q13635 1447 aa16.76■□□□□ 0.27
NIP7-201ENST00000254940 TMF1P82094 1093 aa16.76■□□□□ 0.27
NIP7-201ENST00000254940 RGPD8O14715 1765 aaPredicted RBP16.75■□□□□ 0.27
NIP7-201ENST00000254940 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
NIP7-201ENST00000254940 WASLO00401 505 aaPredicted RBP16.74■□□□□ 0.27
NIP7-201ENST00000254940 EVC2Q86UK5 1308 aa16.73■□□□□ 0.27
NIP7-201ENST00000254940 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
NIP7-201ENST00000254940 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
NIP7-201ENST00000254940 LTBP4Q8N2S1 1624 aa16.72■□□□□ 0.27
NIP7-201ENST00000254940 NKTRP30414 1462 aaKnown RBP16.72■□□□□ 0.27
NIP7-201ENST00000254940 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
NIP7-201ENST00000254940 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
NIP7-201ENST00000254940 SLC12A5Q9H2X9 1139 aa16.72■□□□□ 0.27
NIP7-201ENST00000254940 CCDC7Q96M83 1385 aa16.72■□□□□ 0.27
NIP7-201ENST00000254940 DDX17Q92841 729 aaKnown RBP16.71■□□□□ 0.27
NIP7-201ENST00000254940 ADGRL3Q9HAR2 1447 aa16.7■□□□□ 0.26
NIP7-201ENST00000254940 ATF3P18847 181 aa16.7■□□□□ 0.26
NIP7-201ENST00000254940 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
NIP7-201ENST00000254940 NUDT16Q96DE0 195 aaKnown RBP16.7■□□□□ 0.26
NIP7-201ENST00000254940 SIRT1Q96EB6 747 aa16.7■□□□□ 0.26
NIP7-201ENST00000254940 ORAI2Q96SN7 254 aa16.7■□□□□ 0.26
NIP7-201ENST00000254940 C19orf44Q9H6X5 657 aa16.69■□□□□ 0.26
NIP7-201ENST00000254940 CABP1Q9NZU7 370 aa16.69■□□□□ 0.26
NIP7-201ENST00000254940 PIP4K2BP78356 416 aa16.68■□□□□ 0.26
NIP7-201ENST00000254940 CCDC184Q52MB2 194 aa16.68■□□□□ 0.26
NIP7-201ENST00000254940 MSH6P52701 1360 aa16.68■□□□□ 0.26
NIP7-201ENST00000254940 ESCO1Q5FWF5 840 aa16.68■□□□□ 0.26
NIP7-201ENST00000254940 USP32Q8NFA0 1604 aa16.66■□□□□ 0.26
NIP7-201ENST00000254940 ANP32CO43423 234 aa16.66■□□□□ 0.26
NIP7-201ENST00000254940 GTF3C3Q9Y5Q9 886 aa16.65■□□□□ 0.26
NIP7-201ENST00000254940 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.26
NIP7-201ENST00000254940 FMN2Q9NZ56 1722 aa16.64■□□□□ 0.25
NIP7-201ENST00000254940 PANK3Q9H999 370 aa16.64■□□□□ 0.25
NIP7-201ENST00000254940 PPIP5K1Q6PFW1 1433 aa16.63■□□□□ 0.25
NIP7-201ENST00000254940 ATP7BP35670 1465 aa16.63■□□□□ 0.25
NIP7-201ENST00000254940 MYOM1P52179 1685 aa16.62■□□□□ 0.25
NIP7-201ENST00000254940 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
NIP7-201ENST00000254940 FOXO3O43524 673 aa16.62■□□□□ 0.25
NIP7-201ENST00000254940 CERKQ8TCT0 537 aa16.62■□□□□ 0.25
NIP7-201ENST00000254940 UBAP1LF5GYI3 381 aa16.61■□□□□ 0.25
NIP7-201ENST00000254940 SLAIN2Q9P270 581 aa16.61■□□□□ 0.25
NIP7-201ENST00000254940 CDC42BPGQ6DT37 1551 aa16.61■□□□□ 0.25
NIP7-201ENST00000254940 CADPS2Q86UW7 1296 aa16.61■□□□□ 0.25
NIP7-201ENST00000254940 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
NIP7-201ENST00000254940 NGDNQ8NEJ9 315 aaKnown RBP16.6■□□□□ 0.25
NIP7-201ENST00000254940 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
NIP7-201ENST00000254940 MST1RQ04912 1400 aa16.6■□□□□ 0.25
NIP7-201ENST00000254940 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
NIP7-201ENST00000254940 ACEP12821 1306 aa16.59■□□□□ 0.25
NIP7-201ENST00000254940 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
NIP7-201ENST00000254940 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
NIP7-201ENST00000254940 C1orf167Q5SNV9 1468 aa16.59■□□□□ 0.25
NIP7-201ENST00000254940 PHF8Q9UPP1 1060 aa16.59■□□□□ 0.25
NIP7-201ENST00000254940 CARD14Q9BXL6 1004 aa16.58■□□□□ 0.25
NIP7-201ENST00000254940 PAK3O75914 559 aaPredicted RBP16.58■□□□□ 0.24
NIP7-201ENST00000254940 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
NIP7-201ENST00000254940 BRINP3Q76B58 766 aa16.57■□□□□ 0.24
NIP7-201ENST00000254940 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
NIP7-201ENST00000254940 A0A1W2PP64 1363 aa16.57■□□□□ 0.24
NIP7-201ENST00000254940 ATAD2Q6PL18 1390 aa16.57■□□□□ 0.24
NIP7-201ENST00000254940 CC2D1BQ5T0F9 858 aaKnown RBP16.55■□□□□ 0.24
NIP7-201ENST00000254940 CD163L1Q9NR16 1453 aa16.55■□□□□ 0.24
NIP7-201ENST00000254940 TOPAZ1Q8N9V7 1692 aa16.54■□□□□ 0.24
NIP7-201ENST00000254940 SOX12O15370 315 aa16.54■□□□□ 0.24
NIP7-201ENST00000254940 PSME1Q06323 249 aa16.54■□□□□ 0.24
NIP7-201ENST00000254940 TNNT2P45379 298 aaPredicted RBP16.54■□□□□ 0.24
NIP7-201ENST00000254940 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
NIP7-201ENST00000254940 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
NIP7-201ENST00000254940 NCOA3Q9Y6Q9 1424 aa16.53■□□□□ 0.24
NIP7-201ENST00000254940 HDGFL2Q7Z4V5 671 aaPredicted RBP16.53■□□□□ 0.24
NIP7-201ENST00000254940 ITSN1Q15811 1721 aa16.52■□□□□ 0.24
NIP7-201ENST00000254940 FBLN1P23142 703 aa16.52■□□□□ 0.24
NIP7-201ENST00000254940 NME9Q86XW9 330 aa16.51■□□□□ 0.23
NIP7-201ENST00000254940 TERF2IPQ9NYB0 399 aa16.51■□□□□ 0.23
NIP7-201ENST00000254940 TOM1O60784 492 aa16.51■□□□□ 0.23
NIP7-201ENST00000254940 GGNBP2Q9H3C7 697 aa16.51■□□□□ 0.23
NIP7-201ENST00000254940 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
NIP7-201ENST00000254940 ROBO1Q9Y6N7 1651 aa16.51■□□□□ 0.23
NIP7-201ENST00000254940 DCCP43146 1447 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms