RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SLC12A5Q9H2X9 1139 aa25.68■■□□□ 1.7
TRIM47-201ENST00000254816 EID1Q9Y6B2 187 aa25.68■■□□□ 1.7
TRIM47-201ENST00000254816 PLEKHH1Q9ULM0 1364 aa25.68■■□□□ 1.7
TRIM47-201ENST00000254816 THEMISQ8N1K5 641 aaPredicted RBP25.67■■□□□ 1.7
TRIM47-201ENST00000254816 ABCC11Q96J66 1382 aa25.66■■□□□ 1.7
TRIM47-201ENST00000254816 KNDC1Q76NI1 1749 aa25.66■■□□□ 1.7
TRIM47-201ENST00000254816 AMER1Q5JTC6 1135 aaPredicted RBP25.66■■□□□ 1.7
TRIM47-201ENST00000254816 CARD14Q9BXL6 1004 aa25.66■■□□□ 1.7
TRIM47-201ENST00000254816 SRPK2P78362 688 aaKnown RBP25.64■■□□□ 1.7
TRIM47-201ENST00000254816 HNRNPUQ00839 825 aaKnown RBP eCLIP25.63■■□□□ 1.69
TRIM47-201ENST00000254816 SLC26A8Q96RN1 970 aa25.63■■□□□ 1.69
TRIM47-201ENST00000254816 SUPT16HQ9Y5B9 1047 aaKnown RBP25.63■■□□□ 1.69
TRIM47-201ENST00000254816 BRD4O60885 1362 aaPredicted RBP25.61■■□□□ 1.69
TRIM47-201ENST00000254816 SETD1BQ9UPS6 1966 aaKnown RBP25.61■■□□□ 1.69
TRIM47-201ENST00000254816 ZNF142P52746 1687 aaPredicted RBP25.6■■□□□ 1.69
TRIM47-201ENST00000254816 PUS7Q96PZ0 661 aaKnown RBP25.6■■□□□ 1.69
TRIM47-201ENST00000254816 NLRP13Q86W25 1043 aa25.59■■□□□ 1.69
TRIM47-201ENST00000254816 MED14O60244 1454 aa25.59■■□□□ 1.69
TRIM47-201ENST00000254816 CDK19Q9BWU1 502 aa25.58■■□□□ 1.69
TRIM47-201ENST00000254816 CPS1P31327 1500 aa25.58■■□□□ 1.69
TRIM47-201ENST00000254816 NSD3Q9BZ95 1437 aa25.57■■□□□ 1.68
TRIM47-201ENST00000254816 TECPR2O15040 1411 aa25.57■■□□□ 1.68
TRIM47-201ENST00000254816 PNISRQ8TF01 805 aaKnown RBP25.57■■□□□ 1.68
TRIM47-201ENST00000254816 PTPRUQ92729 1446 aa25.54■■□□□ 1.68
TRIM47-201ENST00000254816 ROBO2Q9HCK4 1378 aa25.54■■□□□ 1.68
TRIM47-201ENST00000254816 NPC1L1Q9UHC9 1359 aa25.54■■□□□ 1.68
TRIM47-201ENST00000254816 FAM135BQ49AJ0 1406 aa25.53■■□□□ 1.68
TRIM47-201ENST00000254816 ATAD2Q6PL18 1390 aa25.52■■□□□ 1.68
TRIM47-201ENST00000254816 ANKRD36BQ8N2N9 1353 aa25.52■■□□□ 1.68
TRIM47-201ENST00000254816 PPP2R1AP30153 589 aa25.51■■□□□ 1.67
TRIM47-201ENST00000254816 SIRT1Q96EB6 747 aa25.5■■□□□ 1.67
TRIM47-201ENST00000254816 TBX22Q9Y458 520 aa25.5■■□□□ 1.67
TRIM47-201ENST00000254816 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.49■■□□□ 1.67
TRIM47-201ENST00000254816 A0A1W2PP64 1363 aa25.49■■□□□ 1.67
TRIM47-201ENST00000254816 DIP2AQ14689 1571 aa25.48■■□□□ 1.67
TRIM47-201ENST00000254816 USP32Q8NFA0 1604 aa25.48■■□□□ 1.67
TRIM47-201ENST00000254816 AMOTL2Q9Y2J4 779 aa25.47■■□□□ 1.67
TRIM47-201ENST00000254816 NINLQ9Y2I6 1382 aa25.47■■□□□ 1.67
TRIM47-201ENST00000254816 SENP3-EIF4A1A0A087X0R7 540 aa25.47■■□□□ 1.67
TRIM47-201ENST00000254816 WASLO00401 505 aaPredicted RBP25.47■■□□□ 1.67
TRIM47-201ENST00000254816 CD163L1Q9NR16 1453 aa25.46■■□□□ 1.67
TRIM47-201ENST00000254816 CABP1Q9NZU7 370 aa25.46■■□□□ 1.67
TRIM47-201ENST00000254816 ANKLE2Q86XL3 938 aa25.46■■□□□ 1.67
TRIM47-201ENST00000254816 CGNL1Q0VF96 1302 aa25.42■■□□□ 1.66
TRIM47-201ENST00000254816 XRN1Q8IZH2 1706 aaKnown RBP25.41■■□□□ 1.66
TRIM47-201ENST00000254816 TERF2IPQ9NYB0 399 aa25.41■■□□□ 1.66
TRIM47-201ENST00000254816 MORC1Q86VD1 984 aa25.4■■□□□ 1.66
TRIM47-201ENST00000254816 NCKAP5LQ9HCH0 1330 aa25.4■■□□□ 1.66
TRIM47-201ENST00000254816 TNNT2P45379 298 aaPredicted RBP25.39■■□□□ 1.66
TRIM47-201ENST00000254816 ADGRB2O60241 1585 aa25.38■■□□□ 1.65
TRIM47-201ENST00000254816 ZBED9Q6R2W3 1325 aa25.38■■□□□ 1.65
TRIM47-201ENST00000254816 NUDT16Q96DE0 195 aaKnown RBP25.38■■□□□ 1.65
TRIM47-201ENST00000254816 PPIP5K1Q6PFW1 1433 aa25.37■■□□□ 1.65
TRIM47-201ENST00000254816 HDGFL2Q7Z4V5 671 aaPredicted RBP25.37■■□□□ 1.65
TRIM47-201ENST00000254816 CHD2O14647 1828 aaKnown RBP25.36■■□□□ 1.65
TRIM47-201ENST00000254816 PTCH1Q13635 1447 aa25.36■■□□□ 1.65
TRIM47-201ENST00000254816 NUTM2FA1L443 756 aa25.35■■□□□ 1.65
TRIM47-201ENST00000254816 KCNA6P17658 529 aa25.35■■□□□ 1.65
TRIM47-201ENST00000254816 PRR36Q9H6K5 1346 aa25.35■■□□□ 1.65
TRIM47-201ENST00000254816 KIF20BQ96Q89 1820 aa25.34■■□□□ 1.65
TRIM47-201ENST00000254816 ATP7BP35670 1465 aa25.34■■□□□ 1.65
TRIM47-201ENST00000254816 FKBP8Q14318 412 aa25.34■■□□□ 1.65
TRIM47-201ENST00000254816 ANKRD26Q9UPS8 1709 aa25.33■■□□□ 1.65
TRIM47-201ENST00000254816 GGNBP2Q9H3C7 697 aa25.33■■□□□ 1.64
TRIM47-201ENST00000254816 ITSN1Q15811 1721 aa25.31■■□□□ 1.64
TRIM47-201ENST00000254816 NSD2O96028 1365 aa25.31■■□□□ 1.64
TRIM47-201ENST00000254816 PIK3R4Q99570 1358 aa25.31■■□□□ 1.64
TRIM47-201ENST00000254816 CCDC61Q9Y6R9 512 aa25.31■■□□□ 1.64
TRIM47-201ENST00000254816 NPHP4O75161 1426 aaPredicted RBP25.31■■□□□ 1.64
TRIM47-201ENST00000254816 RGPD8O14715 1765 aaPredicted RBP25.3■■□□□ 1.64
TRIM47-201ENST00000254816 FYB1O15117 783 aa25.3■■□□□ 1.64
TRIM47-201ENST00000254816 ADAMTS8Q9UP79 889 aa25.3■■□□□ 1.64
TRIM47-201ENST00000254816 AKAP12Q02952 1782 aa25.3■■□□□ 1.64
TRIM47-201ENST00000254816 CDC42BPGQ6DT37 1551 aa25.29■■□□□ 1.64
TRIM47-201ENST00000254816 TOPAZ1Q8N9V7 1692 aa25.29■■□□□ 1.64
TRIM47-201ENST00000254816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.29■■□□□ 1.64
TRIM47-201ENST00000254816 CPSF1Q10570 1443 aaKnown RBP25.28■■□□□ 1.64
TRIM47-201ENST00000254816 MON2Q7Z3U7 1717 aa25.28■■□□□ 1.64
TRIM47-201ENST00000254816 WDR43Q15061 677 aaKnown RBP eCLIP25.28■■□□□ 1.64
TRIM47-201ENST00000254816 SALL2Q9Y467 1007 aaPredicted RBP25.26■■□□□ 1.63
TRIM47-201ENST00000254816 BLMP54132 1417 aaPredicted RBP25.26■■□□□ 1.63
TRIM47-201ENST00000254816 RBM33Q96EV2 1170 aaKnown RBP25.24■■□□□ 1.63
TRIM47-201ENST00000254816 KDM4FA0A1W2PPD8 638 aa25.23■■□□□ 1.63
TRIM47-201ENST00000254816 MTHFSP49914 203 aa25.23■■□□□ 1.63
TRIM47-201ENST00000254816 POLR3AO14802 1390 aaPredicted RBP25.23■■□□□ 1.63
TRIM47-201ENST00000254816 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
TRIM47-201ENST00000254816 NALCNQ8IZF0 1738 aa25.22■■□□□ 1.63
TRIM47-201ENST00000254816 NKTRP30414 1462 aaKnown RBP25.22■■□□□ 1.63
TRIM47-201ENST00000254816 NEFLP07196 543 aa25.21■■□□□ 1.63
TRIM47-201ENST00000254816 EDC4Q6P2E9 1401 aaKnown RBP25.21■■□□□ 1.63
TRIM47-201ENST00000254816 INSRP06213 1382 aa25.19■■□□□ 1.62
TRIM47-201ENST00000254816 FMN2Q9NZ56 1722 aa25.18■■□□□ 1.62
TRIM47-201ENST00000254816 ACEP12821 1306 aa25.18■■□□□ 1.62
TRIM47-201ENST00000254816 NME9Q86XW9 330 aa25.17■■□□□ 1.62
TRIM47-201ENST00000254816 HSPA2P54652 639 aa25.17■■□□□ 1.62
TRIM47-201ENST00000254816 ZRANB1Q9UGI0 708 aa25.17■■□□□ 1.62
TRIM47-201ENST00000254816 CCDC146Q8IYE0 955 aa25.16■■□□□ 1.62
TRIM47-201ENST00000254816 PMFBP1Q8TBY8 1022 aa25.16■■□□□ 1.62
TRIM47-201ENST00000254816 PLEKHG3A1L390 1219 aa25.16■■□□□ 1.62
TRIM47-201ENST00000254816 NRKQ7Z2Y5 1582 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms