RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
RPA1-201ENST00000254719 SPATA31D1Q6ZQQ2 1576 aa12.31□□□□□ -0.44
RPA1-201ENST00000254719 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
RPA1-201ENST00000254719 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
RPA1-201ENST00000254719 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
RPA1-201ENST00000254719 TMF1P82094 1093 aa12.29□□□□□ -0.44
RPA1-201ENST00000254719 TMEM132EQ6IEE7 984 aa12.29□□□□□ -0.44
RPA1-201ENST00000254719 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
RPA1-201ENST00000254719 DLG5Q8TDM6 1919 aa12.28□□□□□ -0.44
RPA1-201ENST00000254719 NRKQ7Z2Y5 1582 aa12.27□□□□□ -0.45
RPA1-201ENST00000254719 IDI1Q13907 227 aa12.26□□□□□ -0.45
RPA1-201ENST00000254719 AKAP12Q02952 1782 aa12.26□□□□□ -0.45
RPA1-201ENST00000254719 MAP2P11137 1827 aaKnown RBP12.26□□□□□ -0.45
RPA1-201ENST00000254719 SLC12A5Q9H2X9 1139 aa12.25□□□□□ -0.45
RPA1-201ENST00000254719 MON2Q7Z3U7 1717 aa12.25□□□□□ -0.45
RPA1-201ENST00000254719 AGLP35573 1532 aa12.25□□□□□ -0.45
RPA1-201ENST00000254719 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
RPA1-201ENST00000254719 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
RPA1-201ENST00000254719 CDC42BPGQ6DT37 1551 aa12.25□□□□□ -0.45
RPA1-201ENST00000254719 RCAN3Q9UKA8 241 aa12.25□□□□□ -0.45
RPA1-201ENST00000254719 STAC3Q96MF2 364 aa12.25□□□□□ -0.45
RPA1-201ENST00000254719 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.25□□□□□ -0.45
RPA1-201ENST00000254719 UBR1Q8IWV7 1749 aa12.24□□□□□ -0.45
RPA1-201ENST00000254719 SLFN5Q08AF3 891 aa12.24□□□□□ -0.45
RPA1-201ENST00000254719 TOPAZ1Q8N9V7 1692 aa12.24□□□□□ -0.45
RPA1-201ENST00000254719 C3P01024 1663 aa12.24□□□□□ -0.45
RPA1-201ENST00000254719 NSD3Q9BZ95 1437 aa12.24□□□□□ -0.45
RPA1-201ENST00000254719 A2ML1A8K2U0 1454 aa12.23□□□□□ -0.45
RPA1-201ENST00000254719 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
RPA1-201ENST00000254719 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
RPA1-201ENST00000254719 NUTM2DQ5VT03 806 aaPredicted RBP12.22□□□□□ -0.45
RPA1-201ENST00000254719 TNNQ9UQP3 1299 aa12.21□□□□□ -0.45
RPA1-201ENST00000254719 A0A1W2PP64 1363 aa12.21□□□□□ -0.46
RPA1-201ENST00000254719 KANK1Q14678 1352 aa12.2□□□□□ -0.46
RPA1-201ENST00000254719 PEAK1Q9H792 1746 aa12.2□□□□□ -0.46
RPA1-201ENST00000254719 CCDC146Q8IYE0 955 aa12.2□□□□□ -0.46
RPA1-201ENST00000254719 PLEKHF1Q96S99 279 aa12.2□□□□□ -0.46
RPA1-201ENST00000254719 CRBNQ96SW2 442 aa12.2□□□□□ -0.46
RPA1-201ENST00000254719 RGPD1P0DJD0 1748 aa12.2□□□□□ -0.46
RPA1-201ENST00000254719 NALCNQ8IZF0 1738 aa12.2□□□□□ -0.46
RPA1-201ENST00000254719 RTL5Q5HYW3 569 aaPredicted RBP12.2□□□□□ -0.46
RPA1-201ENST00000254719 RGPD8O14715 1765 aaPredicted RBP12.19□□□□□ -0.46
RPA1-201ENST00000254719 PDE3BQ13370 1112 aa12.19□□□□□ -0.46
RPA1-201ENST00000254719 TRAK1Q9UPV9 953 aa12.19□□□□□ -0.46
RPA1-201ENST00000254719 DLC1Q96QB1 1528 aa12.19□□□□□ -0.46
RPA1-201ENST00000254719 GGT6Q6P531 493 aa12.18□□□□□ -0.46
RPA1-201ENST00000254719 ABCC11Q96J66 1382 aa12.18□□□□□ -0.46
RPA1-201ENST00000254719 BCAR3O75815 825 aa12.18□□□□□ -0.46
RPA1-201ENST00000254719 PNPLA6Q8IY17 1366 aa12.18□□□□□ -0.46
RPA1-201ENST00000254719 USP19O94966 1318 aa12.17□□□□□ -0.46
RPA1-201ENST00000254719 CENPJQ9HC77 1338 aaPredicted RBP12.17□□□□□ -0.46
RPA1-201ENST00000254719 CPS1P31327 1500 aa12.17□□□□□ -0.46
RPA1-201ENST00000254719 NKTRP30414 1462 aaKnown RBP12.17□□□□□ -0.46
RPA1-201ENST00000254719 YTHDC2Q9H6S0 1430 aaKnown RBP12.16□□□□□ -0.46
RPA1-201ENST00000254719 ANKRD36BQ8N2N9 1353 aa12.16□□□□□ -0.46
RPA1-201ENST00000254719 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
RPA1-201ENST00000254719 APAF1O14727 1248 aa12.15□□□□□ -0.46
RPA1-201ENST00000254719 LRRC7Q96NW7 1537 aa12.15□□□□□ -0.46
RPA1-201ENST00000254719 WWC1Q8IX03 1113 aa12.15□□□□□ -0.47
RPA1-201ENST00000254719 IGHDP01880 384 aa12.14□□□□□ -0.47
RPA1-201ENST00000254719 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
RPA1-201ENST00000254719 EIF3AQ14152 1382 aaKnown RBP12.14□□□□□ -0.47
RPA1-201ENST00000254719 RLBP1P12271 317 aa12.14□□□□□ -0.47
RPA1-201ENST00000254719 RPGRIP1LQ68CZ1 1315 aa12.14□□□□□ -0.47
RPA1-201ENST00000254719 FBLN1P23142 703 aa12.13□□□□□ -0.47
RPA1-201ENST00000254719 C8orf34Q49A92 452 aa12.13□□□□□ -0.47
RPA1-201ENST00000254719 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
RPA1-201ENST00000254719 METP08581 1390 aa12.12□□□□□ -0.47
RPA1-201ENST00000254719 RIMS1Q86UR5 1692 aaKnown RBP12.12□□□□□ -0.47
RPA1-201ENST00000254719 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
RPA1-201ENST00000254719 KNSTRNQ9Y448 316 aa12.12□□□□□ -0.47
RPA1-201ENST00000254719 TRIM35Q9UPQ4 493 aa12.11□□□□□ -0.47
RPA1-201ENST00000254719 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
RPA1-201ENST00000254719 PUS7Q96PZ0 661 aaKnown RBP12.1□□□□□ -0.47
RPA1-201ENST00000254719 FYB1O15117 783 aa12.1□□□□□ -0.47
RPA1-201ENST00000254719 TUBGCP6Q96RT7 1819 aa12.1□□□□□ -0.47
RPA1-201ENST00000254719 EIF5BO60841 1220 aaKnown RBP12.09□□□□□ -0.47
RPA1-201ENST00000254719 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
RPA1-201ENST00000254719 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
RPA1-201ENST00000254719 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.47
RPA1-201ENST00000254719 TECPR2O15040 1411 aa12.08□□□□□ -0.48
RPA1-201ENST00000254719 ADAMTS13Q76LX8 1427 aa12.08□□□□□ -0.48
RPA1-201ENST00000254719 CDCA8Q53HL2 280 aa12.07□□□□□ -0.48
RPA1-201ENST00000254719 PTPRUQ92729 1446 aa12.07□□□□□ -0.48
RPA1-201ENST00000254719 MTHFSP49914 203 aa12.07□□□□□ -0.48
RPA1-201ENST00000254719 ATP7BP35670 1465 aa12.07□□□□□ -0.48
RPA1-201ENST00000254719 CYB5RLQ6IPT4 315 aa12.07□□□□□ -0.48
RPA1-201ENST00000254719 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
RPA1-201ENST00000254719 SEC24BO95487 1268 aa12.06□□□□□ -0.48
RPA1-201ENST00000254719 PDE4AP27815 886 aa12.06□□□□□ -0.48
RPA1-201ENST00000254719 USP54Q70EL1 1684 aa12.06□□□□□ -0.48
RPA1-201ENST00000254719 FMN2Q9NZ56 1722 aa12.06□□□□□ -0.48
RPA1-201ENST00000254719 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
RPA1-201ENST00000254719 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.05□□□□□ -0.48
RPA1-201ENST00000254719 SENP3Q9H4L4 574 aaPredicted RBP12.05□□□□□ -0.48
RPA1-201ENST00000254719 SSH2Q76I76 1423 aa12.05□□□□□ -0.48
RPA1-201ENST00000254719 FAM135BQ49AJ0 1406 aa12.04□□□□□ -0.48
RPA1-201ENST00000254719 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
RPA1-201ENST00000254719 PCDHB15Q9Y5E8 787 aa12.04□□□□□ -0.48
RPA1-201ENST00000254719 PIK3C2AO00443 1686 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms