RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 CNGB1Q14028 1251 aaPredicted RBP15.47■□□□□ 0.07
CLUHP3-201ENST00000254109 PLEKHH1Q9ULM0 1364 aa15.46■□□□□ 0.07
CLUHP3-201ENST00000254109 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
CLUHP3-201ENST00000254109 CHD2O14647 1828 aaKnown RBP15.46■□□□□ 0.07
CLUHP3-201ENST00000254109 QRICH2Q9H0J4 1663 aa15.45■□□□□ 0.06
CLUHP3-201ENST00000254109 RALBP1Q15311 655 aa15.45■□□□□ 0.06
CLUHP3-201ENST00000254109 POGKQ9P215 609 aa15.45■□□□□ 0.06
CLUHP3-201ENST00000254109 ROBO2Q9HCK4 1378 aa15.45■□□□□ 0.06
CLUHP3-201ENST00000254109 KNDC1Q76NI1 1749 aa15.45■□□□□ 0.06
CLUHP3-201ENST00000254109 ZBED9Q6R2W3 1325 aa15.45■□□□□ 0.06
CLUHP3-201ENST00000254109 KCNA6P17658 529 aa15.45■□□□□ 0.06
CLUHP3-201ENST00000254109 TMF1P82094 1093 aa15.45■□□□□ 0.06
CLUHP3-201ENST00000254109 DLC1Q96QB1 1528 aa15.44■□□□□ 0.06
CLUHP3-201ENST00000254109 PIK3R4Q99570 1358 aa15.44■□□□□ 0.06
CLUHP3-201ENST00000254109 TECPR2O15040 1411 aa15.43■□□□□ 0.06
CLUHP3-201ENST00000254109 CPS1P31327 1500 aa15.43■□□□□ 0.06
CLUHP3-201ENST00000254109 XRN1Q8IZH2 1706 aaKnown RBP15.43■□□□□ 0.06
CLUHP3-201ENST00000254109 TMC1Q8TDI8 760 aa15.43■□□□□ 0.06
CLUHP3-201ENST00000254109 DISP3Q9P2K9 1392 aa15.42■□□□□ 0.06
CLUHP3-201ENST00000254109 MINK1Q8N4C8 1332 aaPredicted RBP15.42■□□□□ 0.06
CLUHP3-201ENST00000254109 MYBBP1AQ9BQG0 1328 aaKnown RBP15.42■□□□□ 0.06
CLUHP3-201ENST00000254109 RBM33Q96EV2 1170 aaKnown RBP15.41■□□□□ 0.06
CLUHP3-201ENST00000254109 SIRT1Q96EB6 747 aa15.4■□□□□ 0.06
CLUHP3-201ENST00000254109 STRCP1A6NGW2 1772 aa15.4■□□□□ 0.06
CLUHP3-201ENST00000254109 FAM135BQ49AJ0 1406 aa15.4■□□□□ 0.06
CLUHP3-201ENST00000254109 BRD4O60885 1362 aaPredicted RBP15.39■□□□□ 0.05
CLUHP3-201ENST00000254109 PTCH1Q13635 1447 aa15.38■□□□□ 0.05
CLUHP3-201ENST00000254109 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.38■□□□□ 0.05
CLUHP3-201ENST00000254109 SBNO2Q9Y2G9 1366 aa15.38■□□□□ 0.05
CLUHP3-201ENST00000254109 NWD1Q149M9 1564 aa15.37■□□□□ 0.05
CLUHP3-201ENST00000254109 CDCA8Q53HL2 280 aa15.37■□□□□ 0.05
CLUHP3-201ENST00000254109 PNISRQ8TF01 805 aaKnown RBP15.37■□□□□ 0.05
CLUHP3-201ENST00000254109 ZNF335Q9H4Z2 1342 aaPredicted RBP15.37■□□□□ 0.05
CLUHP3-201ENST00000254109 TULP4Q9NRJ4 1543 aa15.36■□□□□ 0.05
CLUHP3-201ENST00000254109 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
CLUHP3-201ENST00000254109 PER1O15534 1290 aaPredicted RBP15.35■□□□□ 0.05
CLUHP3-201ENST00000254109 PARD3Q8TEW0 1356 aa15.35■□□□□ 0.05
CLUHP3-201ENST00000254109 PROSER2Q86WR7 435 aaPredicted RBP15.34■□□□□ 0.05
CLUHP3-201ENST00000254109 PANK3Q9H999 370 aa15.34■□□□□ 0.05
CLUHP3-201ENST00000254109 CABP2Q9NPB3 220 aa15.34■□□□□ 0.05
CLUHP3-201ENST00000254109 EVC2Q86UK5 1308 aa15.34■□□□□ 0.05
CLUHP3-201ENST00000254109 SLC24A1O60721 1099 aa15.33■□□□□ 0.05
CLUHP3-201ENST00000254109 NLRP13Q86W25 1043 aa15.33■□□□□ 0.05
CLUHP3-201ENST00000254109 CDK19Q9BWU1 502 aa15.33■□□□□ 0.05
CLUHP3-201ENST00000254109 SRPK2P78362 688 aaKnown RBP15.32■□□□□ 0.04
CLUHP3-201ENST00000254109 ERICH6BQ5W0A0 696 aa15.32■□□□□ 0.04
CLUHP3-201ENST00000254109 WASLO00401 505 aaPredicted RBP15.31■□□□□ 0.04
CLUHP3-201ENST00000254109 NKTRP30414 1462 aaKnown RBP15.31■□□□□ 0.04
CLUHP3-201ENST00000254109 NALCNQ8IZF0 1738 aa15.31■□□□□ 0.04
CLUHP3-201ENST00000254109 NUTM2FA1L443 756 aa15.3■□□□□ 0.04
CLUHP3-201ENST00000254109 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
CLUHP3-201ENST00000254109 C14orf37Q86TY3 774 aa15.29■□□□□ 0.04
CLUHP3-201ENST00000254109 ADGRB2O60241 1585 aa15.29■□□□□ 0.04
CLUHP3-201ENST00000254109 TMEM94Q12767 1356 aa15.29■□□□□ 0.04
CLUHP3-201ENST00000254109 CC2D1BQ5T0F9 858 aaKnown RBP15.29■□□□□ 0.04
CLUHP3-201ENST00000254109 MYOM1P52179 1685 aa15.28■□□□□ 0.04
CLUHP3-201ENST00000254109 KNSTRNQ9Y448 316 aa15.27■□□□□ 0.04
CLUHP3-201ENST00000254109 XIRP1Q702N8 1843 aaKnown RBP15.27■□□□□ 0.03
CLUHP3-201ENST00000254109 SLC12A5Q9H2X9 1139 aa15.27■□□□□ 0.03
CLUHP3-201ENST00000254109 NUDCQ9Y266 331 aa15.27■□□□□ 0.03
CLUHP3-201ENST00000254109 ADGRL3Q9HAR2 1447 aa15.26■□□□□ 0.03
CLUHP3-201ENST00000254109 PRR36Q9H6K5 1346 aa15.26■□□□□ 0.03
CLUHP3-201ENST00000254109 LRRC7Q96NW7 1537 aa15.26■□□□□ 0.03
CLUHP3-201ENST00000254109 IRX6P78412 446 aaPredicted RBP15.25■□□□□ 0.03
CLUHP3-201ENST00000254109 PUS7Q96PZ0 661 aaKnown RBP15.25■□□□□ 0.03
CLUHP3-201ENST00000254109 RGPD8O14715 1765 aaPredicted RBP15.25■□□□□ 0.03
CLUHP3-201ENST00000254109 NUDT16Q96DE0 195 aaKnown RBP15.24■□□□□ 0.03
CLUHP3-201ENST00000254109 ATAD2Q6PL18 1390 aa15.24■□□□□ 0.03
CLUHP3-201ENST00000254109 CABP1Q9NZU7 370 aa15.23■□□□□ 0.03
CLUHP3-201ENST00000254109 FMN2Q9NZ56 1722 aa15.23■□□□□ 0.03
CLUHP3-201ENST00000254109 USP32Q8NFA0 1604 aa15.23■□□□□ 0.03
CLUHP3-201ENST00000254109 CDC42BPGQ6DT37 1551 aa15.22■□□□□ 0.03
CLUHP3-201ENST00000254109 ATP7BP35670 1465 aa15.22■□□□□ 0.03
CLUHP3-201ENST00000254109 C19orf44Q9H6X5 657 aa15.22■□□□□ 0.03
CLUHP3-201ENST00000254109 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
CLUHP3-201ENST00000254109 INSRP06213 1382 aa15.22■□□□□ 0.03
CLUHP3-201ENST00000254109 PPP4R2Q9NY27 417 aa15.22■□□□□ 0.03
CLUHP3-201ENST00000254109 CCDC61Q9Y6R9 512 aa15.21■□□□□ 0.03
CLUHP3-201ENST00000254109 NCOA3Q9Y6Q9 1424 aa15.21■□□□□ 0.03
CLUHP3-201ENST00000254109 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.02
CLUHP3-201ENST00000254109 PPIP5K1Q6PFW1 1433 aa15.2■□□□□ 0.02
CLUHP3-201ENST00000254109 CARD14Q9BXL6 1004 aa15.2■□□□□ 0.02
CLUHP3-201ENST00000254109 MSH6P52701 1360 aa15.18■□□□□ 0.02
CLUHP3-201ENST00000254109 TOPAZ1Q8N9V7 1692 aa15.18■□□□□ 0.02
CLUHP3-201ENST00000254109 CD163L1Q9NR16 1453 aa15.18■□□□□ 0.02
CLUHP3-201ENST00000254109 ATF3P18847 181 aa15.18■□□□□ 0.02
CLUHP3-201ENST00000254109 AMER1Q5JTC6 1135 aaPredicted RBP15.18■□□□□ 0.02
CLUHP3-201ENST00000254109 PMFBP1Q8TBY8 1022 aa15.18■□□□□ 0.02
CLUHP3-201ENST00000254109 NPC1L1Q9UHC9 1359 aa15.18■□□□□ 0.02
CLUHP3-201ENST00000254109 PDE3BQ13370 1112 aa15.17■□□□□ 0.02
CLUHP3-201ENST00000254109 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
CLUHP3-201ENST00000254109 A0A1W2PP64 1363 aa15.17■□□□□ 0.02
CLUHP3-201ENST00000254109 ANKRD36BQ8N2N9 1353 aa15.17■□□□□ 0.02
CLUHP3-201ENST00000254109 NINLQ9Y2I6 1382 aa15.17■□□□□ 0.02
CLUHP3-201ENST00000254109 PPP2R1AP30153 589 aa15.16■□□□□ 0.02
CLUHP3-201ENST00000254109 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
CLUHP3-201ENST00000254109 ESCO1Q5FWF5 840 aa15.15■□□□□ 0.02
CLUHP3-201ENST00000254109 ORAI2Q96SN7 254 aa15.15■□□□□ 0.02
CLUHP3-201ENST00000254109 BLMP54132 1417 aaPredicted RBP15.15■□□□□ 0.02
CLUHP3-201ENST00000254109 ITSN1Q15811 1721 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms