RNA–Protein interactions for RNA: ENST00000253408.10

GFAP-201, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 3,135 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-201ENST00000253408 STAC3Q96MF2 364 aa17.59■□□□□ 0.41
GFAP-201ENST00000253408 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.4
GFAP-201ENST00000253408 STK26Q9P289 416 aa17.58■□□□□ 0.4
GFAP-201ENST00000253408 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
GFAP-201ENST00000253408 TRPM2O94759 1503 aa17.57■□□□□ 0.4
GFAP-201ENST00000253408 ZKSCAN2Q63HK3 967 aa17.57■□□□□ 0.4
GFAP-201ENST00000253408 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
GFAP-201ENST00000253408 CABP2Q9NPB3 220 aa17.57■□□□□ 0.4
GFAP-201ENST00000253408 DZIP1LQ8IYY4 767 aaKnown RBP17.56■□□□□ 0.4
GFAP-201ENST00000253408 TBC1D32Q96NH3 1257 aa17.56■□□□□ 0.4
GFAP-201ENST00000253408 CLASP1Q7Z460 1538 aa17.56■□□□□ 0.4
GFAP-201ENST00000253408 POLR3AO14802 1390 aaPredicted RBP17.56■□□□□ 0.4
GFAP-201ENST00000253408 MYOM1P52179 1685 aa17.56■□□□□ 0.4
GFAP-201ENST00000253408 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
GFAP-201ENST00000253408 NOS1P29475 1434 aa17.56■□□□□ 0.4
GFAP-201ENST00000253408 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
GFAP-201ENST00000253408 C22orf23Q9BZE7 217 aa17.54■□□□□ 0.4
GFAP-201ENST00000253408 NINLQ9Y2I6 1382 aa17.54■□□□□ 0.4
GFAP-201ENST00000253408 ABCC1P33527 1531 aa17.54■□□□□ 0.4
GFAP-201ENST00000253408 GGNBP2Q9H3C7 697 aa17.54■□□□□ 0.4
GFAP-201ENST00000253408 SPHKAPQ2M3C7 1700 aa17.54■□□□□ 0.4
GFAP-201ENST00000253408 WDR63Q8IWG1 891 aa17.54■□□□□ 0.4
GFAP-201ENST00000253408 CFAP65Q6ZU64 1925 aaKnown RBP17.54■□□□□ 0.4
GFAP-201ENST00000253408 CHD1O14646 1710 aa17.53■□□□□ 0.4
GFAP-201ENST00000253408 SRPK2P78362 688 aaKnown RBP17.53■□□□□ 0.4
GFAP-201ENST00000253408 PTPRTO14522 1441 aa17.53■□□□□ 0.4
GFAP-201ENST00000253408 FOXD4L1Q9NU39 408 aa17.52■□□□□ 0.4
GFAP-201ENST00000253408 L1TD1Q5T7N2 865 aaKnown RBP17.52■□□□□ 0.4
GFAP-201ENST00000253408 FAM43AQ8N2R8 423 aa17.52■□□□□ 0.4
GFAP-201ENST00000253408 GOLGA6L3A6NEY3 463 aa17.51■□□□□ 0.39
GFAP-201ENST00000253408 CEP152O94986 1710 aa17.5■□□□□ 0.39
GFAP-201ENST00000253408 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
GFAP-201ENST00000253408 ANTXR1Q9H6X2 564 aa17.5■□□□□ 0.39
GFAP-201ENST00000253408 NOB1Q9ULX3 412 aaKnown RBP17.5■□□□□ 0.39
GFAP-201ENST00000253408 SSH1Q8WYL5 1049 aa17.49■□□□□ 0.39
GFAP-201ENST00000253408 PANK2Q9BZ23 570 aa17.49■□□□□ 0.39
GFAP-201ENST00000253408 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
GFAP-201ENST00000253408 HSP90AA1P07900 732 aaKnown RBP17.49■□□□□ 0.39
GFAP-201ENST00000253408 TRIM27P14373 513 aa17.49■□□□□ 0.39
GFAP-201ENST00000253408 MCM4P33991 863 aa17.48■□□□□ 0.39
GFAP-201ENST00000253408 RRAGDQ9NQL2 400 aaPredicted RBP17.48■□□□□ 0.39
GFAP-201ENST00000253408 ABCA6Q8N139 1617 aa17.48■□□□□ 0.39
GFAP-201ENST00000253408 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
GFAP-201ENST00000253408 ZFYVE16Q7Z3T8 1539 aa17.47■□□□□ 0.39
GFAP-201ENST00000253408 FANCAO15360 1455 aa17.47■□□□□ 0.39
GFAP-201ENST00000253408 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.39
GFAP-201ENST00000253408 RIPK4P57078 832 aa17.46■□□□□ 0.39
GFAP-201ENST00000253408 EVC2Q86UK5 1308 aa17.46■□□□□ 0.38
GFAP-201ENST00000253408 NAP1L5Q96NT1 182 aaPredicted RBP17.45■□□□□ 0.38
GFAP-201ENST00000253408 TRAK2O60296 914 aa17.45■□□□□ 0.38
GFAP-201ENST00000253408 NLRP1Q9C000 1473 aa17.45■□□□□ 0.38
GFAP-201ENST00000253408 ELL2O00472 640 aaPredicted RBP17.45■□□□□ 0.38
GFAP-201ENST00000253408 CHMP5Q9NZZ3 219 aa17.45■□□□□ 0.38
GFAP-201ENST00000253408 MAP3K4Q9Y6R4 1608 aa17.44■□□□□ 0.38
GFAP-201ENST00000253408 ADGRL1O94910 1474 aa17.44■□□□□ 0.38
GFAP-201ENST00000253408 RTEL1-TNFRSF6BF6WH68 1400 aa17.44■□□□□ 0.38
GFAP-201ENST00000253408 XRCC6P12956 609 aaKnown RBP eCLIP17.44■□□□□ 0.38
GFAP-201ENST00000253408 C1orf115Q9H7X2 142 aa17.44■□□□□ 0.38
GFAP-201ENST00000253408 ATP7AQ04656 1500 aa17.44■□□□□ 0.38
GFAP-201ENST00000253408 MINK1Q8N4C8 1332 aaPredicted RBP17.44■□□□□ 0.38
GFAP-201ENST00000253408 HSP90AB1P08238 724 aaKnown RBP17.44■□□□□ 0.38
GFAP-201ENST00000253408 TMPOP42166 694 aaKnown RBP17.44■□□□□ 0.38
GFAP-201ENST00000253408 DDX19BQ9UMR2 479 aa17.44■□□□□ 0.38
GFAP-201ENST00000253408 ATF7IPQ6VMQ6 1270 aa17.43■□□□□ 0.38
GFAP-201ENST00000253408 C14orf93Q9H972 538 aaKnown RBP17.43■□□□□ 0.38
GFAP-201ENST00000253408 RSPH6AQ9H0K4 717 aa17.43■□□□□ 0.38
GFAP-201ENST00000253408 FBLN1P23142 703 aa17.43■□□□□ 0.38
GFAP-201ENST00000253408 AAMPQ13685 434 aa17.43■□□□□ 0.38
GFAP-201ENST00000253408 TET3O43151 1660 aa17.42■□□□□ 0.38
GFAP-201ENST00000253408 SHROOM2Q13796 1616 aa17.41■□□□□ 0.38
GFAP-201ENST00000253408 ANKRD45Q5TZF3 282 aa17.4■□□□□ 0.38
GFAP-201ENST00000253408 CCDC27Q2M243 656 aa17.4■□□□□ 0.38
GFAP-201ENST00000253408 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
GFAP-201ENST00000253408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.37
GFAP-201ENST00000253408 ZNF518AQ6AHZ1 1483 aa17.39■□□□□ 0.37
GFAP-201ENST00000253408 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
GFAP-201ENST00000253408 KIF1BO60333 1816 aa17.38■□□□□ 0.37
GFAP-201ENST00000253408 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
GFAP-201ENST00000253408 MYOM2P54296 1465 aa17.38■□□□□ 0.37
GFAP-201ENST00000253408 VIRMAQ69YN4 1812 aaKnown RBP17.38■□□□□ 0.37
GFAP-201ENST00000253408 HMOX1P09601 288 aa17.37■□□□□ 0.37
GFAP-201ENST00000253408 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
GFAP-201ENST00000253408 PNNQ9H307 717 aaKnown RBP17.36■□□□□ 0.37
GFAP-201ENST00000253408 IQSEC2Q5JU85 1478 aa17.36■□□□□ 0.37
GFAP-201ENST00000253408 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
GFAP-201ENST00000253408 SHPRHQ149N8 1683 aa17.35■□□□□ 0.37
GFAP-201ENST00000253408 MROH2AA6NES4 1674 aa17.35■□□□□ 0.37
GFAP-201ENST00000253408 SBNO2Q9Y2G9 1366 aa17.35■□□□□ 0.37
GFAP-201ENST00000253408 HDAC1Q13547 482 aaPredicted RBP17.34■□□□□ 0.37
GFAP-201ENST00000253408 VGFO15240 615 aaPredicted RBP17.34■□□□□ 0.37
GFAP-201ENST00000253408 APBB1O00213 710 aa17.33■□□□□ 0.37
GFAP-201ENST00000253408 ANKRD36BQ8N2N9 1353 aa17.33■□□□□ 0.36
GFAP-201ENST00000253408 NPM1P06748 294 aaKnown RBP eCLIP17.33■□□□□ 0.36
GFAP-201ENST00000253408 CHD1LQ86WJ1 897 aa17.33■□□□□ 0.36
GFAP-201ENST00000253408 KIAA1210Q9ULL0 1709 aa17.32■□□□□ 0.36
GFAP-201ENST00000253408 DDX11L8A8MPP1 907 aa17.32■□□□□ 0.36
GFAP-201ENST00000253408 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
GFAP-201ENST00000253408 PRAM1Q96QH2 718 aa17.32■□□□□ 0.36
GFAP-201ENST00000253408 RBM42Q9BTD8 480 aaKnown RBP17.32■□□□□ 0.36
GFAP-201ENST00000253408 A0A1W2PP64 1363 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms