RNA–Protein interactions for RNA: ENST00000252458.6

CDC16-202, Transcript of cell division cycle 16, humanhuman

TSL 1 (best) BASIC

Gene CDC16, Length 1,991 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-202ENST00000252458 GCGRP47871 477 aa9.61□□□□□ -0.87
CDC16-202ENST00000252458 PACS2Q86VP3 889 aa9.61□□□□□ -0.87
CDC16-202ENST00000252458 HLA-CQ95604 372 aa9.61□□□□□ -0.87
CDC16-202ENST00000252458 VRTNQ9H8Y1 702 aa9.61□□□□□ -0.87
CDC16-202ENST00000252458 PPP1R3GB7ZBB8 358 aa9.6□□□□□ -0.87
CDC16-202ENST00000252458 PRR7Q8TB68 274 aa9.6□□□□□ -0.87
CDC16-202ENST00000252458 EPS8L1Q8TE68 723 aa9.6□□□□□ -0.87
CDC16-202ENST00000252458 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
CDC16-202ENST00000252458 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
CDC16-202ENST00000252458 MTMR2Q13614 643 aa9.59□□□□□ -0.87
CDC16-202ENST00000252458 ZSWIM6Q9HCJ5 1215 aa9.59□□□□□ -0.87
CDC16-202ENST00000252458 PTPREP23469 700 aa9.59□□□□□ -0.87
CDC16-202ENST00000252458 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
CDC16-202ENST00000252458 TMEM88BA6NKF7 163 aa9.58□□□□□ -0.88
CDC16-202ENST00000252458 RSPH4AQ5TD94 716 aa9.58□□□□□ -0.88
CDC16-202ENST00000252458 SND1Q7KZF4 910 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDC16-202ENST00000252458 LHX6Q9UPM6 363 aa9.58□□□□□ -0.88
CDC16-202ENST00000252458 IGSF3O75054 1194 aa9.57□□□□□ -0.88
CDC16-202ENST00000252458 ATG7O95352 703 aa9.57□□□□□ -0.88
CDC16-202ENST00000252458 LOC105371045A0A1W2PR82 267 aa9.57□□□□□ -0.88
CDC16-202ENST00000252458 CFAP99D6REC4 459 aa9.57□□□□□ -0.88
CDC16-202ENST00000252458 GPR153Q6NV75 609 aa9.56□□□□□ -0.88
CDC16-202ENST00000252458 AMOTL2Q9Y2J4 779 aa9.56□□□□□ -0.88
CDC16-202ENST00000252458 MAFBQ9Y5Q3 323 aaPredicted RBP9.56□□□□□ -0.88
CDC16-202ENST00000252458 ABCC9O60706 1549 aa9.56□□□□□ -0.88
CDC16-202ENST00000252458 PSDA5PKW4 1024 aaPredicted RBP9.55□□□□□ -0.88
CDC16-202ENST00000252458 SOX11P35716 441 aa9.55□□□□□ -0.88
CDC16-202ENST00000252458 SEMA3FQ13275 785 aa9.55□□□□□ -0.88
CDC16-202ENST00000252458 C6orf229H3BNL8 230 aa9.54□□□□□ -0.88
CDC16-202ENST00000252458 SLC10A3P09131 477 aa9.54□□□□□ -0.88
CDC16-202ENST00000252458 HOXB3P14651 431 aaPredicted RBP9.54□□□□□ -0.88
CDC16-202ENST00000252458 PROX2Q3B8N5 592 aa9.54□□□□□ -0.88
CDC16-202ENST00000252458 TBC1D9Q6ZT07 1266 aa9.53□□□□□ -0.88
CDC16-202ENST00000252458 NR6A1Q15406 480 aa9.52□□□□□ -0.89
CDC16-202ENST00000252458 MYT1LQ9UL68 1186 aa9.52□□□□□ -0.89
CDC16-202ENST00000252458 SLF2Q8IX21 1173 aa9.5□□□□□ -0.89
CDC16-202ENST00000252458 ATP9BO43861 1147 aa9.5□□□□□ -0.89
CDC16-202ENST00000252458 SWT1Q5T5J6 900 aaKnown RBP9.49□□□□□ -0.89
CDC16-202ENST00000252458 PNMA1Q8ND90 353 aa9.49□□□□□ -0.89
CDC16-202ENST00000252458 SYMPKQ92797 1274 aaKnown RBP9.49□□□□□ -0.89
CDC16-202ENST00000252458 GNEQ9Y223 722 aaKnown RBP9.48□□□□□ -0.89
CDC16-202ENST00000252458 EIF4G2P78344 907 aaKnown RBP eCLIP9.48□□□□□ -0.89
CDC16-202ENST00000252458 FUT2Q10981 343 aa9.48□□□□□ -0.89
CDC16-202ENST00000252458 GRIPAP1Q4V328 841 aa9.48□□□□□ -0.89
CDC16-202ENST00000252458 KIAA1468Q9P260 1216 aa9.48□□□□□ -0.89
CDC16-202ENST00000252458 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
CDC16-202ENST00000252458 B4GALNT3Q6L9W6 998 aa9.47□□□□□ -0.89
CDC16-202ENST00000252458 KANK4Q5T7N3 995 aaPredicted RBP9.46□□□□□ -0.89
CDC16-202ENST00000252458 KCNK17Q96T54 332 aa9.45□□□□□ -0.9
CDC16-202ENST00000252458 TMEM164Q5U3C3 297 aa9.44□□□□□ -0.9
CDC16-202ENST00000252458 STK32AQ8WU08 396 aa9.44□□□□□ -0.9
CDC16-202ENST00000252458 ZMIZ1Q9ULJ6 1067 aa9.44□□□□□ -0.9
CDC16-202ENST00000252458 PIK3CDO00329 1044 aa9.43□□□□□ -0.9
CDC16-202ENST00000252458 ELOAQ14241 798 aaKnown RBP9.43□□□□□ -0.9
CDC16-202ENST00000252458 CCER1Q8TC90 406 aaPredicted RBP9.43□□□□□ -0.9
CDC16-202ENST00000252458 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
CDC16-202ENST00000252458 SCUBE2Q9NQ36 999 aa9.43□□□□□ -0.9
CDC16-202ENST00000252458 SHROOM4Q9ULL8 1493 aa9.43□□□□□ -0.9
CDC16-202ENST00000252458 POTEHQ6S545 545 aa9.43□□□□□ -0.9
CDC16-202ENST00000252458 KCNH8Q96L42 1107 aa9.43□□□□□ -0.9
CDC16-202ENST00000252458 UNCXA6NJT0 531 aa9.42□□□□□ -0.9
CDC16-202ENST00000252458 HDGFP51858 240 aaKnown RBP9.42□□□□□ -0.9
CDC16-202ENST00000252458 ATP6V1AP38606 617 aa9.41□□□□□ -0.9
CDC16-202ENST00000252458 NR1H3Q13133 447 aa9.41□□□□□ -0.9
CDC16-202ENST00000252458 SEPT9Q9UHD8 586 aaPredicted RBP9.41□□□□□ -0.9
CDC16-202ENST00000252458 NOVA2Q9UNW9 492 aaKnown RBP9.41□□□□□ -0.9
CDC16-202ENST00000252458 CFHP08603 1231 aa9.41□□□□□ -0.9
CDC16-202ENST00000252458 FBXO45P0C2W1 286 aa9.41□□□□□ -0.9
CDC16-202ENST00000252458 SLC4A3P48751 1232 aa9.41□□□□□ -0.9
CDC16-202ENST00000252458 MAMSTRQ6ZN01 415 aa9.41□□□□□ -0.9
CDC16-202ENST00000252458 TXNDC2Q86VQ3 553 aa9.41□□□□□ -0.9
CDC16-202ENST00000252458 POTEJP0CG39 1038 aa9.4□□□□□ -0.9
CDC16-202ENST00000252458 PHLDB3Q6NSJ2 640 aa9.4□□□□□ -0.9
CDC16-202ENST00000252458 USP17L3A6NCW0 530 aa9.39□□□□□ -0.91
CDC16-202ENST00000252458 USP17L4A6NCW7 530 aa9.39□□□□□ -0.91
CDC16-202ENST00000252458 USP17L2Q6R6M4 530 aa9.39□□□□□ -0.91
CDC16-202ENST00000252458 USP17L1Q7RTZ2 530 aa9.39□□□□□ -0.91
CDC16-202ENST00000252458 ZBED2Q9BTP6 218 aa9.39□□□□□ -0.91
CDC16-202ENST00000252458 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
CDC16-202ENST00000252458 SNPHO15079 494 aa9.38□□□□□ -0.91
CDC16-202ENST00000252458 SKIP12755 728 aa9.38□□□□□ -0.91
CDC16-202ENST00000252458 RBM47A0AV96 593 aaKnown RBP9.37□□□□□ -0.91
CDC16-202ENST00000252458 DEPDC4Q8N2C3 294 aa9.37□□□□□ -0.91
CDC16-202ENST00000252458 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
CDC16-202ENST00000252458 ZBBXA8MT70 800 aa9.37□□□□□ -0.91
CDC16-202ENST00000252458 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
CDC16-202ENST00000252458 RABGEF1Q9UJ41 708 aa9.37□□□□□ -0.91
CDC16-202ENST00000252458 USP17L5A8MUK1 530 aa9.36□□□□□ -0.91
CDC16-202ENST00000252458 DESI1Q6ICB0 168 aa9.36□□□□□ -0.91
CDC16-202ENST00000252458 RNF40O75150 1001 aa9.35□□□□□ -0.91
CDC16-202ENST00000252458 SSFA2P28290 1259 aa9.35□□□□□ -0.91
CDC16-202ENST00000252458 ARID4AP29374 1257 aaPredicted RBP9.35□□□□□ -0.91
CDC16-202ENST00000252458 CRTC2Q53ET0 693 aaPredicted RBP9.35□□□□□ -0.91
CDC16-202ENST00000252458 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
CDC16-202ENST00000252458 SAMD7Q7Z3H4 446 aa9.35□□□□□ -0.91
CDC16-202ENST00000252458 LYPD8Q6UX82 237 aa9.34□□□□□ -0.91
CDC16-202ENST00000252458 USP35Q9P2H5 1018 aa9.34□□□□□ -0.91
CDC16-202ENST00000252458 MKRN1Q9UHC7 482 aaKnown RBP9.34□□□□□ -0.91
CDC16-202ENST00000252458 USP17L15C9J2P7 530 aa9.33□□□□□ -0.92
CDC16-202ENST00000252458 USP17L10C9JJH3 530 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms