RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
SIX1-201ENST00000247182 RSPH4AQ5TD94 716 aa12.39□□□□□ -0.43
SIX1-201ENST00000247182 TCP11L2Q8N4U5 519 aa12.39□□□□□ -0.43
SIX1-201ENST00000247182 MTHFSP49914 203 aa12.39□□□□□ -0.43
SIX1-201ENST00000247182 E9PSI1 815 aa12.38□□□□□ -0.43
SIX1-201ENST00000247182 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
SIX1-201ENST00000247182 ADAMTS12P58397 1594 aa12.38□□□□□ -0.43
SIX1-201ENST00000247182 PTMSP20962 102 aa12.38□□□□□ -0.43
SIX1-201ENST00000247182 CFAP53Q96M91 514 aa12.38□□□□□ -0.43
SIX1-201ENST00000247182 KIAA0556O60303 1618 aa12.38□□□□□ -0.43
SIX1-201ENST00000247182 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
SIX1-201ENST00000247182 PDIA4P13667 645 aaKnown RBP12.38□□□□□ -0.43
SIX1-201ENST00000247182 CHMP4AQ9BY43 222 aa12.38□□□□□ -0.43
SIX1-201ENST00000247182 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
SIX1-201ENST00000247182 APBB1O00213 710 aa12.37□□□□□ -0.43
SIX1-201ENST00000247182 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
SIX1-201ENST00000247182 SMC4Q9NTJ3 1288 aa12.37□□□□□ -0.43
SIX1-201ENST00000247182 SOX12O15370 315 aa12.37□□□□□ -0.43
SIX1-201ENST00000247182 ADGRF5Q8IZF2 1346 aa12.37□□□□□ -0.43
SIX1-201ENST00000247182 CABP2Q9NPB3 220 aa12.37□□□□□ -0.43
SIX1-201ENST00000247182 DRC7Q8IY82 874 aa12.36□□□□□ -0.43
SIX1-201ENST00000247182 GGNBP2Q9H3C7 697 aa12.36□□□□□ -0.43
SIX1-201ENST00000247182 AEBP1Q8IUX7 1158 aa12.36□□□□□ -0.43
SIX1-201ENST00000247182 CGNL1Q0VF96 1302 aa12.36□□□□□ -0.43
SIX1-201ENST00000247182 TARBP1Q13395 1621 aaKnown RBP12.36□□□□□ -0.43
SIX1-201ENST00000247182 NAP1L2Q9ULW6 460 aaPredicted RBP12.36□□□□□ -0.43
SIX1-201ENST00000247182 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
SIX1-201ENST00000247182 SYNJ2O15056 1496 aa12.35□□□□□ -0.43
SIX1-201ENST00000247182 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
SIX1-201ENST00000247182 FBLN1P23142 703 aa12.34□□□□□ -0.43
SIX1-201ENST00000247182 WWC1Q8IX03 1113 aa12.34□□□□□ -0.43
SIX1-201ENST00000247182 FAM177BA6PVY3 158 aa12.34□□□□□ -0.43
SIX1-201ENST00000247182 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.34□□□□□ -0.43
SIX1-201ENST00000247182 CARD14Q9BXL6 1004 aa12.34□□□□□ -0.43
SIX1-201ENST00000247182 CCDC141Q6ZP82 1450 aa12.33□□□□□ -0.44
SIX1-201ENST00000247182 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
SIX1-201ENST00000247182 KDM5CP41229 1560 aa12.32□□□□□ -0.44
SIX1-201ENST00000247182 KANK1Q14678 1352 aa12.32□□□□□ -0.44
SIX1-201ENST00000247182 MINK1Q8N4C8 1332 aaPredicted RBP12.32□□□□□ -0.44
SIX1-201ENST00000247182 RLBP1P12271 317 aa12.32□□□□□ -0.44
SIX1-201ENST00000247182 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
SIX1-201ENST00000247182 PRPF40AO75400 957 aaKnown RBP12.32□□□□□ -0.44
SIX1-201ENST00000247182 TNPO1Q92973 898 aaKnown RBP12.32□□□□□ -0.44
SIX1-201ENST00000247182 A2MP01023 1474 aa12.32□□□□□ -0.44
SIX1-201ENST00000247182 FAM135AQ9P2D6 1515 aa12.31□□□□□ -0.44
SIX1-201ENST00000247182 PCDHB15Q9Y5E8 787 aa12.31□□□□□ -0.44
SIX1-201ENST00000247182 OFD1O75665 1012 aa12.31□□□□□ -0.44
SIX1-201ENST00000247182 MLECQ14165 292 aa12.31□□□□□ -0.44
SIX1-201ENST00000247182 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
SIX1-201ENST00000247182 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
SIX1-201ENST00000247182 ZNF592Q92610 1267 aa12.31□□□□□ -0.44
SIX1-201ENST00000247182 LNPKQ9C0E8 428 aa12.31□□□□□ -0.44
SIX1-201ENST00000247182 UHRF1BP1Q6BDS2 1440 aa12.31□□□□□ -0.44
SIX1-201ENST00000247182 PBRM1Q86U86 1689 aa12.3□□□□□ -0.44
SIX1-201ENST00000247182 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
SIX1-201ENST00000247182 ERICH4A6NGS2 130 aa12.3□□□□□ -0.44
SIX1-201ENST00000247182 TSC1Q92574 1164 aa12.3□□□□□ -0.44
SIX1-201ENST00000247182 C1orf115Q9H7X2 142 aa12.3□□□□□ -0.44
SIX1-201ENST00000247182 CCDC39Q9UFE4 941 aa12.3□□□□□ -0.44
SIX1-201ENST00000247182 ERBB4Q15303 1308 aa12.3□□□□□ -0.44
SIX1-201ENST00000247182 MBD5Q9P267 1494 aa12.3□□□□□ -0.44
SIX1-201ENST00000247182 SCAPERQ9BY12 1400 aa12.29□□□□□ -0.44
SIX1-201ENST00000247182 EXOSC9Q06265 439 aaKnown RBP12.29□□□□□ -0.44
SIX1-201ENST00000247182 SYCP2Q9BX26 1530 aa12.29□□□□□ -0.44
SIX1-201ENST00000247182 RUNDC1Q96C34 613 aa12.28□□□□□ -0.44
SIX1-201ENST00000247182 KDM2BQ8NHM5 1336 aa12.28□□□□□ -0.44
SIX1-201ENST00000247182 SMAP1Q8IYB5 467 aaPredicted RBP12.28□□□□□ -0.44
SIX1-201ENST00000247182 HMOX1P09601 288 aa12.28□□□□□ -0.44
SIX1-201ENST00000247182 SASS6Q6UVJ0 657 aa12.28□□□□□ -0.44
SIX1-201ENST00000247182 EIF3AQ14152 1382 aaKnown RBP12.27□□□□□ -0.44
SIX1-201ENST00000247182 PDCL2Q8N4E4 241 aa12.27□□□□□ -0.44
SIX1-201ENST00000247182 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.44
SIX1-201ENST00000247182 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.45
SIX1-201ENST00000247182 DYNC1I1O14576 645 aa12.27□□□□□ -0.45
SIX1-201ENST00000247182 KCNJ4P48050 445 aa12.27□□□□□ -0.45
SIX1-201ENST00000247182 RARSP54136 660 aaKnown RBP12.27□□□□□ -0.45
SIX1-201ENST00000247182 ANKRD45Q5TZF3 282 aa12.27□□□□□ -0.45
SIX1-201ENST00000247182 SSFA2P28290 1259 aa12.26□□□□□ -0.45
SIX1-201ENST00000247182 TBC1D32Q96NH3 1257 aa12.26□□□□□ -0.45
SIX1-201ENST00000247182 DZIP1LQ8IYY4 767 aaKnown RBP12.26□□□□□ -0.45
SIX1-201ENST00000247182 NPHP1O15259 732 aa12.26□□□□□ -0.45
SIX1-201ENST00000247182 ZKSCAN2Q63HK3 967 aa12.26□□□□□ -0.45
SIX1-201ENST00000247182 SYAP1Q96A49 352 aaPredicted RBP12.26□□□□□ -0.45
SIX1-201ENST00000247182 KIF3AQ9Y496 699 aa12.26□□□□□ -0.45
SIX1-201ENST00000247182 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
SIX1-201ENST00000247182 CASC1Q6TDU7 716 aa12.25□□□□□ -0.45
SIX1-201ENST00000247182 GAS2L3Q86XJ1 694 aa12.25□□□□□ -0.45
SIX1-201ENST00000247182 RIPK4P57078 832 aa12.25□□□□□ -0.45
SIX1-201ENST00000247182 TRAPPC8Q9Y2L5 1435 aa12.25□□□□□ -0.45
SIX1-201ENST00000247182 ADGRL2O95490 1459 aa12.25□□□□□ -0.45
SIX1-201ENST00000247182 SYCE3A1L190 88 aa12.25□□□□□ -0.45
SIX1-201ENST00000247182 HMGN5P82970 282 aaKnown RBP12.24□□□□□ -0.45
SIX1-201ENST00000247182 ZNF830Q96NB3 372 aaPredicted RBP12.24□□□□□ -0.45
SIX1-201ENST00000247182 COL17A1Q9UMD9 1497 aaPredicted RBP12.24□□□□□ -0.45
SIX1-201ENST00000247182 CEP170Q5SW79 1584 aa12.24□□□□□ -0.45
SIX1-201ENST00000247182 NSD3Q9BZ95 1437 aa12.24□□□□□ -0.45
SIX1-201ENST00000247182 EIF4G3O43432 1585 aaKnown RBP12.24□□□□□ -0.45
SIX1-201ENST00000247182 CCDC94Q9BW85 323 aaPredicted RBP12.23□□□□□ -0.45
SIX1-201ENST00000247182 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
SIX1-201ENST00000247182 PDE3AQ14432 1141 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms