RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 PLPPR3Q6T4P5 718 aa18.6■□□□□ 0.57
SNRNP27-201ENST00000244227 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
SNRNP27-201ENST00000244227 ARHGAP23Q9P227 1491 aa18.6■□□□□ 0.57
SNRNP27-201ENST00000244227 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
SNRNP27-201ENST00000244227 SLIT1O75093 1534 aa18.59■□□□□ 0.57
SNRNP27-201ENST00000244227 WAPLQ7Z5K2 1190 aa18.59■□□□□ 0.57
SNRNP27-201ENST00000244227 PLEKHG1Q9ULL1 1385 aa18.59■□□□□ 0.57
SNRNP27-201ENST00000244227 NSD3Q9BZ95 1437 aa18.58■□□□□ 0.56
SNRNP27-201ENST00000244227 TXNDC2Q86VQ3 553 aa18.58■□□□□ 0.56
SNRNP27-201ENST00000244227 TECPR2O15040 1411 aa18.57■□□□□ 0.56
SNRNP27-201ENST00000244227 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
SNRNP27-201ENST00000244227 ANKRD36BQ8N2N9 1353 aa18.57■□□□□ 0.56
SNRNP27-201ENST00000244227 MED14O60244 1454 aa18.56■□□□□ 0.56
SNRNP27-201ENST00000244227 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
SNRNP27-201ENST00000244227 ADAMTSL3P82987 1691 aa18.55■□□□□ 0.56
SNRNP27-201ENST00000244227 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
SNRNP27-201ENST00000244227 ATAD2Q6PL18 1390 aa18.55■□□□□ 0.56
SNRNP27-201ENST00000244227 NINLQ9Y2I6 1382 aa18.55■□□□□ 0.56
SNRNP27-201ENST00000244227 RIMS1Q86UR5 1692 aaKnown RBP18.54■□□□□ 0.56
SNRNP27-201ENST00000244227 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
SNRNP27-201ENST00000244227 USP32Q8NFA0 1604 aa18.54■□□□□ 0.56
SNRNP27-201ENST00000244227 THEMISQ8N1K5 641 aaPredicted RBP18.53■□□□□ 0.56
SNRNP27-201ENST00000244227 BCANQ96GW7 911 aa18.53■□□□□ 0.56
SNRNP27-201ENST00000244227 FAM135BQ49AJ0 1406 aa18.53■□□□□ 0.56
SNRNP27-201ENST00000244227 INSRP06213 1382 aa18.53■□□□□ 0.56
SNRNP27-201ENST00000244227 EID1Q9Y6B2 187 aa18.53■□□□□ 0.56
SNRNP27-201ENST00000244227 CPS1P31327 1500 aa18.52■□□□□ 0.56
SNRNP27-201ENST00000244227 CD163L1Q9NR16 1453 aa18.52■□□□□ 0.55
SNRNP27-201ENST00000244227 A0A1W2PP64 1363 aa18.51■□□□□ 0.55
SNRNP27-201ENST00000244227 ROBO2Q9HCK4 1378 aa18.49■□□□□ 0.55
SNRNP27-201ENST00000244227 CEP170BQ9Y4F5 1589 aaPredicted RBP18.49■□□□□ 0.55
SNRNP27-201ENST00000244227 SLC26A8Q96RN1 970 aa18.49■□□□□ 0.55
SNRNP27-201ENST00000244227 BLMP54132 1417 aaPredicted RBP18.48■□□□□ 0.55
SNRNP27-201ENST00000244227 PTPRUQ92729 1446 aa18.48■□□□□ 0.55
SNRNP27-201ENST00000244227 CGNL1Q0VF96 1302 aa18.48■□□□□ 0.55
SNRNP27-201ENST00000244227 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
SNRNP27-201ENST00000244227 TBX22Q9Y458 520 aa18.48■□□□□ 0.55
SNRNP27-201ENST00000244227 SUPT16HQ9Y5B9 1047 aaKnown RBP18.48■□□□□ 0.55
SNRNP27-201ENST00000244227 WASLO00401 505 aaPredicted RBP18.47■□□□□ 0.55
SNRNP27-201ENST00000244227 CABP1Q9NZU7 370 aa18.46■□□□□ 0.55
SNRNP27-201ENST00000244227 ADAMTS8Q9UP79 889 aa18.46■□□□□ 0.55
SNRNP27-201ENST00000244227 MORC1Q86VD1 984 aa18.46■□□□□ 0.55
SNRNP27-201ENST00000244227 NSD2O96028 1365 aa18.46■□□□□ 0.55
SNRNP27-201ENST00000244227 TERF2IPQ9NYB0 399 aa18.45■□□□□ 0.54
SNRNP27-201ENST00000244227 SMG6Q86US8 1419 aaKnown RBP18.43■□□□□ 0.54
SNRNP27-201ENST00000244227 POLR3AO14802 1390 aaPredicted RBP18.42■□□□□ 0.54
SNRNP27-201ENST00000244227 DIP2AQ14689 1571 aa18.41■□□□□ 0.54
SNRNP27-201ENST00000244227 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.41■□□□□ 0.54
SNRNP27-201ENST00000244227 ZNF142P52746 1687 aaPredicted RBP18.41■□□□□ 0.54
SNRNP27-201ENST00000244227 HDGFL2Q7Z4V5 671 aaPredicted RBP18.41■□□□□ 0.54
SNRNP27-201ENST00000244227 AMOTL2Q9Y2J4 779 aa18.41■□□□□ 0.54
SNRNP27-201ENST00000244227 ATP7BP35670 1465 aa18.41■□□□□ 0.54
SNRNP27-201ENST00000244227 FYB1O15117 783 aa18.4■□□□□ 0.54
SNRNP27-201ENST00000244227 FKBP8Q14318 412 aa18.4■□□□□ 0.54
SNRNP27-201ENST00000244227 WDR43Q15061 677 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNRNP27-201ENST00000244227 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
SNRNP27-201ENST00000244227 TNNT2P45379 298 aaPredicted RBP18.39■□□□□ 0.54
SNRNP27-201ENST00000244227 NUDT16Q96DE0 195 aaKnown RBP18.39■□□□□ 0.54
SNRNP27-201ENST00000244227 NUDCQ9Y266 331 aa18.39■□□□□ 0.54
SNRNP27-201ENST00000244227 CPSF1Q10570 1443 aaKnown RBP18.38■□□□□ 0.53
SNRNP27-201ENST00000244227 PRR36Q9H6K5 1346 aa18.38■□□□□ 0.53
SNRNP27-201ENST00000244227 PTCH1Q13635 1447 aa18.38■□□□□ 0.53
SNRNP27-201ENST00000244227 PPIP5K1Q6PFW1 1433 aa18.38■□□□□ 0.53
SNRNP27-201ENST00000244227 GGNBP2Q9H3C7 697 aa18.37■□□□□ 0.53
SNRNP27-201ENST00000244227 SALL2Q9Y467 1007 aaPredicted RBP18.37■□□□□ 0.53
SNRNP27-201ENST00000244227 CCDC61Q9Y6R9 512 aa18.37■□□□□ 0.53
SNRNP27-201ENST00000244227 NCKAP5LQ9HCH0 1330 aa18.37■□□□□ 0.53
SNRNP27-201ENST00000244227 SETD1BQ9UPS6 1966 aaKnown RBP18.37■□□□□ 0.53
SNRNP27-201ENST00000244227 MTHFSP49914 203 aa18.36■□□□□ 0.53
SNRNP27-201ENST00000244227 ANKLE2Q86XL3 938 aa18.35■□□□□ 0.53
SNRNP27-201ENST00000244227 XRN1Q8IZH2 1706 aaKnown RBP18.35■□□□□ 0.53
SNRNP27-201ENST00000244227 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
SNRNP27-201ENST00000244227 NEFLP07196 543 aa18.35■□□□□ 0.53
SNRNP27-201ENST00000244227 PDE3BQ13370 1112 aa18.34■□□□□ 0.53
SNRNP27-201ENST00000244227 ANKRD26Q9UPS8 1709 aa18.34■□□□□ 0.53
SNRNP27-201ENST00000244227 SHPRHQ149N8 1683 aa18.34■□□□□ 0.53
SNRNP27-201ENST00000244227 CDC42BPGQ6DT37 1551 aa18.34■□□□□ 0.53
SNRNP27-201ENST00000244227 KCNA6P17658 529 aa18.31■□□□□ 0.52
SNRNP27-201ENST00000244227 EDC4Q6P2E9 1401 aaKnown RBP18.31■□□□□ 0.52
SNRNP27-201ENST00000244227 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
SNRNP27-201ENST00000244227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNRNP27-201ENST00000244227 CCDC146Q8IYE0 955 aa18.3■□□□□ 0.52
SNRNP27-201ENST00000244227 CDCA7LQ96GN5 454 aa18.3■□□□□ 0.52
SNRNP27-201ENST00000244227 PLEKHG3A1L390 1219 aa18.29■□□□□ 0.52
SNRNP27-201ENST00000244227 TOPAZ1Q8N9V7 1692 aa18.29■□□□□ 0.52
SNRNP27-201ENST00000244227 ZNF521Q96K83 1311 aa18.29■□□□□ 0.52
SNRNP27-201ENST00000244227 CFAP53Q96M91 514 aa18.28■□□□□ 0.52
SNRNP27-201ENST00000244227 MON2Q7Z3U7 1717 aa18.28■□□□□ 0.52
SNRNP27-201ENST00000244227 AKAP12Q02952 1782 aa18.28■□□□□ 0.52
SNRNP27-201ENST00000244227 ZNF692Q9BU19 519 aaPredicted RBP18.28■□□□□ 0.52
SNRNP27-201ENST00000244227 RNF123Q5XPI4 1314 aa18.27■□□□□ 0.52
SNRNP27-201ENST00000244227 APAF1O14727 1248 aa18.26■□□□□ 0.51
SNRNP27-201ENST00000244227 COL3A1P02461 1466 aaPredicted RBP18.26■□□□□ 0.51
SNRNP27-201ENST00000244227 NKTRP30414 1462 aaKnown RBP18.26■□□□□ 0.51
SNRNP27-201ENST00000244227 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
SNRNP27-201ENST00000244227 IRX6P78412 446 aaPredicted RBP18.26■□□□□ 0.51
SNRNP27-201ENST00000244227 NME9Q86XW9 330 aa18.26■□□□□ 0.51
SNRNP27-201ENST00000244227 CHD2O14647 1828 aaKnown RBP18.25■□□□□ 0.51
SNRNP27-201ENST00000244227 ACEP12821 1306 aa18.25■□□□□ 0.51
SNRNP27-201ENST00000244227 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms