RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 TPM2P07951 284 aa11.55□□□□□ -0.56
SRSF6-201ENST00000244020 EIF2AK4Q9P2K8 1649 aaKnown RBP11.54□□□□□ -0.56
SRSF6-201ENST00000244020 PTMSP20962 102 aa11.54□□□□□ -0.56
SRSF6-201ENST00000244020 KIAA1211Q6ZU35 1233 aa11.54□□□□□ -0.56
SRSF6-201ENST00000244020 PLA2R1Q13018 1463 aa11.54□□□□□ -0.56
SRSF6-201ENST00000244020 WDR63Q8IWG1 891 aa11.54□□□□□ -0.56
SRSF6-201ENST00000244020 DDX49Q9Y6V7 483 aaKnown RBP11.54□□□□□ -0.56
SRSF6-201ENST00000244020 NASPP49321 788 aaPredicted RBP11.54□□□□□ -0.56
SRSF6-201ENST00000244020 LNPKQ9C0E8 428 aa11.54□□□□□ -0.56
SRSF6-201ENST00000244020 U2SURPO15042 1029 aaKnown RBP11.53□□□□□ -0.56
SRSF6-201ENST00000244020 DDX19BQ9UMR2 479 aa11.53□□□□□ -0.56
SRSF6-201ENST00000244020 CHAF1AQ13111 956 aaPredicted RBP11.53□□□□□ -0.56
SRSF6-201ENST00000244020 CFAP70Q5T0N1 1121 aa11.53□□□□□ -0.56
SRSF6-201ENST00000244020 CARD14Q9BXL6 1004 aa11.52□□□□□ -0.56
SRSF6-201ENST00000244020 ERCC6Q03468 1493 aa11.52□□□□□ -0.56
SRSF6-201ENST00000244020 MTHFSP49914 203 aa11.52□□□□□ -0.57
SRSF6-201ENST00000244020 TSR2Q969E8 191 aaKnown RBP11.52□□□□□ -0.57
SRSF6-201ENST00000244020 ATP10BO94823 1461 aa11.52□□□□□ -0.57
SRSF6-201ENST00000244020 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.57
SRSF6-201ENST00000244020 ERBB4Q15303 1308 aa11.51□□□□□ -0.57
SRSF6-201ENST00000244020 RBM10P98175 930 aaKnown RBP11.51□□□□□ -0.57
SRSF6-201ENST00000244020 CCDC173Q0VFZ6 552 aa11.51□□□□□ -0.57
SRSF6-201ENST00000244020 NLRP1Q9C000 1473 aa11.51□□□□□ -0.57
SRSF6-201ENST00000244020 PDCL3Q9H2J4 239 aa11.51□□□□□ -0.57
SRSF6-201ENST00000244020 NPC1L1Q9UHC9 1359 aa11.51□□□□□ -0.57
SRSF6-201ENST00000244020 GAS2L3Q86XJ1 694 aa11.5□□□□□ -0.57
SRSF6-201ENST00000244020 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
SRSF6-201ENST00000244020 CDC42BPAQ5VT25 1732 aa11.5□□□□□ -0.57
SRSF6-201ENST00000244020 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
SRSF6-201ENST00000244020 ABCC10Q5T3U5 1492 aa11.5□□□□□ -0.57
SRSF6-201ENST00000244020 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
SRSF6-201ENST00000244020 EXOSC9Q06265 439 aaKnown RBP11.5□□□□□ -0.57
SRSF6-201ENST00000244020 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
SRSF6-201ENST00000244020 MRC2Q9UBG0 1479 aa11.5□□□□□ -0.57
SRSF6-201ENST00000244020 STAC3Q96MF2 364 aa11.49□□□□□ -0.57
SRSF6-201ENST00000244020 CALD1Q05682 793 aaKnown RBP11.49□□□□□ -0.57
SRSF6-201ENST00000244020 ANKRD45Q5TZF3 282 aa11.49□□□□□ -0.57
SRSF6-201ENST00000244020 IPO8O15397 1037 aaKnown RBP11.49□□□□□ -0.57
SRSF6-201ENST00000244020 ARHGAP5Q13017 1502 aa11.49□□□□□ -0.57
SRSF6-201ENST00000244020 ZSCAN30Q86W11 494 aa11.49□□□□□ -0.57
SRSF6-201ENST00000244020 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
SRSF6-201ENST00000244020 TRAK1Q9UPV9 953 aa11.49□□□□□ -0.57
SRSF6-201ENST00000244020 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.48□□□□□ -0.57
SRSF6-201ENST00000244020 R3HCC1Q9Y3T6 440 aaKnown RBP11.48□□□□□ -0.57
SRSF6-201ENST00000244020 ZMYM3Q14202 1370 aa11.48□□□□□ -0.57
SRSF6-201ENST00000244020 ADCY10Q96PN6 1610 aa11.48□□□□□ -0.57
SRSF6-201ENST00000244020 TRIM27P14373 513 aa11.48□□□□□ -0.57
SRSF6-201ENST00000244020 NOB1Q9ULX3 412 aaKnown RBP11.48□□□□□ -0.57
SRSF6-201ENST00000244020 SCAPERQ9BY12 1400 aa11.48□□□□□ -0.57
SRSF6-201ENST00000244020 SYNJ2O15056 1496 aa11.47□□□□□ -0.57
SRSF6-201ENST00000244020 ATF7IPQ6VMQ6 1270 aa11.47□□□□□ -0.57
SRSF6-201ENST00000244020 POLR3AO14802 1390 aaPredicted RBP11.47□□□□□ -0.57
SRSF6-201ENST00000244020 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
SRSF6-201ENST00000244020 HDAC1Q13547 482 aaPredicted RBP11.46□□□□□ -0.57
SRSF6-201ENST00000244020 SMC5Q8IY18 1101 aa11.46□□□□□ -0.57
SRSF6-201ENST00000244020 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
SRSF6-201ENST00000244020 RAB3GAP1Q15042 981 aa11.46□□□□□ -0.57
SRSF6-201ENST00000244020 MCTP1Q6DN14 999 aa11.46□□□□□ -0.57
SRSF6-201ENST00000244020 SSH1Q8WYL5 1049 aa11.46□□□□□ -0.57
SRSF6-201ENST00000244020 SNX21Q969T3 373 aa11.46□□□□□ -0.57
SRSF6-201ENST00000244020 SSFA2P28290 1259 aa11.46□□□□□ -0.58
SRSF6-201ENST00000244020 TMEM57Q8N5G2 664 aa11.46□□□□□ -0.58
SRSF6-201ENST00000244020 SYNMO15061 1565 aa11.46□□□□□ -0.58
SRSF6-201ENST00000244020 LAMC1P11047 1609 aa11.46□□□□□ -0.58
SRSF6-201ENST00000244020 CHD1LQ86WJ1 897 aa11.45□□□□□ -0.58
SRSF6-201ENST00000244020 SYCP2Q9BX26 1530 aa11.45□□□□□ -0.58
SRSF6-201ENST00000244020 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
SRSF6-201ENST00000244020 NSD3Q9BZ95 1437 aa11.45□□□□□ -0.58
SRSF6-201ENST00000244020 CAVIN1Q6NZI2 390 aaKnown RBP11.45□□□□□ -0.58
SRSF6-201ENST00000244020 ZNF771Q7L3S4 317 aaPredicted RBP11.45□□□□□ -0.58
SRSF6-201ENST00000244020 EFCAB2Q5VUJ9 269 aa11.45□□□□□ -0.58
SRSF6-201ENST00000244020 RBM25P49756 843 aaKnown RBP11.44□□□□□ -0.58
SRSF6-201ENST00000244020 VIRMAQ69YN4 1812 aaKnown RBP11.44□□□□□ -0.58
SRSF6-201ENST00000244020 PDE4CQ08493 712 aa11.44□□□□□ -0.58
SRSF6-201ENST00000244020 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
SRSF6-201ENST00000244020 ZNF692Q9BU19 519 aaPredicted RBP11.44□□□□□ -0.58
SRSF6-201ENST00000244020 SPAG9O60271 1321 aaKnown RBP11.43□□□□□ -0.58
SRSF6-201ENST00000244020 APPP05067 770 aa11.43□□□□□ -0.58
SRSF6-201ENST00000244020 KANK1Q14678 1352 aa11.43□□□□□ -0.58
SRSF6-201ENST00000244020 KIF3BO15066 747 aa11.43□□□□□ -0.58
SRSF6-201ENST00000244020 CT47B1P0C2W7 299 aaPredicted RBP11.43□□□□□ -0.58
SRSF6-201ENST00000244020 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
SRSF6-201ENST00000244020 SENP3Q9H4L4 574 aaPredicted RBP11.43□□□□□ -0.58
SRSF6-201ENST00000244020 KIAA2012Q0VF49 1180 aa11.42□□□□□ -0.58
SRSF6-201ENST00000244020 OFD1O75665 1012 aa11.42□□□□□ -0.58
SRSF6-201ENST00000244020 NUCB1Q02818 461 aa11.42□□□□□ -0.58
SRSF6-201ENST00000244020 ADGRF5Q8IZF2 1346 aa11.42□□□□□ -0.58
SRSF6-201ENST00000244020 KIF16BQ96L93 1317 aa11.42□□□□□ -0.58
SRSF6-201ENST00000244020 BAG4O95429 457 aaKnown RBP11.41□□□□□ -0.58
SRSF6-201ENST00000244020 RIPK4P57078 832 aa11.41□□□□□ -0.58
SRSF6-201ENST00000244020 KLHL40Q2TBA0 621 aa11.41□□□□□ -0.58
SRSF6-201ENST00000244020 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
SRSF6-201ENST00000244020 MYO5CQ9NQX4 1742 aa11.41□□□□□ -0.58
SRSF6-201ENST00000244020 CHMP4BQ9H444 224 aaKnown RBP11.41□□□□□ -0.58
SRSF6-201ENST00000244020 SAMD9LQ8IVG5 1584 aa11.41□□□□□ -0.58
SRSF6-201ENST00000244020 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
SRSF6-201ENST00000244020 SAFB2Q14151 953 aaKnown RBP eCLIP11.41□□□□□ -0.58
SRSF6-201ENST00000244020 GAS2L2Q8NHY3 880 aa11.41□□□□□ -0.58
SRSF6-201ENST00000244020 BMP2KLQ5H9B9 411 aa11.4□□□□□ -0.58
SRSF6-201ENST00000244020 NUCB2P80303 420 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms