RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 ZNHIT6Q9NWK9 470 aaKnown RBP10.82□□□□□ -0.68
LRP1-201ENST00000243077 ANKRD18AQ8IVF6 992 aa10.82□□□□□ -0.68
LRP1-201ENST00000243077 PRM3Q9NNZ6 103 aa10.82□□□□□ -0.68
LRP1-201ENST00000243077 SDF4Q9BRK5 362 aa10.81□□□□□ -0.68
LRP1-201ENST00000243077 TXLNAP40222 546 aa10.81□□□□□ -0.68
LRP1-201ENST00000243077 LEKR1Q6ZMV7 388 aa10.81□□□□□ -0.68
LRP1-201ENST00000243077 WDR63Q8IWG1 891 aa10.81□□□□□ -0.68
LRP1-201ENST00000243077 ANO2Q9NQ90 1003 aa10.81□□□□□ -0.68
LRP1-201ENST00000243077 RALYLQ86SE5 291 aaKnown RBP10.81□□□□□ -0.68
LRP1-201ENST00000243077 KINO60870 393 aaKnown RBP10.81□□□□□ -0.68
LRP1-201ENST00000243077 PCMTD1Q96MG8 357 aaPredicted RBP10.81□□□□□ -0.68
LRP1-201ENST00000243077 TRIM34Q9BYJ4 488 aa10.81□□□□□ -0.68
LRP1-201ENST00000243077 DHX57Q6P158 1386 aaKnown RBP10.81□□□□□ -0.68
LRP1-201ENST00000243077 MYOM3Q5VTT5 1437 aa10.81□□□□□ -0.68
LRP1-201ENST00000243077 TOMM22Q9NS69 142 aa10.81□□□□□ -0.68
LRP1-201ENST00000243077 FAM107BQ9H098 131 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 EIF3JO75822 258 aaKnown RBP10.8□□□□□ -0.68
LRP1-201ENST00000243077 TTC5Q8N0Z6 440 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 EPS15P42566 896 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 TSPYL1Q9H0U9 437 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 GOLGA6L10A6NI86 522 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 TRAK2O60296 914 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 CCDC192P0DO97 292 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 CFAP45Q9UL16 551 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 MCM3P25205 808 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 CBFA2T2O43439 604 aa10.8□□□□□ -0.68
LRP1-201ENST00000243077 RIPK4P57078 832 aa10.79□□□□□ -0.68
LRP1-201ENST00000243077 SAFB2Q14151 953 aaKnown RBP eCLIP10.79□□□□□ -0.68
LRP1-201ENST00000243077 CCDC146Q8IYE0 955 aa10.79□□□□□ -0.68
LRP1-201ENST00000243077 NFKBIBQ15653 356 aa10.79□□□□□ -0.68
LRP1-201ENST00000243077 VPS37DQ86XT2 251 aa10.79□□□□□ -0.68
LRP1-201ENST00000243077 ODF2Q5BJF6 829 aa10.79□□□□□ -0.68
LRP1-201ENST00000243077 CLASRPQ8N2M8 674 aaKnown RBP10.79□□□□□ -0.68
LRP1-201ENST00000243077 SOX12O15370 315 aa10.79□□□□□ -0.68
LRP1-201ENST00000243077 TSPY26PQ9H489 355 aa10.78□□□□□ -0.68
LRP1-201ENST00000243077 CCDC30Q5VVM6 783 aa10.78□□□□□ -0.68
LRP1-201ENST00000243077 GAS2L2Q8NHY3 880 aa10.78□□□□□ -0.68
LRP1-201ENST00000243077 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
LRP1-201ENST00000243077 STIM1Q13586 685 aa10.78□□□□□ -0.68
LRP1-201ENST00000243077 VPS53Q5VIR6 699 aa10.78□□□□□ -0.68
LRP1-201ENST00000243077 CADPSQ9ULU8 1353 aa10.78□□□□□ -0.68
LRP1-201ENST00000243077 FOXD1Q16676 465 aa10.78□□□□□ -0.68
LRP1-201ENST00000243077 PKNOX2Q96KN3 472 aa10.78□□□□□ -0.68
LRP1-201ENST00000243077 WDR33Q9C0J8 1336 aaKnown RBP10.77□□□□□ -0.68
LRP1-201ENST00000243077 CAVIN2O95810 425 aa10.77□□□□□ -0.68
LRP1-201ENST00000243077 INCENPQ9NQS7 918 aa10.77□□□□□ -0.68
LRP1-201ENST00000243077 NFXL1Q6ZNB6 911 aa10.77□□□□□ -0.68
LRP1-201ENST00000243077 ERLIN1O75477 346 aa10.77□□□□□ -0.69
LRP1-201ENST00000243077 TBC1D2BQ9UPU7 963 aa10.77□□□□□ -0.69
LRP1-201ENST00000243077 MAGEC2Q9UBF1 373 aaPredicted RBP10.77□□□□□ -0.69
LRP1-201ENST00000243077 OFD1O75665 1012 aa10.77□□□□□ -0.69
LRP1-201ENST00000243077 APAF1O14727 1248 aa10.77□□□□□ -0.69
LRP1-201ENST00000243077 APPP05067 770 aa10.77□□□□□ -0.69
LRP1-201ENST00000243077 CTDP1Q9Y5B0 961 aaPredicted RBP10.76□□□□□ -0.69
LRP1-201ENST00000243077 R3HCC1Q9Y3T6 440 aaKnown RBP10.76□□□□□ -0.69
LRP1-201ENST00000243077 TOP2AP11388 1531 aaKnown RBP10.76□□□□□ -0.69
LRP1-201ENST00000243077 COG6Q9Y2V7 657 aa10.76□□□□□ -0.69
LRP1-201ENST00000243077 CT47A1Q5JQC4 288 aaPredicted RBP10.76□□□□□ -0.69
LRP1-201ENST00000243077 EVA1CP58658 441 aa10.76□□□□□ -0.69
LRP1-201ENST00000243077 KRT32Q14532 448 aa10.76□□□□□ -0.69
LRP1-201ENST00000243077 CCT4P50991 539 aaKnown RBP10.76□□□□□ -0.69
LRP1-201ENST00000243077 NAP1L1P55209 391 aaKnown RBP10.76□□□□□ -0.69
LRP1-201ENST00000243077 EXOC6Q8TAG9 804 aa10.76□□□□□ -0.69
LRP1-201ENST00000243077 MCM5P33992 734 aa10.76□□□□□ -0.69
LRP1-201ENST00000243077 H0YHG0 523 aa10.75□□□□□ -0.69
LRP1-201ENST00000243077 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.695e-6■■□□□ 13.2
LRP1-201ENST00000243077 TRIM5Q9C035 493 aa10.75□□□□□ -0.69
LRP1-201ENST00000243077 TUBB4BP68371 445 aa10.75□□□□□ -0.69
LRP1-201ENST00000243077 DEF6Q9H4E7 631 aa10.75□□□□□ -0.69
LRP1-201ENST00000243077 CDKL5O76039 1030 aa10.75□□□□□ -0.69
LRP1-201ENST00000243077 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
LRP1-201ENST00000243077 GBP3Q9H0R5 595 aa10.75□□□□□ -0.69
LRP1-201ENST00000243077 HFM1A2PYH4 1435 aa10.75□□□□□ -0.69
LRP1-201ENST00000243077 CCDC43Q96MW1 224 aaKnown RBP10.75□□□□□ -0.69
LRP1-201ENST00000243077 SENP3-EIF4A1A0A087X0R7 540 aa10.74□□□□□ -0.69
LRP1-201ENST00000243077 CTNNA3Q9UI47 895 aa10.74□□□□□ -0.69
LRP1-201ENST00000243077 TRAK1Q9UPV9 953 aa10.74□□□□□ -0.69
LRP1-201ENST00000243077 GNL3LQ9NVN8 582 aaKnown RBP10.74□□□□□ -0.69
LRP1-201ENST00000243077 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.74□□□□□ -0.69
LRP1-201ENST00000243077 SMTNL1A8MU46 457 aa10.74□□□□□ -0.69
LRP1-201ENST00000243077 UBTFL1P0CB47 393 aaPredicted RBP10.74□□□□□ -0.69
LRP1-201ENST00000243077 WWC2Q6AWC2 1192 aa10.73□□□□□ -0.69
LRP1-201ENST00000243077 ZNF330Q9Y3S2 320 aaPredicted RBP10.73□□□□□ -0.69
LRP1-201ENST00000243077 POLR3GO15318 223 aaPredicted RBP10.73□□□□□ -0.69
LRP1-201ENST00000243077 GNAI2P04899 355 aa10.73□□□□□ -0.69
LRP1-201ENST00000243077 PPFIBP1Q86W92 1011 aa10.73□□□□□ -0.69
LRP1-201ENST00000243077 CTAGE5O15320 804 aa10.73□□□□□ -0.69
LRP1-201ENST00000243077 KIAA0754O94854 1291 aa10.73□□□□□ -0.69
LRP1-201ENST00000243077 CUX1P39880 1505 aa10.73□□□□□ -0.69
LRP1-201ENST00000243077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.73□□□□□ -0.69
LRP1-201ENST00000243077 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
LRP1-201ENST00000243077 ZSCAN25Q6NSZ9 544 aa10.72□□□□□ -0.69
LRP1-201ENST00000243077 SMC2O95347 1197 aa10.72□□□□□ -0.69
LRP1-201ENST00000243077 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.72□□□□□ -0.69
LRP1-201ENST00000243077 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
LRP1-201ENST00000243077 NEMFO60524 1076 aa10.72□□□□□ -0.69
LRP1-201ENST00000243077 DNAI2Q9GZS0 605 aa10.72□□□□□ -0.69
LRP1-201ENST00000243077 MAP9Q49MG5 647 aa10.71□□□□□ -0.69
LRP1-201ENST00000243077 RRBP1Q9P2E9 1410 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms