RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
CCDC170-201ENST00000239374 INTS3Q68E01 1043 aaKnown RBP13.54□□□□□ -0.24
CCDC170-201ENST00000239374 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
CCDC170-201ENST00000239374 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
CCDC170-201ENST00000239374 TBC1D32Q96NH3 1257 aa13.53□□□□□ -0.24
CCDC170-201ENST00000239374 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
CCDC170-201ENST00000239374 UBE2Q2Q8WVN8 375 aa13.53□□□□□ -0.24
CCDC170-201ENST00000239374 PER1O15534 1290 aaPredicted RBP13.53□□□□□ -0.24
CCDC170-201ENST00000239374 PLB1Q6P1J6 1458 aa13.52□□□□□ -0.24
CCDC170-201ENST00000239374 RRP9O43818 475 aaKnown RBP13.52□□□□□ -0.24
CCDC170-201ENST00000239374 CSPP1Q1MSJ5 1256 aa13.52□□□□□ -0.24
CCDC170-201ENST00000239374 ARHGEF11O15085 1522 aa13.52□□□□□ -0.24
CCDC170-201ENST00000239374 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.24
CCDC170-201ENST00000239374 K7ELQ4 463 aaPredicted RBP13.52□□□□□ -0.24
CCDC170-201ENST00000239374 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.24
CCDC170-201ENST00000239374 TEX14Q8IWB6 1497 aa13.52□□□□□ -0.25
CCDC170-201ENST00000239374 SCAPERQ9BY12 1400 aa13.52□□□□□ -0.25
CCDC170-201ENST00000239374 GOLGA6L6A8MZA4 724 aa13.52□□□□□ -0.25
CCDC170-201ENST00000239374 SEC24BO95487 1268 aa13.52□□□□□ -0.25
CCDC170-201ENST00000239374 PLEKHH1Q9ULM0 1364 aa13.51□□□□□ -0.25
CCDC170-201ENST00000239374 XRCC6P12956 609 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC170-201ENST00000239374 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
CCDC170-201ENST00000239374 CHD1LQ86WJ1 897 aa13.51□□□□□ -0.25
CCDC170-201ENST00000239374 PANK2Q9BZ23 570 aa13.51□□□□□ -0.25
CCDC170-201ENST00000239374 CIZ1Q9ULV3 898 aaPredicted RBP13.51□□□□□ -0.25
CCDC170-201ENST00000239374 MLECQ14165 292 aa13.51□□□□□ -0.25
CCDC170-201ENST00000239374 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
CCDC170-201ENST00000239374 GNAI1P63096 354 aa13.5□□□□□ -0.25
CCDC170-201ENST00000239374 TMEM57Q8N5G2 664 aa13.5□□□□□ -0.25
CCDC170-201ENST00000239374 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
CCDC170-201ENST00000239374 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
CCDC170-201ENST00000239374 SPATA31E1Q6ZUB1 1445 aa13.5□□□□□ -0.25
CCDC170-201ENST00000239374 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
CCDC170-201ENST00000239374 GCC1Q96CN9 775 aa13.49□□□□□ -0.25
CCDC170-201ENST00000239374 NRDCO43847 1150 aa13.49□□□□□ -0.25
CCDC170-201ENST00000239374 RABEP1Q15276 862 aa13.49□□□□□ -0.25
CCDC170-201ENST00000239374 CT47B1P0C2W7 299 aaPredicted RBP13.49□□□□□ -0.25
CCDC170-201ENST00000239374 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
CCDC170-201ENST00000239374 TESK2Q96S53 571 aa13.48□□□□□ -0.25
CCDC170-201ENST00000239374 SSH1Q8WYL5 1049 aa13.48□□□□□ -0.25
CCDC170-201ENST00000239374 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
CCDC170-201ENST00000239374 TNPO1Q92973 898 aaKnown RBP13.48□□□□□ -0.25
CCDC170-201ENST00000239374 URB2Q14146 1524 aaKnown RBP13.48□□□□□ -0.25
CCDC170-201ENST00000239374 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
CCDC170-201ENST00000239374 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.25
CCDC170-201ENST00000239374 NEK4P51957 841 aa13.46□□□□□ -0.25
CCDC170-201ENST00000239374 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
CCDC170-201ENST00000239374 CCDC39Q9UFE4 941 aa13.46□□□□□ -0.25
CCDC170-201ENST00000239374 CCDC141Q6ZP82 1450 aa13.46□□□□□ -0.25
CCDC170-201ENST00000239374 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
CCDC170-201ENST00000239374 NUTM2FA1L443 756 aa13.46□□□□□ -0.26
CCDC170-201ENST00000239374 PZPP20742 1482 aa13.46□□□□□ -0.26
CCDC170-201ENST00000239374 ZSCAN30Q86W11 494 aa13.46□□□□□ -0.26
CCDC170-201ENST00000239374 MAP7D2Q96T17 732 aa13.46□□□□□ -0.26
CCDC170-201ENST00000239374 COG3Q96JB2 828 aa13.45□□□□□ -0.26
CCDC170-201ENST00000239374 MPNDQ8N594 471 aa13.45□□□□□ -0.26
CCDC170-201ENST00000239374 TNNQ9UQP3 1299 aa13.45□□□□□ -0.26
CCDC170-201ENST00000239374 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
CCDC170-201ENST00000239374 ATP6V1DQ9Y5K8 247 aa13.45□□□□□ -0.26
CCDC170-201ENST00000239374 PRAG1Q86YV5 1406 aa13.45□□□□□ -0.26
CCDC170-201ENST00000239374 CHMP3Q9Y3E7 222 aa13.44□□□□□ -0.26
CCDC170-201ENST00000239374 CTTNBP2Q8WZ74 1663 aa13.44□□□□□ -0.26
CCDC170-201ENST00000239374 TRIM27P14373 513 aa13.44□□□□□ -0.26
CCDC170-201ENST00000239374 CLCN1P35523 988 aa13.44□□□□□ -0.26
CCDC170-201ENST00000239374 TWISTNBQ3B726 338 aaPredicted RBP13.44□□□□□ -0.26
CCDC170-201ENST00000239374 MBD3O95983 291 aa13.43□□□□□ -0.26
CCDC170-201ENST00000239374 SSFA2P28290 1259 aa13.43□□□□□ -0.26
CCDC170-201ENST00000239374 RRAGDQ9NQL2 400 aaPredicted RBP13.43□□□□□ -0.26
CCDC170-201ENST00000239374 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC170-201ENST00000239374 RLBP1P12271 317 aa13.42□□□□□ -0.26
CCDC170-201ENST00000239374 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
CCDC170-201ENST00000239374 DNAJC5BQ9UF47 199 aa13.42□□□□□ -0.26
CCDC170-201ENST00000239374 LMOD2Q6P5Q4 547 aa13.41□□□□□ -0.26
CCDC170-201ENST00000239374 IFT140Q96RY7 1462 aa13.41□□□□□ -0.26
CCDC170-201ENST00000239374 HTATSF1O43719 755 aaKnown RBP13.41□□□□□ -0.26
CCDC170-201ENST00000239374 CWC22Q9HCG8 908 aaKnown RBP13.41□□□□□ -0.26
CCDC170-201ENST00000239374 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
CCDC170-201ENST00000239374 MTERF4Q7Z6M4 381 aaKnown RBP13.41□□□□□ -0.26
CCDC170-201ENST00000239374 GPRASP1Q5JY77 1395 aa13.4□□□□□ -0.26
CCDC170-201ENST00000239374 UQCRHLA0A096LP55 91 aa13.4□□□□□ -0.26
CCDC170-201ENST00000239374 UQCRHP07919 91 aa13.4□□□□□ -0.26
CCDC170-201ENST00000239374 NUP153P49790 1475 aaKnown RBP13.4□□□□□ -0.26
CCDC170-201ENST00000239374 HDGFP51858 240 aaKnown RBP13.4□□□□□ -0.26
CCDC170-201ENST00000239374 TSPY26PQ9H489 355 aa13.4□□□□□ -0.26
CCDC170-201ENST00000239374 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
CCDC170-201ENST00000239374 FKBP5Q13451 457 aaPredicted RBP13.39□□□□□ -0.27
CCDC170-201ENST00000239374 VPS37CA5D8V6 355 aaPredicted RBP13.39□□□□□ -0.27
CCDC170-201ENST00000239374 GPATCH3Q96I76 525 aa13.39□□□□□ -0.27
CCDC170-201ENST00000239374 THUMPD2Q9BTF0 503 aaKnown RBP13.39□□□□□ -0.27
CCDC170-201ENST00000239374 AMPHP49418 695 aa13.39□□□□□ -0.27
CCDC170-201ENST00000239374 SMC3Q9UQE7 1217 aa13.39□□□□□ -0.27
CCDC170-201ENST00000239374 ADGRF5Q8IZF2 1346 aa13.39□□□□□ -0.27
CCDC170-201ENST00000239374 SCAF11Q99590 1463 aaKnown RBP13.38□□□□□ -0.27
CCDC170-201ENST00000239374 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
CCDC170-201ENST00000239374 DIAPH3Q9NSV4 1193 aa13.38□□□□□ -0.27
CCDC170-201ENST00000239374 HSP90B1P14625 803 aaKnown RBP13.38□□□□□ -0.27
CCDC170-201ENST00000239374 LTV1Q96GA3 475 aaPredicted RBP13.38□□□□□ -0.27
CCDC170-201ENST00000239374 KDM6BO15054 1643 aa13.37□□□□□ -0.27
CCDC170-201ENST00000239374 SYCE3A1L190 88 aa13.37□□□□□ -0.27
CCDC170-201ENST00000239374 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms