RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 SLC4A3P48751 1232 aa22.93■■□□□ 1.26
PKD2-201ENST00000237596 DDX49Q9Y6V7 483 aaKnown RBP22.93■■□□□ 1.26
PKD2-201ENST00000237596 UBTFL1P0CB47 393 aaPredicted RBP22.93■■□□□ 1.26
PKD2-201ENST00000237596 PRKAR2BP31323 418 aa22.92■■□□□ 1.26
PKD2-201ENST00000237596 BRD4O60885 1362 aaPredicted RBP22.92■■□□□ 1.26
PKD2-201ENST00000237596 SLC12A5Q9H2X9 1139 aa22.92■■□□□ 1.26
PKD2-201ENST00000237596 ERC2O15083 957 aa22.92■■□□□ 1.26
PKD2-201ENST00000237596 NEUROD6Q96NK8 337 aa22.92■■□□□ 1.26
PKD2-201ENST00000237596 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
PKD2-201ENST00000237596 PLEKHO1Q53GL0 409 aaPredicted RBP22.92■■□□□ 1.26
PKD2-201ENST00000237596 NOC3LQ8WTT2 800 aaKnown RBP22.92■■□□□ 1.26
PKD2-201ENST00000237596 TRIM29Q14134 588 aa22.91■■□□□ 1.26
PKD2-201ENST00000237596 FBXW7Q969H0 707 aa22.91■■□□□ 1.26
PKD2-201ENST00000237596 RBM33Q96EV2 1170 aaKnown RBP22.91■■□□□ 1.26
PKD2-201ENST00000237596 SYNJ1O43426 1573 aa22.91■■□□□ 1.26
PKD2-201ENST00000237596 PPP2R1AP30153 589 aa22.9■■□□□ 1.26
PKD2-201ENST00000237596 PANK1Q8TE04 598 aa22.9■■□□□ 1.26
PKD2-201ENST00000237596 PES1O00541 588 aaKnown RBP22.9■■□□□ 1.26
PKD2-201ENST00000237596 DHX16O60231 1041 aaKnown RBP22.89■■□□□ 1.26
PKD2-201ENST00000237596 SNAPC4Q5SXM2 1469 aa22.89■■□□□ 1.26
PKD2-201ENST00000237596 TPD52L1Q16890 204 aaPredicted RBP22.89■■□□□ 1.25
PKD2-201ENST00000237596 EFCAB5A4FU69 1503 aa22.88■■□□□ 1.25
PKD2-201ENST00000237596 AAMPQ13685 434 aa22.88■■□□□ 1.25
PKD2-201ENST00000237596 CTDP1Q9Y5B0 961 aaPredicted RBP22.88■■□□□ 1.25
PKD2-201ENST00000237596 SLC26A8Q96RN1 970 aa22.88■■□□□ 1.25
PKD2-201ENST00000237596 ZNF692Q9BU19 519 aaPredicted RBP22.88■■□□□ 1.25
PKD2-201ENST00000237596 CABP1Q9NZU7 370 aa22.88■■□□□ 1.25
PKD2-201ENST00000237596 CDK19Q9BWU1 502 aa22.87■■□□□ 1.25
PKD2-201ENST00000237596 KIAA1107Q9UPP5 1409 aa22.87■■□□□ 1.25
PKD2-201ENST00000237596 CCDC30Q5VVM6 783 aa22.87■■□□□ 1.25
PKD2-201ENST00000237596 INTS3Q68E01 1043 aaKnown RBP22.87■■□□□ 1.25
PKD2-201ENST00000237596 STRN4Q9NRL3 753 aa22.87■■□□□ 1.25
PKD2-201ENST00000237596 TPM3P06753 285 aa22.86■■□□□ 1.25
PKD2-201ENST00000237596 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
PKD2-201ENST00000237596 PRXQ9BXM0 1461 aa22.86■■□□□ 1.25
PKD2-201ENST00000237596 BECN2A8MW95 431 aa22.86■■□□□ 1.25
PKD2-201ENST00000237596 ANKLE2Q86XL3 938 aa22.85■■□□□ 1.25
PKD2-201ENST00000237596 CEP89Q96ST8 783 aa22.85■■□□□ 1.25
PKD2-201ENST00000237596 GNAI3P08754 354 aa22.85■■□□□ 1.25
PKD2-201ENST00000237596 KLHL34Q8N239 644 aa22.85■■□□□ 1.25
PKD2-201ENST00000237596 GOLGA6L19H0YKK7 550 aa22.84■■□□□ 1.25
PKD2-201ENST00000237596 NFXL1Q6ZNB6 911 aa22.84■■□□□ 1.25
PKD2-201ENST00000237596 ERICH2A1L162 156 aa22.83■■□□□ 1.25
PKD2-201ENST00000237596 TATP17735 454 aaPredicted RBP22.83■■□□□ 1.25
PKD2-201ENST00000237596 EHBP1L1Q8N3D4 1523 aa22.83■■□□□ 1.25
PKD2-201ENST00000237596 WASHC4Q2M389 1173 aa22.83■■□□□ 1.25
PKD2-201ENST00000237596 TCEAL9Q9UHQ7 104 aa22.83■■□□□ 1.24
PKD2-201ENST00000237596 SKOR2Q2VWA4 1001 aaPredicted RBP22.82■■□□□ 1.24
PKD2-201ENST00000237596 RBM42Q9BTD8 480 aaKnown RBP22.82■■□□□ 1.24
PKD2-201ENST00000237596 CLASRPQ8N2M8 674 aaKnown RBP22.82■■□□□ 1.24
PKD2-201ENST00000237596 PDE4CQ08493 712 aa22.82■■□□□ 1.24
PKD2-201ENST00000237596 SULT6B1Q6IMI4 303 aa22.82■■□□□ 1.24
PKD2-201ENST00000237596 EXOSC9Q06265 439 aaKnown RBP22.81■■□□□ 1.24
PKD2-201ENST00000237596 NBPF8Q3BBV2 869 aa22.81■■□□□ 1.24
PKD2-201ENST00000237596 RALYLQ86SE5 291 aaKnown RBP22.81■■□□□ 1.24
PKD2-201ENST00000237596 TSR1Q2NL82 804 aaKnown RBP22.8■■□□□ 1.24
PKD2-201ENST00000237596 HMGXB3Q12766 1538 aa22.8■■□□□ 1.24
PKD2-201ENST00000237596 SURF6O75683 361 aaKnown RBP22.8■■□□□ 1.24
PKD2-201ENST00000237596 TWISTNBQ3B726 338 aaPredicted RBP22.8■■□□□ 1.24
PKD2-201ENST00000237596 CDCA7LQ96GN5 454 aa22.8■■□□□ 1.24
PKD2-201ENST00000237596 SMG6Q86US8 1419 aaKnown RBP22.8■■□□□ 1.24
PKD2-201ENST00000237596 FAM177BA6PVY3 158 aa22.79■■□□□ 1.24
PKD2-201ENST00000237596 RPGRIP1LQ68CZ1 1315 aa22.79■■□□□ 1.24
PKD2-201ENST00000237596 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
PKD2-201ENST00000237596 VPS37CA5D8V6 355 aaPredicted RBP22.78■■□□□ 1.24
PKD2-201ENST00000237596 SMC3Q9UQE7 1217 aa22.77■■□□□ 1.24
PKD2-201ENST00000237596 CCDC27Q2M243 656 aa22.77■■□□□ 1.24
PKD2-201ENST00000237596 TOM1L2Q6ZVM7 507 aa22.77■■□□□ 1.24
PKD2-201ENST00000237596 RTEL1-TNFRSF6BF6WH68 1400 aa22.77■■□□□ 1.24
PKD2-201ENST00000237596 POGZQ7Z3K3 1410 aa22.77■■□□□ 1.24
PKD2-201ENST00000237596 HDGFL1Q5TGJ6 251 aa22.76■■□□□ 1.23
PKD2-201ENST00000237596 ANKRD30BQ9BXX2 1392 aa22.76■■□□□ 1.23
PKD2-201ENST00000237596 ZNF530Q6P9A1 599 aaPredicted RBP22.75■■□□□ 1.23
PKD2-201ENST00000237596 GSE1Q14687 1217 aa22.75■■□□□ 1.23
PKD2-201ENST00000237596 KIF6Q6ZMV9 814 aa22.75■■□□□ 1.23
PKD2-201ENST00000237596 BICD2Q8TD16 824 aa22.75■■□□□ 1.23
PKD2-201ENST00000237596 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
PKD2-201ENST00000237596 CCDC47Q96A33 483 aaKnown RBP22.75■■□□□ 1.23
PKD2-201ENST00000237596 TPM2P07951 284 aa22.74■■□□□ 1.23
PKD2-201ENST00000237596 TPM1P09493 284 aa22.74■■□□□ 1.23
PKD2-201ENST00000237596 CHMP5Q9NZZ3 219 aa22.74■■□□□ 1.23
PKD2-201ENST00000237596 KIAA0586Q9BVV6 1533 aa22.74■■□□□ 1.23
PKD2-201ENST00000237596 CDC45O75419 566 aa22.74■■□□□ 1.23
PKD2-201ENST00000237596 PRDM11Q9NQV5 511 aa22.74■■□□□ 1.23
PKD2-201ENST00000237596 FSD1Q9BTV5 496 aa22.74■■□□□ 1.23
PKD2-201ENST00000237596 C22orf23Q9BZE7 217 aa22.74■■□□□ 1.23
PKD2-201ENST00000237596 SAFBQ15424 915 aaKnown RBP eCLIP22.73■■□□□ 1.23
PKD2-201ENST00000237596 FYB1O15117 783 aa22.73■■□□□ 1.23
PKD2-201ENST00000237596 ERBINQ96RT1 1412 aa22.73■■□□□ 1.23
PKD2-201ENST00000237596 DDX54Q8TDD1 881 aaKnown RBP22.73■■□□□ 1.23
PKD2-201ENST00000237596 SLC4A2P04920 1241 aa22.72■■□□□ 1.23
PKD2-201ENST00000237596 TSR2Q969E8 191 aaKnown RBP22.72■■□□□ 1.23
PKD2-201ENST00000237596 HECW1Q76N89 1606 aa22.71■■□□□ 1.23
PKD2-201ENST00000237596 CNTROBQ8N137 903 aa22.71■■□□□ 1.23
PKD2-201ENST00000237596 TBC1D2BQ9UPU7 963 aa22.71■■□□□ 1.23
PKD2-201ENST00000237596 DAPK1P53355 1430 aa22.71■■□□□ 1.23
PKD2-201ENST00000237596 NUTM2BA6NNL0 878 aaPredicted RBP22.71■■□□□ 1.23
PKD2-201ENST00000237596 NUTM2EB1AL46 878 aaPredicted RBP22.71■■□□□ 1.23
PKD2-201ENST00000237596 CABP4P57796 275 aa22.71■■□□□ 1.23
PKD2-201ENST00000237596 NUTM2AQ8IVF1 878 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms