RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 BANK1Q8NDB2 785 aa8.49□□□□□ -1.05
STAG1-201ENST00000236698 ERICH4A6NGS2 130 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 MS4A1P11836 297 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 HECW1Q76N89 1606 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 RGS3P49796 1198 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 SYNJ2O15056 1496 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 TPM4P67936 248 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 RPAINQ86UA6 219 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 NLRP13Q86W25 1043 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 CCDC34Q96HJ3 373 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 STAG3Q9UJ98 1225 aa8.48□□□□□ -1.05
STAG1-201ENST00000236698 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
STAG1-201ENST00000236698 NAP1L4Q99733 375 aaKnown RBP8.48□□□□□ -1.05
STAG1-201ENST00000236698 MYCNP04198 464 aaPredicted RBP8.47□□□□□ -1.05
STAG1-201ENST00000236698 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
STAG1-201ENST00000236698 NBPF1Q3BBV0 1214 aa8.47□□□□□ -1.05
STAG1-201ENST00000236698 hCG_2014768A0A024R1R8 64 aa8.47□□□□□ -1.05
STAG1-201ENST00000236698 VGLL3A8MV65 326 aa8.47□□□□□ -1.05
STAG1-201ENST00000236698 HTATSF1O43719 755 aaKnown RBP8.47□□□□□ -1.05
STAG1-201ENST00000236698 SPAG9O60271 1321 aaKnown RBP8.47□□□□□ -1.05
STAG1-201ENST00000236698 ENOX2Q16206 610 aaKnown RBP8.47□□□□□ -1.05
STAG1-201ENST00000236698 SPOCK3Q9BQ16 436 aa8.47□□□□□ -1.05
STAG1-201ENST00000236698 KCNG1Q9UIX4 513 aa8.47□□□□□ -1.05
STAG1-201ENST00000236698 MPNDQ8N594 471 aa8.46□□□□□ -1.05
STAG1-201ENST00000236698 ANKRD50Q9ULJ7 1429 aa8.46□□□□□ -1.05
STAG1-201ENST00000236698 KCNA1Q09470 495 aa8.46□□□□□ -1.05
STAG1-201ENST00000236698 DCAF11Q8TEB1 546 aa8.46□□□□□ -1.05
STAG1-201ENST00000236698 LONRF3Q496Y0 759 aa8.46□□□□□ -1.06
STAG1-201ENST00000236698 CEP120Q8N960 986 aa8.46□□□□□ -1.06
STAG1-201ENST00000236698 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.06
STAG1-201ENST00000236698 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
STAG1-201ENST00000236698 TRAIPQ9BWF2 469 aa8.45□□□□□ -1.06
STAG1-201ENST00000236698 IQGAP2Q13576 1575 aa8.45□□□□□ -1.06
STAG1-201ENST00000236698 NBPF11Q86T75 865 aa8.45□□□□□ -1.06
STAG1-201ENST00000236698 NUDCQ9Y266 331 aa8.45□□□□□ -1.06
STAG1-201ENST00000236698 GTF2E1P29083 439 aaPredicted RBP8.44□□□□□ -1.06
STAG1-201ENST00000236698 GPS2Q13227 327 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 RFX1P22670 979 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 FLIIQ13045 1269 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 RGL3Q3MIN7 710 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 GET4Q7L5D6 327 aaPredicted RBP8.44□□□□□ -1.06
STAG1-201ENST00000236698 CCAR1Q8IX12 1150 aaKnown RBP8.44□□□□□ -1.06
STAG1-201ENST00000236698 DRC1Q96MC2 740 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 CEP89Q96ST8 783 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 GOLGA6L3A6NEY3 463 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 NEXNQ0ZGT2 675 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 TSR1Q2NL82 804 aaKnown RBP8.44□□□□□ -1.06
STAG1-201ENST00000236698 FAM13BQ9NYF5 915 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 NAIPQ13075 1403 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 ERCC3P19447 782 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 NOM1Q5C9Z4 860 aaKnown RBP8.44□□□□□ -1.06
STAG1-201ENST00000236698 KRBA2Q6ZNG9 492 aa8.44□□□□□ -1.06
STAG1-201ENST00000236698 NESP48681 1621 aa8.43□□□□□ -1.06
STAG1-201ENST00000236698 IGBP1P78318 339 aa8.43□□□□□ -1.06
STAG1-201ENST00000236698 CALD1Q05682 793 aaKnown RBP8.43□□□□□ -1.06
STAG1-201ENST00000236698 HSP90AB2PQ58FF8 381 aa8.43□□□□□ -1.06
STAG1-201ENST00000236698 EPRSP07814 1512 aaKnown RBP8.43□□□□□ -1.06
STAG1-201ENST00000236698 ZNF280DQ6N043 979 aa8.43□□□□□ -1.06
STAG1-201ENST00000236698 KIF15Q9NS87 1388 aa8.43□□□□□ -1.06
STAG1-201ENST00000236698 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
STAG1-201ENST00000236698 SUPT6HQ7KZ85 1726 aaKnown RBP8.43□□□□□ -1.06
STAG1-201ENST00000236698 SAFB2Q14151 953 aaKnown RBP eCLIP8.43□□□□□ -1.06
STAG1-201ENST00000236698 SPOCK2Q92563 424 aa8.43□□□□□ -1.06
STAG1-201ENST00000236698 STK24Q9Y6E0 443 aa8.43□□□□□ -1.06
STAG1-201ENST00000236698 RIOK3O14730 519 aaKnown RBP8.42□□□□□ -1.06
STAG1-201ENST00000236698 SPATA32Q96LK8 384 aa8.42□□□□□ -1.06
STAG1-201ENST00000236698 CDR1P51861 262 aa8.42□□□□□ -1.06
STAG1-201ENST00000236698 PRKRIP1Q9H875 184 aaPredicted RBP8.42□□□□□ -1.06
STAG1-201ENST00000236698 CREB3O43889 395 aa8.42□□□□□ -1.06
STAG1-201ENST00000236698 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
STAG1-201ENST00000236698 KAT6BQ8WYB5 2073 aa8.41□□□□□ -1.06
STAG1-201ENST00000236698 PAX3P23760 479 aa8.41□□□□□ -1.06
STAG1-201ENST00000236698 CCDC70Q6NSX1 233 aa8.41□□□□□ -1.06
STAG1-201ENST00000236698 CGNQ9P2M7 1197 aaKnown RBP8.41□□□□□ -1.06
STAG1-201ENST00000236698 G3BP2Q9UN86 482 aaKnown RBP8.41□□□□□ -1.06
STAG1-201ENST00000236698 RAB11FIP3O75154 756 aa8.41□□□□□ -1.06
STAG1-201ENST00000236698 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.41□□□□□ -1.06
STAG1-201ENST00000236698 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.41□□□□□ -1.06
STAG1-201ENST00000236698 ZBED9Q6R2W3 1325 aa8.41□□□□□ -1.06
STAG1-201ENST00000236698 WDR97A6NE52 1622 aa8.41□□□□□ -1.06
STAG1-201ENST00000236698 SH3BGRP55822 239 aaPredicted RBP8.41□□□□□ -1.06
STAG1-201ENST00000236698 PPP4R4Q6NUP7 873 aa8.41□□□□□ -1.06
STAG1-201ENST00000236698 NBPF6Q5VWK0 638 aa8.41□□□□□ -1.06
STAG1-201ENST00000236698 NBPF5PQ86XG9 351 aaPredicted RBP8.41□□□□□ -1.06
STAG1-201ENST00000236698 NBPF4Q96M43 638 aa8.41□□□□□ -1.06
STAG1-201ENST00000236698 URB2Q14146 1524 aaKnown RBP8.4□□□□□ -1.06
STAG1-201ENST00000236698 KIAA1107Q9UPP5 1409 aa8.4□□□□□ -1.06
STAG1-201ENST00000236698 ZC3H15Q8WU90 426 aaKnown RBP8.4□□□□□ -1.06
STAG1-201ENST00000236698 SERPINA10Q9UK55 444 aa8.4□□□□□ -1.06
STAG1-201ENST00000236698 TERF1P54274 439 aa8.4□□□□□ -1.07
STAG1-201ENST00000236698 ZKSCAN2Q63HK3 967 aa8.39□□□□□ -1.07
STAG1-201ENST00000236698 ZHX3Q9H4I2 956 aa8.39□□□□□ -1.07
STAG1-201ENST00000236698 NBPF20Q3BBV1 942 aa8.39□□□□□ -1.07
STAG1-201ENST00000236698 CCDC7Q96M83 1385 aa8.39□□□□□ -1.07
STAG1-201ENST00000236698 USP47Q96K76 1375 aa8.39□□□□□ -1.07
STAG1-201ENST00000236698 TMCO5BA8MYB1 307 aa8.39□□□□□ -1.07
STAG1-201ENST00000236698 MYCBPQ99417 103 aaPredicted RBP8.39□□□□□ -1.07
STAG1-201ENST00000236698 GRIN2AQ12879 1464 aa8.39□□□□□ -1.07
STAG1-201ENST00000236698 NOP58Q9Y2X3 529 aaKnown RBP8.39□□□□□ -1.07
STAG1-201ENST00000236698 LIG1P18858 919 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms