RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 BCANQ96GW7 911 aa21.48■■□□□ 1.03
ITGA4-201ENST00000233573 METP08581 1390 aa21.48■■□□□ 1.03
ITGA4-201ENST00000233573 PRAM1Q96QH2 718 aa21.48■■□□□ 1.03
ITGA4-201ENST00000233573 HDGFP51858 240 aaKnown RBP21.47■■□□□ 1.03
ITGA4-201ENST00000233573 TXNDC2Q86VQ3 553 aa21.45■■□□□ 1.02
ITGA4-201ENST00000233573 CEP170BQ9Y4F5 1589 aaPredicted RBP21.45■■□□□ 1.02
ITGA4-201ENST00000233573 SLIT1O75093 1534 aa21.45■■□□□ 1.02
ITGA4-201ENST00000233573 ARHGAP23Q9P227 1491 aa21.44■■□□□ 1.02
ITGA4-201ENST00000233573 USP32Q8NFA0 1604 aa21.44■■□□□ 1.02
ITGA4-201ENST00000233573 NUDCQ9Y266 331 aa21.44■■□□□ 1.02
ITGA4-201ENST00000233573 POGKQ9P215 609 aa21.43■■□□□ 1.02
ITGA4-201ENST00000233573 ADAMTS13Q76LX8 1427 aa21.43■■□□□ 1.02
ITGA4-201ENST00000233573 EVC2Q86UK5 1308 aa21.43■■□□□ 1.02
ITGA4-201ENST00000233573 MINK1Q8N4C8 1332 aaPredicted RBP21.43■■□□□ 1.02
ITGA4-201ENST00000233573 SLC12A5Q9H2X9 1139 aa21.42■■□□□ 1.02
ITGA4-201ENST00000233573 PLEKHG1Q9ULL1 1385 aa21.42■■□□□ 1.02
ITGA4-201ENST00000233573 PLEKHH1Q9ULM0 1364 aa21.42■■□□□ 1.02
ITGA4-201ENST00000233573 WAPLQ7Z5K2 1190 aa21.41■■□□□ 1.02
ITGA4-201ENST00000233573 SENP3-EIF4A1A0A087X0R7 540 aa21.4■■□□□ 1.02
ITGA4-201ENST00000233573 THEMISQ8N1K5 641 aaPredicted RBP21.4■■□□□ 1.02
ITGA4-201ENST00000233573 EID1Q9Y6B2 187 aa21.4■■□□□ 1.02
ITGA4-201ENST00000233573 NSD3Q9BZ95 1437 aa21.4■■□□□ 1.02
ITGA4-201ENST00000233573 DLC1Q96QB1 1528 aa21.4■■□□□ 1.02
ITGA4-201ENST00000233573 CABP2Q9NPB3 220 aa21.4■■□□□ 1.02
ITGA4-201ENST00000233573 ABCC11Q96J66 1382 aa21.38■■□□□ 1.01
ITGA4-201ENST00000233573 SLC26A8Q96RN1 970 aa21.38■■□□□ 1.01
ITGA4-201ENST00000233573 ERICH6BQ5W0A0 696 aa21.37■■□□□ 1.01
ITGA4-201ENST00000233573 ADAMTS8Q9UP79 889 aa21.36■■□□□ 1.01
ITGA4-201ENST00000233573 RNF123Q5XPI4 1314 aa21.36■■□□□ 1.01
ITGA4-201ENST00000233573 ZNF142P52746 1687 aaPredicted RBP21.36■■□□□ 1.01
ITGA4-201ENST00000233573 KNDC1Q76NI1 1749 aa21.36■■□□□ 1.01
ITGA4-201ENST00000233573 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
ITGA4-201ENST00000233573 MED14O60244 1454 aa21.35■■□□□ 1.01
ITGA4-201ENST00000233573 SRPK2P78362 688 aaKnown RBP21.35■■□□□ 1.01
ITGA4-201ENST00000233573 IRX6P78412 446 aaPredicted RBP21.35■■□□□ 1.01
ITGA4-201ENST00000233573 NINLQ9Y2I6 1382 aa21.34■■□□□ 1.01
ITGA4-201ENST00000233573 PDE3BQ13370 1112 aa21.33■■□□□ 1
ITGA4-201ENST00000233573 CPS1P31327 1500 aa21.32■■□□□ 1
ITGA4-201ENST00000233573 TECPR2O15040 1411 aa21.32■■□□□ 1
ITGA4-201ENST00000233573 PTPRUQ92729 1446 aa21.31■■□□□ 1
ITGA4-201ENST00000233573 SETD1BQ9UPS6 1966 aaKnown RBP21.31■■□□□ 1
ITGA4-201ENST00000233573 ROBO2Q9HCK4 1378 aa21.31■■□□□ 1
ITGA4-201ENST00000233573 CDK19Q9BWU1 502 aa21.3■■□□□ 1
ITGA4-201ENST00000233573 ATAD2Q6PL18 1390 aa21.29■■□□□ 1
ITGA4-201ENST00000233573 POLR3AO14802 1390 aaPredicted RBP21.29■■□□□ 1
ITGA4-201ENST00000233573 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
ITGA4-201ENST00000233573 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
ITGA4-201ENST00000233573 CD163L1Q9NR16 1453 aa21.28■■□□□ 1
ITGA4-201ENST00000233573 FAM135BQ49AJ0 1406 aa21.28■■□□□ 1
ITGA4-201ENST00000233573 NSD2O96028 1365 aa21.28■■□□□ 1
ITGA4-201ENST00000233573 A0A1W2PP64 1363 aa21.27■■□□□ 1
ITGA4-201ENST00000233573 SALL2Q9Y467 1007 aaPredicted RBP21.27■□□□□ 0.99
ITGA4-201ENST00000233573 SHPRHQ149N8 1683 aa21.26■□□□□ 0.99
ITGA4-201ENST00000233573 MORC1Q86VD1 984 aa21.25■□□□□ 0.99
ITGA4-201ENST00000233573 TBX22Q9Y458 520 aa21.25■□□□□ 0.99
ITGA4-201ENST00000233573 DIP2AQ14689 1571 aa21.24■□□□□ 0.99
ITGA4-201ENST00000233573 CDCA7LQ96GN5 454 aa21.24■□□□□ 0.99
ITGA4-201ENST00000233573 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.23■□□□□ 0.99
ITGA4-201ENST00000233573 SIRT1Q96EB6 747 aa21.23■□□□□ 0.99
ITGA4-201ENST00000233573 AMOTL2Q9Y2J4 779 aa21.23■□□□□ 0.99
ITGA4-201ENST00000233573 ANKLE2Q86XL3 938 aa21.22■□□□□ 0.99
ITGA4-201ENST00000233573 PPP4R2Q9NY27 417 aa21.22■□□□□ 0.99
ITGA4-201ENST00000233573 ZNF521Q96K83 1311 aa21.22■□□□□ 0.99
ITGA4-201ENST00000233573 ANKRD26Q9UPS8 1709 aa21.21■□□□□ 0.99
ITGA4-201ENST00000233573 WASLO00401 505 aaPredicted RBP21.21■□□□□ 0.99
ITGA4-201ENST00000233573 CABP1Q9NZU7 370 aa21.2■□□□□ 0.98
ITGA4-201ENST00000233573 XRN1Q8IZH2 1706 aaKnown RBP21.19■□□□□ 0.98
ITGA4-201ENST00000233573 TERF2IPQ9NYB0 399 aa21.18■□□□□ 0.98
ITGA4-201ENST00000233573 NCKAP5LQ9HCH0 1330 aa21.17■□□□□ 0.98
ITGA4-201ENST00000233573 RCAN3Q9UKA8 241 aa21.16■□□□□ 0.98
ITGA4-201ENST00000233573 PTCH1Q13635 1447 aa21.16■□□□□ 0.98
ITGA4-201ENST00000233573 KCNA6P17658 529 aa21.16■□□□□ 0.98
ITGA4-201ENST00000233573 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
ITGA4-201ENST00000233573 ADGRB2O60241 1585 aa21.16■□□□□ 0.98
ITGA4-201ENST00000233573 ATP7BP35670 1465 aa21.15■□□□□ 0.98
ITGA4-201ENST00000233573 CCDC146Q8IYE0 955 aa21.14■□□□□ 0.98
ITGA4-201ENST00000233573 TSHZ2Q9NRE2 1034 aa21.14■□□□□ 0.98
ITGA4-201ENST00000233573 PPIP5K1Q6PFW1 1433 aa21.14■□□□□ 0.97
ITGA4-201ENST00000233573 PRR36Q9H6K5 1346 aa21.14■□□□□ 0.97
ITGA4-201ENST00000233573 KIF20BQ96Q89 1820 aa21.14■□□□□ 0.97
ITGA4-201ENST00000233573 MTHFSP49914 203 aa21.14■□□□□ 0.97
ITGA4-201ENST00000233573 NUDT16Q96DE0 195 aaKnown RBP21.14■□□□□ 0.97
ITGA4-201ENST00000233573 FYB1O15117 783 aa21.13■□□□□ 0.97
ITGA4-201ENST00000233573 NUTM2FA1L443 756 aa21.13■□□□□ 0.97
ITGA4-201ENST00000233573 NPHP4O75161 1426 aaPredicted RBP21.12■□□□□ 0.97
ITGA4-201ENST00000233573 RRP1P56182 461 aaKnown RBP21.12■□□□□ 0.97
ITGA4-201ENST00000233573 HDGFL2Q7Z4V5 671 aaPredicted RBP21.11■□□□□ 0.97
ITGA4-201ENST00000233573 CHD2O14647 1828 aaKnown RBP21.11■□□□□ 0.97
ITGA4-201ENST00000233573 KDM4FA0A1W2PPD8 638 aa21.11■□□□□ 0.97
ITGA4-201ENST00000233573 APAF1O14727 1248 aa21.11■□□□□ 0.97
ITGA4-201ENST00000233573 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
ITGA4-201ENST00000233573 NGEFQ8N5V2 710 aa21.1■□□□□ 0.97
ITGA4-201ENST00000233573 CPSF1Q10570 1443 aaKnown RBP21.1■□□□□ 0.97
ITGA4-201ENST00000233573 DUSP27Q5VZP5 1158 aa21.09■□□□□ 0.97
ITGA4-201ENST00000233573 GGNBP2Q9H3C7 697 aa21.09■□□□□ 0.97
ITGA4-201ENST00000233573 GOLGA2Q08379 1002 aa21.08■□□□□ 0.97
ITGA4-201ENST00000233573 TRMT2AQ8IZ69 625 aaKnown RBP21.08■□□□□ 0.97
ITGA4-201ENST00000233573 COL3A1P02461 1466 aaPredicted RBP21.08■□□□□ 0.97
ITGA4-201ENST00000233573 IQSEC2Q5JU85 1478 aa21.08■□□□□ 0.97
ITGA4-201ENST00000233573 CFAP53Q96M91 514 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms