RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCL13-201ENST00000225844 AHDC1Q5TGY3 1603 aaPredicted RBP11.04□□□□□ -0.64
CCL13-201ENST00000225844 RGS12O14924 1447 aa11.03□□□□□ -0.64
CCL13-201ENST00000225844 ZFYVE9O95405 1425 aa11.03□□□□□ -0.64
CCL13-201ENST00000225844 CCER1Q8TC90 406 aaPredicted RBP11.02□□□□□ -0.65
CCL13-201ENST00000225844 AMOTL2Q9Y2J4 779 aa11.02□□□□□ -0.65
CCL13-201ENST00000225844 LRRC59Q96AG4 307 aaKnown RBP11.01□□□□□ -0.65
CCL13-201ENST00000225844 NGLY1Q96IV0 654 aa11.01□□□□□ -0.65
CCL13-201ENST00000225844 ZRANB1Q9UGI0 708 aa11.01□□□□□ -0.65
CCL13-201ENST00000225844 SHPRHQ149N8 1683 aa11.01□□□□□ -0.65
CCL13-201ENST00000225844 SPHKAPQ2M3C7 1700 aa11.01□□□□□ -0.65
CCL13-201ENST00000225844 ADAMTS2O95450 1211 aa11□□□□□ -0.65
CCL13-201ENST00000225844 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
CCL13-201ENST00000225844 DDX17Q92841 729 aaKnown RBP10.99□□□□□ -0.65
CCL13-201ENST00000225844 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
CCL13-201ENST00000225844 PIK3R4Q99570 1358 aa10.99□□□□□ -0.65
CCL13-201ENST00000225844 ADAMTS13Q76LX8 1427 aa10.99□□□□□ -0.65
CCL13-201ENST00000225844 CHD2O14647 1828 aaKnown RBP10.98□□□□□ -0.65
CCL13-201ENST00000225844 ASXL1Q8IXJ9 1541 aa10.98□□□□□ -0.65
CCL13-201ENST00000225844 DIP2AQ14689 1571 aa10.98□□□□□ -0.65
CCL13-201ENST00000225844 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
CCL13-201ENST00000225844 SPATA31E1Q6ZUB1 1445 aa10.97□□□□□ -0.65
CCL13-201ENST00000225844 DCCP43146 1447 aa10.96□□□□□ -0.65
CCL13-201ENST00000225844 PNPLA6Q8IY17 1366 aa10.96□□□□□ -0.65
CCL13-201ENST00000225844 USP21Q9UK80 565 aa10.96□□□□□ -0.65
CCL13-201ENST00000225844 MST1RQ04912 1400 aa10.95□□□□□ -0.66
CCL13-201ENST00000225844 PTPRUQ92729 1446 aa10.95□□□□□ -0.66
CCL13-201ENST00000225844 ZNF326Q5BKZ1 582 aaKnown RBP10.95□□□□□ -0.66
CCL13-201ENST00000225844 TMEM131LA2VDJ0 1609 aa10.95□□□□□ -0.66
CCL13-201ENST00000225844 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
CCL13-201ENST00000225844 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
CCL13-201ENST00000225844 CLTCL1P53675 1640 aa10.94□□□□□ -0.66
CCL13-201ENST00000225844 KIF1BO60333 1816 aa10.93□□□□□ -0.66
CCL13-201ENST00000225844 TONSLQ96HA7 1378 aa10.92□□□□□ -0.66
CCL13-201ENST00000225844 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
CCL13-201ENST00000225844 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
CCL13-201ENST00000225844 NEUROD1Q13562 356 aa10.92□□□□□ -0.66
CCL13-201ENST00000225844 RGL3Q3MIN7 710 aa10.92□□□□□ -0.66
CCL13-201ENST00000225844 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
CCL13-201ENST00000225844 SIN3AQ96ST3 1273 aa10.92□□□□□ -0.66
CCL13-201ENST00000225844 EP400Q96L91 3159 aa10.91□□□□□ -0.66
CCL13-201ENST00000225844 SETBP1Q9Y6X0 1596 aa10.9□□□□□ -0.66
CCL13-201ENST00000225844 ZEB1P37275 1124 aaPredicted RBP10.9□□□□□ -0.66
CCL13-201ENST00000225844 DCAF11Q8TEB1 546 aa10.9□□□□□ -0.66
CCL13-201ENST00000225844 MYO5BQ9ULV0 1848 aa10.9□□□□□ -0.66
CCL13-201ENST00000225844 MYOM2P54296 1465 aa10.89□□□□□ -0.67
CCL13-201ENST00000225844 CCDC125Q86Z20 511 aa10.89□□□□□ -0.67
CCL13-201ENST00000225844 L3MBTL2Q969R5 705 aa10.89□□□□□ -0.67
CCL13-201ENST00000225844 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
CCL13-201ENST00000225844 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
CCL13-201ENST00000225844 ADGRL3Q9HAR2 1447 aa10.89□□□□□ -0.67
CCL13-201ENST00000225844 METP08581 1390 aa10.89□□□□□ -0.67
CCL13-201ENST00000225844 NHSL1Q5SYE7 1610 aa10.88□□□□□ -0.67
CCL13-201ENST00000225844 FNBP4Q8N3X1 1017 aaPredicted RBP10.88□□□□□ -0.67
CCL13-201ENST00000225844 ORAI2Q96SN7 254 aa10.88□□□□□ -0.67
CCL13-201ENST00000225844 ATRNO75882 1429 aa10.87□□□□□ -0.67
CCL13-201ENST00000225844 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
CCL13-201ENST00000225844 NEXMIFQ5QGS0 1516 aa10.87□□□□□ -0.67
CCL13-201ENST00000225844 C1orf167Q5SNV9 1468 aa10.87□□□□□ -0.67
CCL13-201ENST00000225844 NRXN1Q9ULB1 1477 aa10.87□□□□□ -0.67
CCL13-201ENST00000225844 PTCH1Q13635 1447 aa10.86□□□□□ -0.67
CCL13-201ENST00000225844 C14orf93Q9H972 538 aaKnown RBP10.86□□□□□ -0.67
CCL13-201ENST00000225844 SOS2Q07890 1332 aaPredicted RBP10.85□□□□□ -0.67
CCL13-201ENST00000225844 SF3B2Q13435 895 aaKnown RBP10.85□□□□□ -0.67
CCL13-201ENST00000225844 AKT1S1Q96B36 256 aa10.85□□□□□ -0.67
CCL13-201ENST00000225844 XRN1Q8IZH2 1706 aaKnown RBP10.84□□□□□ -0.67
CCL13-201ENST00000225844 GJD4Q96KN9 370 aaPredicted RBP10.84□□□□□ -0.67
CCL13-201ENST00000225844 PIK3C2GO75747 1445 aa10.84□□□□□ -0.67
CCL13-201ENST00000225844 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
CCL13-201ENST00000225844 DEFB132Q7Z7B7 95 aa10.83□□□□□ -0.68
CCL13-201ENST00000225844 SIRT1Q96EB6 747 aa10.83□□□□□ -0.68
CCL13-201ENST00000225844 KDM2AQ9Y2K7 1162 aa10.83□□□□□ -0.68
CCL13-201ENST00000225844 PPLO60437 1756 aa10.82□□□□□ -0.68
CCL13-201ENST00000225844 SLC24A1O60721 1099 aa10.82□□□□□ -0.68
CCL13-201ENST00000225844 XPCQ01831 940 aaPredicted RBP10.82□□□□□ -0.68
CCL13-201ENST00000225844 FKBP8Q14318 412 aa10.82□□□□□ -0.68
CCL13-201ENST00000225844 ESCO1Q5FWF5 840 aa10.82□□□□□ -0.68
CCL13-201ENST00000225844 BLMP54132 1417 aaPredicted RBP10.82□□□□□ -0.68
CCL13-201ENST00000225844 PRAG1Q86YV5 1406 aa10.82□□□□□ -0.68
CCL13-201ENST00000225844 BCL9LQ86UU0 1499 aa10.81□□□□□ -0.68
CCL13-201ENST00000225844 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
CCL13-201ENST00000225844 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
CCL13-201ENST00000225844 IFT172Q9UG01 1749 aa10.81□□□□□ -0.68
CCL13-201ENST00000225844 NRXN3Q9Y4C0 1643 aa10.8□□□□□ -0.68
CCL13-201ENST00000225844 ROBO2Q9HCK4 1378 aa10.8□□□□□ -0.68
CCL13-201ENST00000225844 LAMC1P11047 1609 aa10.8□□□□□ -0.68
CCL13-201ENST00000225844 NALCNQ8IZF0 1738 aa10.79□□□□□ -0.68
CCL13-201ENST00000225844 PSDA5PKW4 1024 aaPredicted RBP10.79□□□□□ -0.68
CCL13-201ENST00000225844 UNC5CLQ8IV45 518 aa10.79□□□□□ -0.68
CCL13-201ENST00000225844 ABCC11Q96J66 1382 aa10.78□□□□□ -0.68
CCL13-201ENST00000225844 KIAA1210Q9ULL0 1709 aa10.78□□□□□ -0.68
CCL13-201ENST00000225844 FOXO3O43524 673 aa10.78□□□□□ -0.68
CCL13-201ENST00000225844 HAP1P54257 671 aaPredicted RBP10.78□□□□□ -0.68
CCL13-201ENST00000225844 CFAP70Q5T0N1 1121 aa10.78□□□□□ -0.68
CCL13-201ENST00000225844 CCDC9Q9Y3X0 531 aaKnown RBP10.78□□□□□ -0.68
CCL13-201ENST00000225844 GPRASP1Q5JY77 1395 aa10.77□□□□□ -0.68
CCL13-201ENST00000225844 RALGAPBQ86X10 1494 aa10.77□□□□□ -0.69
CCL13-201ENST00000225844 A0A0G2JS52 829 aa10.77□□□□□ -0.69
CCL13-201ENST00000225844 NUTM2FA1L443 756 aa10.77□□□□□ -0.69
CCL13-201ENST00000225844 PLEKHG5O94827 1062 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms