RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 ADAM33Q9BZ11 813 aa11.52□□□□□ -0.57
CCL1-201ENST00000225842 RBM27Q9P2N5 1060 aaKnown RBP11.52□□□□□ -0.57
CCL1-201ENST00000225842 SERPINA10Q9UK55 444 aa11.52□□□□□ -0.57
CCL1-201ENST00000225842 CUL7Q14999 1698 aa11.52□□□□□ -0.57
CCL1-201ENST00000225842 MAGI3Q5TCQ9 1506 aa11.51□□□□□ -0.57
CCL1-201ENST00000225842 DIXDC1Q155Q3 683 aa11.51□□□□□ -0.57
CCL1-201ENST00000225842 BANK1Q8NDB2 785 aa11.51□□□□□ -0.57
CCL1-201ENST00000225842 CDCA7LQ96GN5 454 aa11.51□□□□□ -0.57
CCL1-201ENST00000225842 NECTIN2Q92692 538 aa11.5□□□□□ -0.57
CCL1-201ENST00000225842 KHSRPQ92945 711 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCL1-201ENST00000225842 WDR7Q9Y4E6 1490 aa11.5□□□□□ -0.57
CCL1-201ENST00000225842 NUDT7P0C024 238 aa11.49□□□□□ -0.57
CCL1-201ENST00000225842 RIC3Q7Z5B4 369 aa11.49□□□□□ -0.57
CCL1-201ENST00000225842 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
CCL1-201ENST00000225842 ZNF330Q9Y3S2 320 aaPredicted RBP11.49□□□□□ -0.57
CCL1-201ENST00000225842 IGF1RP08069 1367 aa11.49□□□□□ -0.57
CCL1-201ENST00000225842 ADAMTSL3P82987 1691 aa11.49□□□□□ -0.57
CCL1-201ENST00000225842 TMEM259Q4ZIN3 620 aa11.48□□□□□ -0.57
CCL1-201ENST00000225842 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
CCL1-201ENST00000225842 CSPP1Q1MSJ5 1256 aa11.47□□□□□ -0.57
CCL1-201ENST00000225842 PLSCR2Q9NRY7 297 aa11.47□□□□□ -0.57
CCL1-201ENST00000225842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.46□□□□□ -0.57
CCL1-201ENST00000225842 RCCD1A6NED2 376 aa11.46□□□□□ -0.57
CCL1-201ENST00000225842 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
CCL1-201ENST00000225842 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
CCL1-201ENST00000225842 FAM198AQ9UFP1 575 aa11.46□□□□□ -0.57
CCL1-201ENST00000225842 RAPGEF3O95398 923 aa11.45□□□□□ -0.58
CCL1-201ENST00000225842 PPP2R2DQ66LE6 453 aa11.45□□□□□ -0.58
CCL1-201ENST00000225842 GDPD2Q9HCC8 539 aa11.45□□□□□ -0.58
CCL1-201ENST00000225842 CD46P15529 392 aa11.44□□□□□ -0.58
CCL1-201ENST00000225842 NPM2Q86SE8 214 aaKnown RBP11.44□□□□□ -0.58
CCL1-201ENST00000225842 MTMR14Q8NCE2 650 aa11.44□□□□□ -0.58
CCL1-201ENST00000225842 ARAP3Q8WWN8 1544 aa11.44□□□□□ -0.58
CCL1-201ENST00000225842 ZCCHC11Q5TAX3 1644 aaKnown RBP11.43□□□□□ -0.58
CCL1-201ENST00000225842 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
CCL1-201ENST00000225842 MADDQ8WXG6 1647 aa11.42□□□□□ -0.58
CCL1-201ENST00000225842 DDX11L8A8MPP1 907 aa11.42□□□□□ -0.58
CCL1-201ENST00000225842 SPTLC1O15269 473 aa11.42□□□□□ -0.58
CCL1-201ENST00000225842 COL9A1P20849 921 aa11.42□□□□□ -0.58
CCL1-201ENST00000225842 EYA1Q99502 592 aa11.42□□□□□ -0.58
CCL1-201ENST00000225842 MOXD2PA6NHM9 499 aa11.41□□□□□ -0.58
CCL1-201ENST00000225842 RSBN1LQ6PCB5 846 aaPredicted RBP11.41□□□□□ -0.58
CCL1-201ENST00000225842 DISP1Q96F81 1524 aa11.4□□□□□ -0.58
CCL1-201ENST00000225842 NDUFV2P19404 249 aa11.4□□□□□ -0.58
CCL1-201ENST00000225842 ABL2P42684 1182 aa11.4□□□□□ -0.58
CCL1-201ENST00000225842 QPCTQ16769 361 aa11.4□□□□□ -0.58
CCL1-201ENST00000225842 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.59
CCL1-201ENST00000225842 PHLDB1Q86UU1 1377 aa11.4□□□□□ -0.59
CCL1-201ENST00000225842 C3orf80F5H4A9 247 aa11.39□□□□□ -0.59
CCL1-201ENST00000225842 NUDT18Q6ZVK8 323 aa11.39□□□□□ -0.59
CCL1-201ENST00000225842 SULF1Q8IWU6 871 aa11.39□□□□□ -0.59
CCL1-201ENST00000225842 TRAIPQ9BWF2 469 aa11.39□□□□□ -0.59
CCL1-201ENST00000225842 TSKSQ9UJT2 592 aa11.39□□□□□ -0.59
CCL1-201ENST00000225842 CCDC9Q9Y3X0 531 aaKnown RBP11.39□□□□□ -0.59
CCL1-201ENST00000225842 BCORL1Q5H9F3 1711 aa11.38□□□□□ -0.59
CCL1-201ENST00000225842 KIF27Q86VH2 1401 aa11.38□□□□□ -0.59
CCL1-201ENST00000225842 YEATS2Q9ULM3 1422 aa11.38□□□□□ -0.59
CCL1-201ENST00000225842 AP1G2O75843 785 aa11.38□□□□□ -0.59
CCL1-201ENST00000225842 DOK7Q18PE1 504 aa11.38□□□□□ -0.59
CCL1-201ENST00000225842 TUSC1Q2TAM9 212 aa11.38□□□□□ -0.59
CCL1-201ENST00000225842 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
CCL1-201ENST00000225842 CFAP43Q8NDM7 1665 aa11.37□□□□□ -0.59
CCL1-201ENST00000225842 HOXB3P14651 431 aaPredicted RBP11.37□□□□□ -0.59
CCL1-201ENST00000225842 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
CCL1-201ENST00000225842 TBC1D2BQ9UPU7 963 aa11.37□□□□□ -0.59
CCL1-201ENST00000225842 PCDHB15Q9Y5E8 787 aa11.37□□□□□ -0.59
CCL1-201ENST00000225842 DNAJB2P25686 324 aa11.36□□□□□ -0.59
CCL1-201ENST00000225842 RTL5Q5HYW3 569 aaPredicted RBP11.36□□□□□ -0.59
CCL1-201ENST00000225842 LHX6Q9UPM6 363 aa11.36□□□□□ -0.59
CCL1-201ENST00000225842 POM121CA8CG34 1229 aa11.35□□□□□ -0.59
CCL1-201ENST00000225842 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
CCL1-201ENST00000225842 AEBP1Q8IUX7 1158 aa11.35□□□□□ -0.59
CCL1-201ENST00000225842 RETREG2Q8NC44 543 aa11.35□□□□□ -0.59
CCL1-201ENST00000225842 CALR3Q96L12 384 aaKnown RBP11.35□□□□□ -0.59
CCL1-201ENST00000225842 PNMA3Q9UL41 463 aa11.35□□□□□ -0.59
CCL1-201ENST00000225842 RIMS1Q86UR5 1692 aaKnown RBP11.34□□□□□ -0.59
CCL1-201ENST00000225842 NUTM2BA6NNL0 878 aaPredicted RBP11.34□□□□□ -0.59
CCL1-201ENST00000225842 NUTM2EB1AL46 878 aaPredicted RBP11.34□□□□□ -0.59
CCL1-201ENST00000225842 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
CCL1-201ENST00000225842 LILRB3O75022 631 aa11.34□□□□□ -0.59
CCL1-201ENST00000225842 MLECQ14165 292 aa11.34□□□□□ -0.59
CCL1-201ENST00000225842 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
CCL1-201ENST00000225842 GPR153Q6NV75 609 aa11.34□□□□□ -0.59
CCL1-201ENST00000225842 NUTM2AQ8IVF1 878 aaPredicted RBP11.34□□□□□ -0.59
CCL1-201ENST00000225842 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
CCL1-201ENST00000225842 POGZQ7Z3K3 1410 aa11.34□□□□□ -0.59
CCL1-201ENST00000225842 NBPF26B4DH59 902 aa11.33□□□□□ -0.6
CCL1-201ENST00000225842 ZNF710Q8N1W2 664 aa11.33□□□□□ -0.6
CCL1-201ENST00000225842 RDH13Q8NBN7 331 aa11.33□□□□□ -0.6
CCL1-201ENST00000225842 TATDN2Q93075 761 aa11.33□□□□□ -0.6
CCL1-201ENST00000225842 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
CCL1-201ENST00000225842 PRM3Q9NNZ6 103 aa11.33□□□□□ -0.6
CCL1-201ENST00000225842 PPP1R3GB7ZBB8 358 aa11.32□□□□□ -0.6
CCL1-201ENST00000225842 USP17L8P0C7I0 530 aa11.32□□□□□ -0.6
CCL1-201ENST00000225842 GLMNQ92990 594 aa11.32□□□□□ -0.6
CCL1-201ENST00000225842 BCL2L12Q9HB09 334 aa11.32□□□□□ -0.6
CCL1-201ENST00000225842 KCTD17Q8N5Z5 321 aa11.31□□□□□ -0.6
CCL1-201ENST00000225842 ZSWIM6Q9HCJ5 1215 aa11.31□□□□□ -0.6
CCL1-201ENST00000225842 UBAP1LF5GYI3 381 aa11.3□□□□□ -0.6
CCL1-201ENST00000225842 SMAPO00193 183 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms