RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 GNL3LQ9NVN8 582 aaKnown RBP12.8□□□□□ -0.36
TRPS1-201ENST00000220888 TOM1L2Q6ZVM7 507 aa12.79□□□□□ -0.36
TRPS1-201ENST00000220888 BICD2Q8TD16 824 aa12.79□□□□□ -0.36
TRPS1-201ENST00000220888 OFD1O75665 1012 aa12.79□□□□□ -0.36
TRPS1-201ENST00000220888 WDHD1O75717 1129 aaPredicted RBP12.79□□□□□ -0.36
TRPS1-201ENST00000220888 HMOX1P09601 288 aa12.78□□□□□ -0.36
TRPS1-201ENST00000220888 NAP1L1P55209 391 aaKnown RBP12.78□□□□□ -0.36
TRPS1-201ENST00000220888 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRPS1-201ENST00000220888 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.36
TRPS1-201ENST00000220888 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.37
TRPS1-201ENST00000220888 ATP2B2Q01814 1243 aa12.77□□□□□ -0.37
TRPS1-201ENST00000220888 SMG6Q86US8 1419 aaKnown RBP12.77□□□□□ -0.37
TRPS1-201ENST00000220888 APAF1O14727 1248 aa12.77□□□□□ -0.37
TRPS1-201ENST00000220888 RDXP35241 583 aaKnown RBP12.77□□□□□ -0.37
TRPS1-201ENST00000220888 GPS2Q13227 327 aa12.76□□□□□ -0.37
TRPS1-201ENST00000220888 CNNM1Q9NRU3 951 aa12.76□□□□□ -0.37
TRPS1-201ENST00000220888 DDX54Q8TDD1 881 aaKnown RBP12.76□□□□□ -0.37
TRPS1-201ENST00000220888 DDX49Q9Y6V7 483 aaKnown RBP12.76□□□□□ -0.37
TRPS1-201ENST00000220888 GAS2L2Q8NHY3 880 aa12.76□□□□□ -0.37
TRPS1-201ENST00000220888 COG6Q9Y2V7 657 aa12.76□□□□□ -0.37
TRPS1-201ENST00000220888 ABCC8Q09428 1581 aa12.75□□□□□ -0.37
TRPS1-201ENST00000220888 VPS37CA5D8V6 355 aaPredicted RBP12.75□□□□□ -0.37
TRPS1-201ENST00000220888 DZIP1LQ8IYY4 767 aaKnown RBP12.75□□□□□ -0.37
TRPS1-201ENST00000220888 FOSBP53539 338 aa12.75□□□□□ -0.37
TRPS1-201ENST00000220888 CENPQQ7L2Z9 268 aaPredicted RBP12.75□□□□□ -0.37
TRPS1-201ENST00000220888 STAC3Q96MF2 364 aa12.75□□□□□ -0.37
TRPS1-201ENST00000220888 CDK5RAP3Q96JB5 506 aa12.75□□□□□ -0.37
TRPS1-201ENST00000220888 CABP4P57796 275 aa12.74□□□□□ -0.37
TRPS1-201ENST00000220888 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
TRPS1-201ENST00000220888 SMC3Q9UQE7 1217 aa12.74□□□□□ -0.37
TRPS1-201ENST00000220888 CCDC73Q6ZRK6 1079 aa12.74□□□□□ -0.37
TRPS1-201ENST00000220888 PRDM11Q9NQV5 511 aa12.74□□□□□ -0.37
TRPS1-201ENST00000220888 HSP90AB2PQ58FF8 381 aa12.74□□□□□ -0.37
TRPS1-201ENST00000220888 ANKLE2Q86XL3 938 aa12.74□□□□□ -0.37
TRPS1-201ENST00000220888 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
TRPS1-201ENST00000220888 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
TRPS1-201ENST00000220888 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
TRPS1-201ENST00000220888 MYO15BQ96JP2 1530 aa12.73□□□□□ -0.37
TRPS1-201ENST00000220888 SETQ01105 290 aaPredicted RBP12.73□□□□□ -0.37
TRPS1-201ENST00000220888 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
TRPS1-201ENST00000220888 KRT18P05783 430 aaKnown RBP12.72□□□□□ -0.37
TRPS1-201ENST00000220888 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
TRPS1-201ENST00000220888 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
TRPS1-201ENST00000220888 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
TRPS1-201ENST00000220888 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
TRPS1-201ENST00000220888 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
TRPS1-201ENST00000220888 CDR1P51861 262 aa12.72□□□□□ -0.37
TRPS1-201ENST00000220888 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
TRPS1-201ENST00000220888 INTS3Q68E01 1043 aaKnown RBP12.71□□□□□ -0.37
TRPS1-201ENST00000220888 CLASRPQ8N2M8 674 aaKnown RBP12.71□□□□□ -0.37
TRPS1-201ENST00000220888 SPG7Q9UQ90 795 aa12.71□□□□□ -0.37
TRPS1-201ENST00000220888 SKOR2Q2VWA4 1001 aaPredicted RBP12.71□□□□□ -0.38
TRPS1-201ENST00000220888 RRP12Q5JTH9 1297 aaKnown RBP12.71□□□□□ -0.38
TRPS1-201ENST00000220888 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.38
TRPS1-201ENST00000220888 DNAJC2Q99543 621 aaKnown RBP12.71□□□□□ -0.38
TRPS1-201ENST00000220888 TMOD2Q9NZR1 351 aa12.71□□□□□ -0.38
TRPS1-201ENST00000220888 NINLQ9Y2I6 1382 aa12.7□□□□□ -0.38
TRPS1-201ENST00000220888 USP47Q96K76 1375 aa12.7□□□□□ -0.38
TRPS1-201ENST00000220888 TTC39AQ5SRH9 613 aa12.7□□□□□ -0.38
TRPS1-201ENST00000220888 HOMER1Q86YM7 354 aa12.7□□□□□ -0.38
TRPS1-201ENST00000220888 SYCP1Q15431 976 aa12.7□□□□□ -0.38
TRPS1-201ENST00000220888 MPHOSPH8Q99549 860 aa12.7□□□□□ -0.38
TRPS1-201ENST00000220888 DEKP35659 375 aaKnown RBP12.69□□□□□ -0.38
TRPS1-201ENST00000220888 PSMA5P28066 241 aa12.69□□□□□ -0.38
TRPS1-201ENST00000220888 TMEM132EQ6IEE7 984 aa12.69□□□□□ -0.38
TRPS1-201ENST00000220888 SASS6Q6UVJ0 657 aa12.69□□□□□ -0.38
TRPS1-201ENST00000220888 GNAI3P08754 354 aa12.69□□□□□ -0.38
TRPS1-201ENST00000220888 TXLNAP40222 546 aa12.69□□□□□ -0.38
TRPS1-201ENST00000220888 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRPS1-201ENST00000220888 OLFM4Q6UX06 510 aa12.69□□□□□ -0.38
TRPS1-201ENST00000220888 ZNF592Q92610 1267 aa12.69□□□□□ -0.38
TRPS1-201ENST00000220888 KDM4AO75164 1064 aa12.68□□□□□ -0.38
TRPS1-201ENST00000220888 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
TRPS1-201ENST00000220888 FAM161AQ3B820 660 aa12.68□□□□□ -0.38
TRPS1-201ENST00000220888 NACAP1Q9BZK3 213 aa12.68□□□□□ -0.38
TRPS1-201ENST00000220888 RBM19Q9Y4C8 960 aaKnown RBP12.68□□□□□ -0.38
TRPS1-201ENST00000220888 POGZQ7Z3K3 1410 aa12.68□□□□□ -0.38
TRPS1-201ENST00000220888 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
TRPS1-201ENST00000220888 PDCL3Q9H2J4 239 aa12.67□□□□□ -0.38
TRPS1-201ENST00000220888 RUFY1Q96T51 708 aa12.67□□□□□ -0.38
TRPS1-201ENST00000220888 SURF6O75683 361 aaKnown RBP12.67□□□□□ -0.38
TRPS1-201ENST00000220888 MROH2BQ7Z745 1585 aa12.67□□□□□ -0.38
TRPS1-201ENST00000220888 IBSPP21815 317 aaPredicted RBP12.66□□□□□ -0.38
TRPS1-201ENST00000220888 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
TRPS1-201ENST00000220888 BICDL1Q6ZP65 573 aa12.65□□□□□ -0.38
TRPS1-201ENST00000220888 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
TRPS1-201ENST00000220888 ZNF530Q6P9A1 599 aaPredicted RBP12.65□□□□□ -0.38
TRPS1-201ENST00000220888 PNISRQ8TF01 805 aaKnown RBP12.65□□□□□ -0.38
TRPS1-201ENST00000220888 IPO9Q96P70 1041 aaKnown RBP12.65□□□□□ -0.38
TRPS1-201ENST00000220888 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
TRPS1-201ENST00000220888 HIP1O00291 1037 aa12.65□□□□□ -0.38
TRPS1-201ENST00000220888 CRBNQ96SW2 442 aa12.65□□□□□ -0.39
TRPS1-201ENST00000220888 SDF4Q9BRK5 362 aa12.64□□□□□ -0.39
TRPS1-201ENST00000220888 MTHFSP49914 203 aa12.64□□□□□ -0.39
TRPS1-201ENST00000220888 TTLL12Q14166 644 aaPredicted RBP12.63□□□□□ -0.39
TRPS1-201ENST00000220888 CCDC57Q2TAC2 916 aa12.63□□□□□ -0.39
TRPS1-201ENST00000220888 MAGEC2Q9UBF1 373 aaPredicted RBP12.63□□□□□ -0.39
TRPS1-201ENST00000220888 MYO6Q9UM54 1294 aa12.63□□□□□ -0.39
TRPS1-201ENST00000220888 NAT10Q9H0A0 1025 aaKnown RBP12.63□□□□□ -0.39
TRPS1-201ENST00000220888 AK7Q96M32 723 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms