RNA–Protein interactions for RNA: ENST00000216416.8

CNIH1-201, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNIH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-201ENST00000216416 PPP6R1Q9UPN7 881 aa8.86□□□□□ -0.99
CNIH1-201ENST00000216416 CDCA8Q53HL2 280 aa8.85□□□□□ -0.99
CNIH1-201ENST00000216416 THEMISQ8N1K5 641 aaPredicted RBP8.85□□□□□ -0.99
CNIH1-201ENST00000216416 MTHFSP49914 203 aa8.85□□□□□ -0.99
CNIH1-201ENST00000216416 STAC3Q96MF2 364 aa8.85□□□□□ -0.99
CNIH1-201ENST00000216416 NME9Q86XW9 330 aa8.85□□□□□ -0.99
CNIH1-201ENST00000216416 ZBTB7CA1YPR0 619 aa8.84□□□□□ -0.99
CNIH1-201ENST00000216416 NUDT16Q96DE0 195 aaKnown RBP8.84□□□□□ -0.99
CNIH1-201ENST00000216416 ALKQ9UM73 1620 aa8.84□□□□□ -0.99
CNIH1-201ENST00000216416 PRR36Q9H6K5 1346 aa8.84□□□□□ -0.99
CNIH1-201ENST00000216416 NRXN1Q9ULB1 1477 aa8.84□□□□□ -1
CNIH1-201ENST00000216416 GOLGB1Q14789 3259 aaKnown RBP8.83□□□□□ -1
CNIH1-201ENST00000216416 IQGAP1P46940 1657 aa8.83□□□□□ -1
CNIH1-201ENST00000216416 U2SURPO15042 1029 aaKnown RBP8.83□□□□□ -1
CNIH1-201ENST00000216416 RRS1Q15050 365 aaKnown RBP8.83□□□□□ -1
CNIH1-201ENST00000216416 RALBP1Q15311 655 aa8.83□□□□□ -1
CNIH1-201ENST00000216416 LMOD2Q6P5Q4 547 aa8.83□□□□□ -1
CNIH1-201ENST00000216416 DDX17Q92841 729 aaKnown RBP8.83□□□□□ -1
CNIH1-201ENST00000216416 A0A1W2PP64 1363 aa8.83□□□□□ -1
CNIH1-201ENST00000216416 IFT172Q9UG01 1749 aa8.83□□□□□ -1
CNIH1-201ENST00000216416 SRCAPQ6ZRS2 3230 aa8.83□□□□□ -1
CNIH1-201ENST00000216416 SPATA31D1Q6ZQQ2 1576 aa8.83□□□□□ -1
CNIH1-201ENST00000216416 FYB1O15117 783 aa8.82□□□□□ -1
CNIH1-201ENST00000216416 WASLO00401 505 aaPredicted RBP8.82□□□□□ -1
CNIH1-201ENST00000216416 PAK3O75914 559 aaPredicted RBP8.82□□□□□ -1
CNIH1-201ENST00000216416 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.82□□□□□ -1
CNIH1-201ENST00000216416 ZFYVE9O95405 1425 aa8.82□□□□□ -1
CNIH1-201ENST00000216416 APAF1O14727 1248 aa8.82□□□□□ -1
CNIH1-201ENST00000216416 PARD3Q8TEW0 1356 aa8.82□□□□□ -1
CNIH1-201ENST00000216416 RIMS1Q86UR5 1692 aaKnown RBP8.81□□□□□ -1
CNIH1-201ENST00000216416 WDR43Q15061 677 aaKnown RBP eCLIP8.81□□□□□ -1
CNIH1-201ENST00000216416 DMRT2Q9Y5R5 561 aa8.81□□□□□ -1
CNIH1-201ENST00000216416 TULP4Q9NRJ4 1543 aa8.81□□□□□ -1
CNIH1-201ENST00000216416 PTPRUQ92729 1446 aa8.81□□□□□ -1
CNIH1-201ENST00000216416 C3P01024 1663 aa8.81□□□□□ -1
CNIH1-201ENST00000216416 HDGFP51858 240 aaKnown RBP8.81□□□□□ -1
CNIH1-201ENST00000216416 ANKLE2Q86XL3 938 aa8.81□□□□□ -1
CNIH1-201ENST00000216416 ADAMTS13Q76LX8 1427 aa8.81□□□□□ -1
CNIH1-201ENST00000216416 EMILIN1Q9Y6C2 1016 aa8.81□□□□□ -1
CNIH1-201ENST00000216416 KDM4FA0A1W2PPD8 638 aa8.8□□□□□ -1
CNIH1-201ENST00000216416 PLIN1O60240 522 aa8.8□□□□□ -1
CNIH1-201ENST00000216416 ZC3H13Q5T200 1668 aaKnown RBP8.8□□□□□ -1
CNIH1-201ENST00000216416 FER1L4A9Z1Z3 1794 aa8.8□□□□□ -1
CNIH1-201ENST00000216416 HMOX1P09601 288 aa8.8□□□□□ -1
CNIH1-201ENST00000216416 SPINK5Q9NQ38 1064 aaPredicted RBP8.8□□□□□ -1
CNIH1-201ENST00000216416 QRICH2Q9H0J4 1663 aa8.79□□□□□ -1
CNIH1-201ENST00000216416 U2AF1L5P0DN76 240 aaPredicted RBP8.79□□□□□ -1
CNIH1-201ENST00000216416 U2AF1Q01081 240 aaKnown RBP eCLIP8.79□□□□□ -1
CNIH1-201ENST00000216416 NGDNQ8NEJ9 315 aaKnown RBP8.79□□□□□ -1
CNIH1-201ENST00000216416 FOXO3O43524 673 aa8.78□□□□□ -1
CNIH1-201ENST00000216416 ORAI2Q96SN7 254 aa8.78□□□□□ -1
CNIH1-201ENST00000216416 CCDC61Q9Y6R9 512 aa8.78□□□□□ -1
CNIH1-201ENST00000216416 REREQ9P2R6 1566 aa8.78□□□□□ -1
CNIH1-201ENST00000216416 LRPPRCP42704 1394 aaKnown RBP8.78□□□□□ -1
CNIH1-201ENST00000216416 CGNL1Q0VF96 1302 aa8.78□□□□□ -1
CNIH1-201ENST00000216416 POLR1AO95602 1720 aaPredicted RBP8.78□□□□□ -1
CNIH1-201ENST00000216416 ACEP12821 1306 aa8.78□□□□□ -1
CNIH1-201ENST00000216416 HDGFL2Q7Z4V5 671 aaPredicted RBP8.78□□□□□ -1
CNIH1-201ENST00000216416 TERF2IPQ9NYB0 399 aa8.77□□□□□ -1
CNIH1-201ENST00000216416 LTV1Q96GA3 475 aaPredicted RBP8.77□□□□□ -1.01
CNIH1-201ENST00000216416 ARHGEF28Q8N1W1 1705 aaKnown RBP8.77□□□□□ -1.01
CNIH1-201ENST00000216416 ESCO1Q5FWF5 840 aa8.77□□□□□ -1.01
CNIH1-201ENST00000216416 SETD1BQ9UPS6 1966 aaKnown RBP8.77□□□□□ -1.01
CNIH1-201ENST00000216416 ABCC11Q96J66 1382 aa8.76□□□□□ -1.01
CNIH1-201ENST00000216416 UBR1Q8IWV7 1749 aa8.76□□□□□ -1.01
CNIH1-201ENST00000216416 BRD4O60885 1362 aaPredicted RBP8.76□□□□□ -1.01
CNIH1-201ENST00000216416 PPIP5K1Q6PFW1 1433 aa8.76□□□□□ -1.01
CNIH1-201ENST00000216416 MYOM1P52179 1685 aa8.76□□□□□ -1.01
CNIH1-201ENST00000216416 NRXN3Q9Y4C0 1643 aa8.75□□□□□ -1.01
CNIH1-201ENST00000216416 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
CNIH1-201ENST00000216416 THUMPD2Q9BTF0 503 aaKnown RBP8.75□□□□□ -1.01
CNIH1-201ENST00000216416 KDM5AP29375 1690 aaKnown RBP8.75□□□□□ -1.01
CNIH1-201ENST00000216416 TBX22Q9Y458 520 aa8.75□□□□□ -1.01
CNIH1-201ENST00000216416 ZBED9Q6R2W3 1325 aa8.75□□□□□ -1.01
CNIH1-201ENST00000216416 B4GALNT3Q6L9W6 998 aa8.75□□□□□ -1.01
CNIH1-201ENST00000216416 BCL2L13Q9BXK5 485 aa8.75□□□□□ -1.01
CNIH1-201ENST00000216416 ANKRD36BQ8N2N9 1353 aa8.74□□□□□ -1.01
CNIH1-201ENST00000216416 NEFLP07196 543 aa8.74□□□□□ -1.01
CNIH1-201ENST00000216416 SBNO2Q9Y2G9 1366 aa8.74□□□□□ -1.01
CNIH1-201ENST00000216416 LAMC1P11047 1609 aa8.74□□□□□ -1.01
CNIH1-201ENST00000216416 HSP90AB2PQ58FF8 381 aa8.73□□□□□ -1.01
CNIH1-201ENST00000216416 PLEKHG1Q9ULL1 1385 aa8.73□□□□□ -1.01
CNIH1-201ENST00000216416 SETBP1Q9Y6X0 1596 aa8.73□□□□□ -1.01
CNIH1-201ENST00000216416 POLKQ9UBT6 870 aa8.73□□□□□ -1.01
CNIH1-201ENST00000216416 CD163L1Q9NR16 1453 aa8.73□□□□□ -1.01
CNIH1-201ENST00000216416 NLRP6P59044 892 aa8.73□□□□□ -1.01
CNIH1-201ENST00000216416 SKAP1Q86WV1 359 aa8.73□□□□□ -1.01
CNIH1-201ENST00000216416 TCP11L2Q8N4U5 519 aa8.73□□□□□ -1.01
CNIH1-201ENST00000216416 KIAA1210Q9ULL0 1709 aa8.73□□□□□ -1.01
CNIH1-201ENST00000216416 TCERG1O14776 1098 aaKnown RBP8.72□□□□□ -1.01
CNIH1-201ENST00000216416 AEBP1Q8IUX7 1158 aa8.72□□□□□ -1.01
CNIH1-201ENST00000216416 LAS1LQ9Y4W2 734 aaKnown RBP8.72□□□□□ -1.01
CNIH1-201ENST00000216416 CABLES1Q8TDN4 633 aa8.72□□□□□ -1.01
CNIH1-201ENST00000216416 DCTN1Q14203 1278 aa8.72□□□□□ -1.01
CNIH1-201ENST00000216416 NLRP1Q9C000 1473 aa8.72□□□□□ -1.01
CNIH1-201ENST00000216416 ATAD2Q6PL18 1390 aa8.72□□□□□ -1.01
CNIH1-201ENST00000216416 ABTB2Q8N961 1025 aa8.72□□□□□ -1.01
CNIH1-201ENST00000216416 ELL2O00472 640 aaPredicted RBP8.71□□□□□ -1.02
CNIH1-201ENST00000216416 COG3Q96JB2 828 aa8.71□□□□□ -1.02
CNIH1-201ENST00000216416 PHACTR3Q96KR7 559 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms