RNA–Protein interactions for RNA: ENSMUST00000116375.1

Cstf1-201, Transcript of Cleavage stimulation factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cstf1, Length 3,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1-201ENSMUST00000116375 Skint5A7XUY5 1461 aa13.77□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Ehbp1l1Q99MS7 1716 aa13.77□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Uspl1Q3ULM6 1089 aa13.77□□□□□ -0.2
Cstf1-201ENSMUST00000116375 Prdm10Q3UTQ7 1184 aa13.77□□□□□ -0.2
Cstf1-201ENSMUST00000116375 B4galnt3Q6L8S8 986 aa13.77□□□□□ -0.2
Cstf1-201ENSMUST00000116375 KdrP35918 1367 aa13.77□□□□□ -0.2
Cstf1-201ENSMUST00000116375 AampJ3QN89 436 aa13.77□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Trpm1Q2TV84 1622 aa13.76□□□□□ -0.21
Cstf1-201ENSMUST00000116375 PalldQ9ET54 1408 aa13.76□□□□□ -0.21
Cstf1-201ENSMUST00000116375 GsdmaQ9EST1 446 aa13.76□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Akap12Q9WTQ5 1684 aa13.75□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Kiaa1107Q80TK0 1369 aa13.74□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Eif2ak4Q9QZ05 1648 aa13.74□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Smc5Q8CG46 1101 aaKnown RBP13.74□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Cdc42bpgQ80UW5 1551 aa13.73□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Cald1E9QA15 768 aaKnown RBP13.73□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Hsp90aa1P07901 733 aaKnown RBP13.73□□□□□ -0.21
Cstf1-201ENSMUST00000116375 CanxP35564 591 aaKnown RBP13.73□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Ppm1gQ61074 542 aa13.72□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Lrrc7Q80TE7 1490 aa13.72□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Plxnc1Q9QZC2 1574 aa13.72□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Dbr1Q923B1 550 aa13.72□□□□□ -0.21
Cstf1-201ENSMUST00000116375 NudcO35685 332 aaKnown RBP13.71□□□□□ -0.21
Cstf1-201ENSMUST00000116375 ChgaP26339 463 aaKnown RBP13.71□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Exosc9Q9JHI7 438 aaKnown RBP13.71□□□□□ -0.21
Cstf1-201ENSMUST00000116375 IbtkQ6ZPR6 1352 aaKnown RBP13.71□□□□□ -0.21
Cstf1-201ENSMUST00000116375 Trim58Q5NCC9 485 aa13.71□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Myom1Q62234 1667 aaKnown RBP13.71□□□□□ -0.22
Cstf1-201ENSMUST00000116375 MaddQ80U28 1577 aa13.7□□□□□ -0.22
Cstf1-201ENSMUST00000116375 AglF8VPN4 1532 aa13.7□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Hfm1D3Z4R1 1434 aa13.7□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Ptch1Q61115 1434 aa13.7□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Pabpn1Q8CCS6 302 aaKnown RBP13.7□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Sipa1l1Q8C0T5 1782 aa13.7□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Ino80Q6ZPV2 1559 aa13.7□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Scaf11E9PZM7 1456 aaKnown RBP13.69□□□□□ -0.22
Cstf1-201ENSMUST00000116375 AU022751B1B0V2 589 aa13.69□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Iqcf3Q9D498 203 aa13.69□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Adgrl3Q80TS3 1537 aa13.68□□□□□ -0.22
Cstf1-201ENSMUST00000116375 4933416C03RikQ3V063 378 aa13.68□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Ncbp3Q8BZR9 615 aaKnown RBP13.68□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Dnai1Q8C0M8 701 aa13.68□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Atp1b4Q99ME6 356 aa13.67□□□□□ -0.22
Cstf1-201ENSMUST00000116375 U2af1Q9D883 239 aaKnown RBP13.67□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Tsen2Q6P7W5 460 aa13.66□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Trim30dE9PWL0 497 aa13.66□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Mroh1E0CZ22 1640 aa13.65□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Ipo8Q7TMY7 1010 aa13.65□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Rsph4aQ8BYM7 716 aa13.65□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Polr3glQ8R0C0 218 aa13.65□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Ciz1Q8VEH2 845 aa13.65□□□□□ -0.22
Cstf1-201ENSMUST00000116375 Ccar1Q8CH18 1146 aaKnown RBP13.65□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Pank1Q8K4K6 548 aa13.65□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Nkx1-2P42580 305 aa13.64□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Fam135bQ9DAI6 1403 aa13.64□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Tspyl2Q7TQI8 677 aa13.63□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Knl1Q66JQ7 1612 aa13.63□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Stk26Q99JT2 416 aa13.63□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Dip2cE9PWR4 1557 aa13.63□□□□□ -0.23
Cstf1-201ENSMUST00000116375 RereQ80TZ9 1558 aa13.63□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Ksr2Q3UVC0 959 aa13.63□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Mre11Q61216 706 aa13.63□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Iqsec2Q5DU25 1478 aa13.63□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Adamts7Q68SA9 1657 aa13.62□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Tmc1Q8R4P5 757 aa13.62□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Prdm2A2A7B5 1709 aaKnown RBP13.62□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Znf521Q6KAS7 1311 aa13.61□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Hsp90ab1P11499 724 aaKnown RBP13.61□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Shq1Q7TMX5 569 aa13.61□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Atxn3Q9CVD2 355 aa13.61□□□□□ -0.23
Cstf1-201ENSMUST00000116375 P2rx7Q9Z1M0 595 aa13.6□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Ttc37F8VPK0 1563 aa13.6□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Ift172Q6VH22 1749 aa13.6□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Gas2l2Q5SSG4 860 aa13.6□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Cfap65Q3V0B4 1847 aa13.6□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Gsto1O09131 240 aa13.6□□□□□ -0.23
Cstf1-201ENSMUST00000116375 DaxxO35613 739 aa13.6□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Apaf1O88879 1249 aa13.6□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Med14A2ABV5 1459 aaKnown RBP13.59□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Arhgap23Q69ZH9 1483 aa13.59□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Prrc2bQ7TPM1 1486 aaKnown RBP13.59□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Gm156Q58A37 223 aa13.59□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Ak7Q9D2H2 614 aa13.59□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Sart3Q9JLI8 962 aaKnown RBP13.59□□□□□ -0.23
Cstf1-201ENSMUST00000116375 AdgbG3UZ78 1657 aa13.58□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Adgrl1Q80TR1 1466 aa13.58□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Nrxn1Q9CS84 1514 aa13.58□□□□□ -0.23
Cstf1-201ENSMUST00000116375 Ccdc183A2AJB1 534 aa13.58□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Kiaa0556Q8C753 1610 aa13.58□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Atl3Q91YH5 541 aa13.57□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Trim26Q99PN3 545 aa13.57□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Duxf3A0A0N4SV92 674 aa13.56□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Dusp27Q148W8 1138 aa13.56□□□□□ -0.24
Cstf1-201ENSMUST00000116375 4930567H17RikQ3V0K5 233 aa13.56□□□□□ -0.24
Cstf1-201ENSMUST00000116375 FanciQ8K368 1330 aa13.56□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Utp14aQ640M1 767 aaKnown RBP13.56□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Cavin4A2AMM0 362 aa13.55□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Ppp2r3aB2RXC8 1150 aa13.54□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Ahdc1Q6PAL7 1594 aaKnown RBP13.54□□□□□ -0.24
Cstf1-201ENSMUST00000116375 Atp2b2Q9R0K7 1198 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms