RNA–Protein interactions for RNA: ENSMUST00000112519.8

Chfr-202, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chfr, Length 3,159 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-202ENSMUST00000112519 Plppr3Q7TPB0 716 aa17.19■□□□□ 0.34
Chfr-202ENSMUST00000112519 Mroh1E0CZ22 1640 aa17.19■□□□□ 0.34
Chfr-202ENSMUST00000112519 IqubQ8CDK3 788 aa17.18■□□□□ 0.34
Chfr-202ENSMUST00000112519 Uggt1Q6P5E4 1551 aa17.18■□□□□ 0.34
Chfr-202ENSMUST00000112519 DnmbpQ6TXD4 1580 aa17.18■□□□□ 0.34
Chfr-202ENSMUST00000112519 Kif16bB1AVY7 1312 aa17.18■□□□□ 0.34
Chfr-202ENSMUST00000112519 Prrc2bQ7TPM1 1486 aaKnown RBP17.18■□□□□ 0.34
Chfr-202ENSMUST00000112519 Ipo9Q91YE6 1041 aa17.17■□□□□ 0.34
Chfr-202ENSMUST00000112519 PalldQ9ET54 1408 aa17.17■□□□□ 0.34
Chfr-202ENSMUST00000112519 Q9D9H8 365 aa17.17■□□□□ 0.34
Chfr-202ENSMUST00000112519 Mink1Q9JM52 1308 aa17.16■□□□□ 0.34
Chfr-202ENSMUST00000112519 Dnajc5gQ8C632 165 aa17.16■□□□□ 0.34
Chfr-202ENSMUST00000112519 Ttc37F8VPK0 1563 aa17.16■□□□□ 0.34
Chfr-202ENSMUST00000112519 Speer4f1Q9D5Q6 258 aa17.16■□□□□ 0.34
Chfr-202ENSMUST00000112519 Myom1Q62234 1667 aaKnown RBP17.15■□□□□ 0.34
Chfr-202ENSMUST00000112519 Polr3glQ8R0C0 218 aa17.15■□□□□ 0.34
Chfr-202ENSMUST00000112519 Synj2Q9D2G5 1434 aa17.14■□□□□ 0.33
Chfr-202ENSMUST00000112519 Hecw2Q6I6G8 1578 aa17.13■□□□□ 0.33
Chfr-202ENSMUST00000112519 ArxO35085 564 aa17.13■□□□□ 0.33
Chfr-202ENSMUST00000112519 Arid4bA2CG63 1314 aaKnown RBP17.13■□□□□ 0.33
Chfr-202ENSMUST00000112519 Qser1A2BIE1 1698 aa17.12■□□□□ 0.33
Chfr-202ENSMUST00000112519 P2rx7Q9Z1M0 595 aa17.12■□□□□ 0.33
Chfr-202ENSMUST00000112519 Ahdc1Q6PAL7 1594 aaKnown RBP17.12■□□□□ 0.33
Chfr-202ENSMUST00000112519 Plxnc1Q9QZC2 1574 aa17.12■□□□□ 0.33
Chfr-202ENSMUST00000112519 Slc52a2Q9D8F3 450 aa17.12■□□□□ 0.33
Chfr-202ENSMUST00000112519 Hfm1D3Z4R1 1434 aa17.12■□□□□ 0.33
Chfr-202ENSMUST00000112519 PtprmP28828 1452 aa17.12■□□□□ 0.33
Chfr-202ENSMUST00000112519 Ecm2Q5FW85 670 aa17.12■□□□□ 0.33
Chfr-202ENSMUST00000112519 Exosc9Q9JHI7 438 aaKnown RBP17.12■□□□□ 0.33
Chfr-202ENSMUST00000112519 Asxl2Q8BZ32 1370 aa17.11■□□□□ 0.33
Chfr-202ENSMUST00000112519 Adamts7Q68SA9 1657 aa17.11■□□□□ 0.33
Chfr-202ENSMUST00000112519 Ccdc27Q3V036 639 aa17.11■□□□□ 0.33
Chfr-202ENSMUST00000112519 Kiaa1107Q80TK0 1369 aa17.11■□□□□ 0.33
Chfr-202ENSMUST00000112519 Cep170bQ80U49 1574 aa17.1■□□□□ 0.33
Chfr-202ENSMUST00000112519 Ttll13A4Q9F6 804 aa17.1■□□□□ 0.33
Chfr-202ENSMUST00000112519 Rangap1P46061 589 aaKnown RBP17.1■□□□□ 0.33
Chfr-202ENSMUST00000112519 Trim26Q99PN3 545 aa17.1■□□□□ 0.33
Chfr-202ENSMUST00000112519 Prkrip1Q9CWV6 186 aaKnown RBP17.1■□□□□ 0.33
Chfr-202ENSMUST00000112519 Usp19Q3UJD6 1360 aa17.09■□□□□ 0.33
Chfr-202ENSMUST00000112519 CenpjQ569L8 1344 aa17.09■□□□□ 0.33
Chfr-202ENSMUST00000112519 Rwdd1Q9CQK7 243 aa17.09■□□□□ 0.33
Chfr-202ENSMUST00000112519 Atf7ipQ7TT18 1306 aa17.08■□□□□ 0.33
Chfr-202ENSMUST00000112519 CltcQ68FD5 1675 aaKnown RBP17.08■□□□□ 0.32
Chfr-202ENSMUST00000112519 Gas2l2Q5SSG4 860 aa17.08■□□□□ 0.32
Chfr-202ENSMUST00000112519 Utp14aQ640M1 767 aaKnown RBP17.08■□□□□ 0.32
Chfr-202ENSMUST00000112519 Ift172Q6VH22 1749 aa17.08■□□□□ 0.32
Chfr-202ENSMUST00000112519 Kif13aQ9EQW7 1749 aa17.08■□□□□ 0.32
Chfr-202ENSMUST00000112519 DaxxO35613 739 aa17.08■□□□□ 0.32
Chfr-202ENSMUST00000112519 Golga2Q921M4 999 aa17.08■□□□□ 0.32
Chfr-202ENSMUST00000112519 CanxP35564 591 aaKnown RBP17.07■□□□□ 0.32
Chfr-202ENSMUST00000112519 InsrP15208 1372 aa17.06■□□□□ 0.32
Chfr-202ENSMUST00000112519 Gprasp1Q5U4C1 1347 aa17.05■□□□□ 0.32
Chfr-202ENSMUST00000112519 MaddQ80U28 1577 aa17.05■□□□□ 0.32
Chfr-202ENSMUST00000112519 Ercc6l2Q9JIM3 1537 aa17.05■□□□□ 0.32
Chfr-202ENSMUST00000112519 Amer1Q7TS75 1132 aa17.04■□□□□ 0.32
Chfr-202ENSMUST00000112519 Armcx1Q9CX83 456 aa17.04■□□□□ 0.32
Chfr-202ENSMUST00000112519 4933416C03RikQ3V063 378 aa17.04■□□□□ 0.32
Chfr-202ENSMUST00000112519 Ccdc30Q8BVF4 654 aa17.04■□□□□ 0.32
Chfr-202ENSMUST00000112519 Atp2b2Q9R0K7 1198 aa17.03■□□□□ 0.32
Chfr-202ENSMUST00000112519 NpatQ8BMA5 1420 aa17.03■□□□□ 0.32
Chfr-202ENSMUST00000112519 4930567H17RikQ3V0K5 233 aa17.03■□□□□ 0.32
Chfr-202ENSMUST00000112519 Chmp5Q9D7S9 219 aa17.03■□□□□ 0.32
Chfr-202ENSMUST00000112519 Atxn3Q9CVD2 355 aa17.03■□□□□ 0.32
Chfr-202ENSMUST00000112519 Scaf11E9PZM7 1456 aaKnown RBP17.02■□□□□ 0.32
Chfr-202ENSMUST00000112519 Naip7Q9JIB3 1402 aa17.02■□□□□ 0.32
Chfr-202ENSMUST00000112519 Cald1E9QA15 768 aaKnown RBP17.01■□□□□ 0.31
Chfr-202ENSMUST00000112519 Apaf1O88879 1249 aa17.01■□□□□ 0.31
Chfr-202ENSMUST00000112519 Znf316Q6PGE4 1016 aa17.01■□□□□ 0.31
Chfr-202ENSMUST00000112519 IbtkQ6ZPR6 1352 aaKnown RBP17.01■□□□□ 0.31
Chfr-202ENSMUST00000112519 Cdk19Q8BWD8 501 aa17■□□□□ 0.31
Chfr-202ENSMUST00000112519 GsdmaQ9EST1 446 aa17■□□□□ 0.31
Chfr-202ENSMUST00000112519 Trim30dE9PWL0 497 aa16.99■□□□□ 0.31
Chfr-202ENSMUST00000112519 Itsn1Q9Z0R4 1714 aa16.99■□□□□ 0.31
Chfr-202ENSMUST00000112519 Uspl1Q3ULM6 1089 aa16.99■□□□□ 0.31
Chfr-202ENSMUST00000112519 Arhgap23Q69ZH9 1483 aa16.98■□□□□ 0.31
Chfr-202ENSMUST00000112519 Gsto1O09131 240 aa16.97■□□□□ 0.31
Chfr-202ENSMUST00000112519 U2af1Q9D883 239 aaKnown RBP16.97■□□□□ 0.31
Chfr-202ENSMUST00000112519 Arhgef28P97433 1693 aa16.97■□□□□ 0.31
Chfr-202ENSMUST00000112519 Txndc2Q6P902 515 aa16.97■□□□□ 0.31
Chfr-202ENSMUST00000112519 Tspyl2Q7TQI8 677 aa16.96■□□□□ 0.31
Chfr-202ENSMUST00000112519 IghaA0A0A6YXW6 389 aa16.96■□□□□ 0.31
Chfr-202ENSMUST00000112519 Tsen2Q6P7W5 460 aa16.95■□□□□ 0.3
Chfr-202ENSMUST00000112519 Plekhh1Q80TI1 1356 aa16.95■□□□□ 0.3
Chfr-202ENSMUST00000112519 Hsp90aa1P07901 733 aaKnown RBP16.95■□□□□ 0.3
Chfr-202ENSMUST00000112519 Pank1Q8K4K6 548 aa16.95■□□□□ 0.3
Chfr-202ENSMUST00000112519 Abca14E9Q8F8 1683 aa16.94■□□□□ 0.3
Chfr-202ENSMUST00000112519 NinlQ6ZQ12 1394 aa16.94■□□□□ 0.3
Chfr-202ENSMUST00000112519 Psme1P97371 249 aa16.94■□□□□ 0.3
Chfr-202ENSMUST00000112519 EspnQ9ET47 871 aa16.94■□□□□ 0.3
Chfr-202ENSMUST00000112519 Iqcf3Q9D498 203 aa16.93■□□□□ 0.3
Chfr-202ENSMUST00000112519 Sart3Q9JLI8 962 aaKnown RBP16.91■□□□□ 0.3
Chfr-202ENSMUST00000112519 Nrxn1Q9CS84 1514 aa16.91■□□□□ 0.3
Chfr-202ENSMUST00000112519 RictorQ6QI06 1708 aa16.9■□□□□ 0.3
Chfr-202ENSMUST00000112519 Mbd3Q9Z2D8 285 aaKnown RBP16.9■□□□□ 0.3
Chfr-202ENSMUST00000112519 KdrP35918 1367 aa16.89■□□□□ 0.3
Chfr-202ENSMUST00000112519 Eif2ak4Q9QZ05 1648 aa16.89■□□□□ 0.29
Chfr-202ENSMUST00000112519 Map4k4P97820 1233 aaKnown RBP16.89■□□□□ 0.29
Chfr-202ENSMUST00000112519 Ttc41Q692V3 1318 aa16.88■□□□□ 0.29
Chfr-202ENSMUST00000112519 Ralbp1Q62172 648 aa16.88■□□□□ 0.29
Chfr-202ENSMUST00000112519 Rsph4aQ8BYM7 716 aa16.87■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms