RNA–Protein interactions for RNA: ENSMUST00000087050.6

Col4a4-201, Transcript of Collagen alpha-4(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a4, Length 10,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4-201ENSMUST00000087050 AppP12023 770 aa11.9□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Arid4aF8VPQ2 1261 aaKnown RBP11.9□□□□□ -0.51
Col4a4-201ENSMUST00000087050 March6Q6ZQ89 909 aa11.89□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Rbm10Q99KG3 930 aaKnown RBP11.89□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Txndc2Q6P902 515 aa11.89□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Ccdc83Q9D4V3 305 aa11.89□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Polr3gQ6NXY9 223 aa11.89□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Cyp46a1Q9WVK8 500 aa11.89□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Gsdma3Q5Y4Y6 464 aa11.89□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Med4Q9CQA5 270 aa11.89□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Efcab5A0JP43 1406 aa11.89□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Hnrnpul1Q8VDM6 859 aaKnown RBP11.88□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Q9D2X8 372 aa11.88□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Bag1Q60739 355 aa11.88□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Ccdc30Q8BVF4 654 aa11.88□□□□□ -0.51
Col4a4-201ENSMUST00000087050 ScaperF8VQ70 1398 aaKnown RBP11.88□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Ercc6lQ8BHK9 1240 aa11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Gcc1Q9D4H2 778 aa11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 ErbinQ80TH2 1402 aa11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 NexnQ7TPW1 607 aa11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Otud6bQ8K2H2 294 aa11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Mad1l1Q9WTX8 717 aaKnown RBP11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 FanciQ8K368 1330 aa11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Triml2E9PW10 424 aa11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Arglu1Q3UL36 271 aaKnown RBP11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Spag5Q7TME2 1165 aa11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Inpp5dQ9ES52 1191 aa11.87□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Pibf1E9Q6K3 756 aa11.86□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Rab3gap2Q8BMG7 1366 aa11.86□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Map9Q3TRR0 646 aa11.86□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Hmox1P14901 289 aa11.86□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Zkscan2G3X952 960 aa11.86□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Nap1l1P28656 391 aaKnown RBP11.85□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Stim1P70302 685 aa11.85□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Ccp110Q7TSH4 1004 aa11.85□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Fan1Q69ZT1 1020 aa11.85□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Cavin1O54724 392 aa11.85□□□□□ -0.51
Col4a4-201ENSMUST00000087050 SrrtQ99MR6 875 aaKnown RBP11.85□□□□□ -0.51
Col4a4-201ENSMUST00000087050 SelenooQ9DBC0 667 aa11.85□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Ccdc96Q9CR92 584 aa11.85□□□□□ -0.51
Col4a4-201ENSMUST00000087050 NinlQ6ZQ12 1394 aa11.84□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Gbp4Q61107 620 aa11.84□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Lrrc45Q8CIM1 670 aa11.84□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Ric3Q8BPM6 367 aa11.84□□□□□ -0.51
Col4a4-201ENSMUST00000087050 MicalclQ9D5U9 680 aa11.84□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Me1P06801 572 aa11.84□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Eif3aP23116 1344 aaKnown RBP11.84□□□□□ -0.51
Col4a4-201ENSMUST00000087050 PogkQ80TC5 607 aa11.83□□□□□ -0.51
Col4a4-201ENSMUST00000087050 Chmp7Q8R1T1 451 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Gtf3c5Q8R2T8 520 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 BbxQ8VBW5 907 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 PnisrA2AJT4 805 aaKnown RBP11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 CrcpO35427 148 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 LarsQ8BMJ2 1178 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 CenpqQ9CPQ5 267 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Top2aQ01320 1528 aaKnown RBP11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Ttll13A4Q9F6 804 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Kif3bQ61771 747 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 DmtnQ9WV69 405 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 NcapgE9PWG6 1004 aa11.83□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Paxip1Q6NZQ4 1056 aa11.82□□□□□ -0.52
Col4a4-201ENSMUST00000087050 TnmdQ9EP64 317 aa11.82□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Swt1Q9DBQ9 907 aa11.82□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Sox12Q04890 314 aa11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Ppp1r18Q8BQ30 594 aa11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 KarsQ99MN1 595 aaKnown RBP11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 A0A0U1RNP2 1173 aa11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Samd1D3YXK1 519 aa11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Pdcl2Q78Y63 240 aa11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Map3k1P53349 1493 aa11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Gnl3lQ6PGG6 577 aaKnown RBP11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Cc2d2bA0A286YDU8 1405 aa11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Utp14aQ640M1 767 aaKnown RBP11.81□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Nek4Q9Z1J2 792 aa11.8□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Ccdc102aQ3TMW1 549 aa11.8□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Pmfbp1Q9WVQ0 1022 aa11.8□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Sptbn5F6UCX4 1208 aa11.8□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Trap1aP19473 224 aa11.8□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Cdkl5Q3UTQ8 938 aa11.8□□□□□ -0.52
Col4a4-201ENSMUST00000087050 ItpripQ3TNL8 555 aa11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Usp40Q8BWR4 1235 aa11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Prm3Q62100 101 aa11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Rhot2Q8JZN7 620 aa11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Stk38Q91VJ4 465 aa11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Rbm25B2RY56 838 aaKnown RBP11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 NefhP19246 1090 aa11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Usp16Q99LG0 825 aa11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Dusp27Q148W8 1138 aa11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Rnf214Q8BFU3 668 aaKnown RBP11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Dhx16G3X8X0 1044 aaKnown RBP11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Znf710Q3U288 666 aa11.79□□□□□ -0.52
Col4a4-201ENSMUST00000087050 CastP51125 788 aa11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 TxlnaQ6PAM1 554 aaKnown RBP11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Cabp4Q8VHC5 271 aa11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Krt85Q9Z2T6 507 aa11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Ift140E9PY46 1464 aa11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Lrrfip1Q3UZ39 729 aaKnown RBP11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Usp48Q3V0C5 1052 aa11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Sv2bQ8BG39 683 aa11.78□□□□□ -0.52
Col4a4-201ENSMUST00000087050 Q8C5K5 320 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms